Experiment set3IT086 for Dyella japonica UNC79MFTsu3.2

Compare to:

L-Asparagine nitrogen source

200 most important genes:

  gene name fitness t score description  
ABZR86_RS00285 -6.4 -2.4 hypothetical protein compare
ABZR86_RS19935 -6.3 -1.4 hypothetical protein compare
ABZR86_RS07340 -6.2 -2.3 tRNA-Leu compare
ABZR86_RS21285 -6.2 -2.3 hypothetical protein compare
ABZR86_RS08250 -6.0 -2.6 phosphate signaling complex protein PhoU compare
ABZR86_RS10310 -5.8 -1.3 hypothetical protein compare
ABZR86_RS06270 -5.7 -6.0 glycosyltransferase family 9 protein compare
ABZR86_RS07660 -5.7 -3.9 exodeoxyribonuclease V subunit gamma compare
ABZR86_RS20860 -5.7 -2.1 transcriptional regulator GcvA compare
ABZR86_RS18805 -5.6 -2.1 hypothetical protein compare
ABZR86_RS19725 -5.4 -14.7 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABZR86_RS09635 -5.3 -3.5 phosphoglycerate dehydrogenase compare
ABZR86_RS09935 -5.2 -2.0 DUF4105 domain-containing protein compare
ABZR86_RS09345 -5.2 -1.1 hypothetical protein compare
ABZR86_RS20820 -5.1 -1.1 CsbD family protein compare
ABZR86_RS13920 -5.1 -12.8 CDP-glycerol glycerophosphotransferase family protein compare
ABZR86_RS02215 -5.0 -2.9 FHA domain-containing protein compare
ABZR86_RS01150 -5.0 -1.1 hypothetical protein compare
ABZR86_RS12280 -4.9 -1.8 dihydrolipoyl dehydrogenase compare
ABZR86_RS16770 -4.9 -1.1 phage holin family protein compare
ABZR86_RS07305 -4.8 -1.1 tRNA-Asp compare
ABZR86_RS19865 -4.8 -3.3 phosphoribosylformylglycinamidine cyclo-ligase compare
ABZR86_RS11735 -4.7 -1.0 large-conductance mechanosensitive channel protein MscL compare
ABZR86_RS14100 -4.7 -7.0 DNA adenine methylase compare
ABZR86_RS04495 -4.7 -1.0 hypothetical protein compare
ABZR86_RS11975 -4.7 -1.0 UPF0149 family protein compare
ABZR86_RS03315 -4.4 -1.3 phage tail protein compare
ABZR86_RS13865 -4.4 -1.0 DNA topoisomerase I compare
ABZR86_RS07235 -4.3 -0.9 tRNA-Asp compare
ABZR86_RS12885 -4.0 -2.8 magnesium-translocating P-type ATPase compare
ABZR86_RS21075 -3.8 -1.2 SDR family oxidoreductase compare
ABZR86_RS07900 -3.8 -2.0 transcriptional repressor compare
ABZR86_RS08170 -3.6 -1.3 methionine--tRNA ligase compare
ABZR86_RS15640 -3.5 -1.7 orotate phosphoribosyltransferase compare
ABZR86_RS15945 -3.5 -2.6 dihydroxy-acid dehydratase compare
ABZR86_RS18450 -3.5 -2.4 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha compare
ABZR86_RS13915 -3.5 -8.4 glycosyltransferase family 2 protein compare
ABZR86_RS12065 -3.4 -3.3 indole-3-glycerol phosphate synthase TrpC compare
ABZR86_RS18715 -3.4 -7.3 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
ABZR86_RS08135 -3.3 -1.0 hypothetical protein compare
ABZR86_RS12960 -3.3 -1.7 hypothetical protein compare
ABZR86_RS21435 -2.9 -3.2 DegT/DnrJ/EryC1/StrS family aminotransferase compare
ABZR86_RS10220 -2.9 -1.2 type II secretion system protein N compare
ABZR86_RS11885 -2.9 -1.9 ATP-binding cassette domain-containing protein compare
ABZR86_RS17180 -2.9 -6.2 glycosyltransferase compare
ABZR86_RS15980 -2.8 -2.8 homoserine kinase (EC 2.7.1.39) (from data) compare
ABZR86_RS13500 -2.7 -3.3 accessory factor UbiK family protein compare
ABZR86_RS06190 -2.6 -1.9 YceD family protein compare
ABZR86_RS08700 -2.6 -2.4 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
ABZR86_RS09885 -2.6 -1.5 trypsin-like peptidase domain-containing protein compare
ABZR86_RS13900 -2.5 -2.2 glycosyltransferase compare
ABZR86_RS12070 -2.5 -2.8 anthranilate phosphoribosyltransferase compare
ABZR86_RS14700 -2.5 -2.7 glucose-6-phosphate dehydrogenase compare
ABZR86_RS10790 -2.5 -1.7 7-carboxy-7-deazaguanine synthase QueE compare
ABZR86_RS14690 -2.4 -2.7 phosphogluconate dehydratase compare
ABZR86_RS14285 -2.4 -1.9 antibiotic biosynthesis monooxygenase compare
ABZR86_RS11450 -2.3 -1.6 DUF4189 domain-containing protein compare
ABZR86_RS19225 -2.3 -2.0 site-specific tyrosine recombinase XerD compare
ABZR86_RS06580 -2.2 -1.5 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR86_RS12935 -2.2 -1.7 DUF2244 domain-containing protein compare
ABZR86_RS09845 -2.2 -5.4 DUF1631 domain-containing protein compare
ABZR86_RS14535 -2.2 -1.6 hypothetical protein compare
ABZR86_RS11655 -2.1 -3.5 SLC13 family permease compare
ABZR86_RS03500 -2.1 -6.8 TonB-dependent siderophore receptor compare
ABZR86_RS04980 -2.1 -1.3 SPOR domain-containing protein compare
ABZR86_RS12780 -2.1 -2.9 pteridine reductase compare
ABZR86_RS20290 -2.0 -2.1 flagellar motor protein MotD compare
ABZR86_RS05550 -2.0 -2.3 lipopolysaccharide assembly protein LapB compare
ABZR86_RS02220 -2.0 -6.0 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR86_RS11185 -2.0 -1.8 response regulator transcription factor compare
ABZR86_RS18140 -2.0 -1.0 hypothetical protein compare
ABZR86_RS20295 -2.0 -1.8 chemotaxis protein CheW compare
ABZR86_RS08000 -1.9 -5.4 tryptophan synthase subunit beta compare
ABZR86_RS08730 -1.9 -4.1 N-acetylornithine carbamoyltransferase compare
ABZR86_RS13880 -1.9 -1.5 peptide deformylase compare
ABZR86_RS02195 -1.9 -2.4 ATP-dependent Clp protease adapter ClpS compare
ABZR86_RS08705 -1.9 -4.4 N-acetylglutamate synthase; N-acetylglutamate kinase (EC 2.3.1.1; EC 2.7.2.8) (from data) compare
ABZR86_RS10710 -1.9 -1.0 transcriptional regulator NrdR compare
ABZR86_RS18620 -1.9 -0.8 OsmC family protein compare
ABZR86_RS20150 -1.8 -1.3 PilZ domain-containing protein compare
ABZR86_RS05700 -1.8 -1.7 SsrA-binding protein SmpB compare
ABZR86_RS21480 -1.8 -3.0 arginase family protein compare
ABZR86_RS02680 -1.8 -1.6 hypothetical protein compare
ABZR86_RS18655 -1.8 -4.1 transketolase compare
ABZR86_RS06040 -1.7 -1.9 hypothetical protein compare
ABZR86_RS16585 -1.7 -1.7 TMEM175 family protein compare
ABZR86_RS19715 -1.7 -3.4 Dps family protein compare
ABZR86_RS15950 -1.7 -3.0 3-isopropylmalate dehydrogenase compare
ABZR86_RS12410 -1.7 -2.1 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
ABZR86_RS09330 -1.7 -1.6 HutD family protein compare
ABZR86_RS08340 -1.7 -1.5 adenylosuccinate synthase compare
ABZR86_RS10360 -1.7 -1.2 response regulator compare
ABZR86_RS08040 -1.7 -2.8 chorismate synthase compare
ABZR86_RS07180 -1.7 -3.0 RNA polymerase sigma factor RpoE compare
ABZR86_RS18430 -1.6 -0.9 type II toxin-antitoxin system HigA family antitoxin compare
ABZR86_RS08480 -1.6 -2.3 methylisocitrate lyase compare
ABZR86_RS02795 -1.6 -0.9 phosphoglycerate mutase compare
ABZR86_RS10830 -1.6 -1.1 Holliday junction branch migration DNA helicase RuvB compare
ABZR86_RS15935 -1.6 -4.6 biosynthetic-type acetolactate synthase large subunit compare
ABZR86_RS15975 -1.6 -4.0 threonine synthase (EC 4.2.3.1) (from data) compare
ABZR86_RS06785 -1.6 -1.7 SPOR domain-containing protein compare
ABZR86_RS20435 -1.6 -1.0 hypothetical protein compare
ABZR86_RS06275 -1.6 -1.5 DUF6165 family protein compare
ABZR86_RS13495 -1.6 -1.2 YifB family Mg chelatase-like AAA ATPase compare
ABZR86_RS15085 -1.5 -0.9 hypothetical protein compare
ABZR86_RS08265 -1.5 -1.5 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB compare
ABZR86_RS19630 -1.5 -1.0 hypothetical protein compare
ABZR86_RS07560 -1.5 -3.6 NAD-glutamate dehydrogenase domain-containing protein compare
ABZR86_RS11570 -1.5 -3.9 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR86_RS05010 -1.5 -1.0 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
ABZR86_RS19870 -1.5 -2.2 DUF2066 domain-containing protein compare
ABZR86_RS06260 -1.5 -1.5 MBL fold metallo-hydrolase compare
ABZR86_RS05500 -1.5 -1.2 trimeric intracellular cation channel family protein compare
ABZR86_RS13380 -1.5 -0.8 Sec-independent protein translocase subunit TatA compare
ABZR86_RS08435 -1.5 -2.1 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare
ABZR86_RS20215 -1.5 -1.0 flagellar motor switch protein FliM compare
ABZR86_RS11485 -1.5 -1.7 hypothetical protein compare
ABZR86_RS02400 -1.4 -0.6 hypothetical protein compare
ABZR86_RS13905 -1.4 -3.7 glycosyltransferase family 1 protein compare
ABZR86_RS19910 -1.4 -1.1 inorganic phosphate transporter compare
ABZR86_RS15900 -1.4 -1.6 hypothetical protein compare
ABZR86_RS22100 -1.4 -1.7 asparaginase domain-containing protein compare
ABZR86_RS10715 -1.4 -5.0 serine hydroxymethyltransferase compare
ABZR86_RS18855 -1.4 -2.0 ATP-binding cassette domain-containing protein compare
ABZR86_RS04375 -1.4 -0.8 GNAT family N-acetyltransferase compare
ABZR86_RS06125 -1.4 -1.3 PIG-L family deacetylase compare
ABZR86_RS18180 -1.4 -2.4 RIO1 family regulatory kinase/ATPase compare
ABZR86_RS12415 -1.4 -1.3 NADP-dependent malic enzyme compare
ABZR86_RS14930 -1.3 -3.9 exodeoxyribonuclease III compare
ABZR86_RS20675 -1.3 -0.8 1-phosphofructokinase family hexose kinase compare
ABZR86_RS05210 -1.3 -2.0 hypothetical protein compare
ABZR86_RS14165 -1.3 -1.1 hypothetical protein compare
ABZR86_RS22230 -1.3 -1.3 chemotaxis protein CheA compare
ABZR86_RS15315 -1.3 -4.5 phenylalanine 4-monooxygenase compare
ABZR86_RS02045 -1.3 -2.4 hypothetical protein compare
ABZR86_RS06730 -1.3 -2.3 histidinol dehydrogenase compare
ABZR86_RS06700 -1.2 -1.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABZR86_RS16280 -1.2 -1.6 amidohydrolase compare
ABZR86_RS09575 -1.2 -1.1 tRNA-Ala compare
ABZR86_RS10205 -1.2 -1.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
ABZR86_RS11470 -1.2 -1.9 hypothetical protein compare
ABZR86_RS03975 -1.2 -0.9 class I SAM-dependent methyltransferase compare
ABZR86_RS02135 -1.2 -1.6 pseudouridine synthase compare
ABZR86_RS06725 -1.2 -1.6 histidinol-phosphate transaminase compare
ABZR86_RS21130 -1.2 -1.4 PadR family transcriptional regulator compare
ABZR86_RS10475 -1.2 -2.8 shikimate kinase compare
ABZR86_RS08130 -1.2 -3.0 dCTP deaminase compare
ABZR86_RS08010 -1.2 -1.6 phosphoribosylanthranilate isomerase compare
ABZR86_RS08710 -1.2 -2.8 N-acetylcitrulline deacetylase (EC 3.5.1.-) (from data) compare
ABZR86_RS16645 -1.2 -1.6 hypothetical protein compare
ABZR86_RS02305 -1.2 -1.1 hypothetical protein compare
ABZR86_RS09295 -1.2 -1.0 nucleoside-diphosphate sugar epimerase compare
ABZR86_RS11720 -1.1 -0.7 ABC transporter ATP-binding protein compare
ABZR86_RS07930 -1.1 -1.4 phosphatase PAP2 family protein compare
ABZR86_RS20915 -1.1 -3.0 DNA-3-methyladenine glycosylase compare
ABZR86_RS04825 -1.1 -1.0 NmrA family NAD(P)-binding protein compare
ABZR86_RS15970 -1.1 -2.4 2-isopropylmalate synthase compare
ABZR86_RS06660 -1.1 -1.5 NUDIX hydrolase compare
ABZR86_RS06720 -1.1 -1.3 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABZR86_RS08915 -1.1 -0.5 hypothetical protein compare
ABZR86_RS05000 -1.1 -1.1 type II secretion system protein GspK compare
ABZR86_RS18585 -1.1 -2.2 polysaccharide biosynthesis/export family protein compare
ABZR86_RS09035 -1.1 -1.1 TerC family protein compare
ABZR86_RS11820 -1.1 -1.3 hypothetical protein compare
ABZR86_RS10480 -1.1 -0.9 3-dehydroquinate synthase compare
ABZR86_RS10035 -1.1 -2.1 glycosyltransferase family 2 protein compare
ABZR86_RS07885 -1.1 -1.5 cation diffusion facilitator family transporter compare
ABZR86_RS04805 -1.1 -0.8 hypothetical protein compare
ABZR86_RS13055 -1.1 -2.9 glucokinase compare
ABZR86_RS21020 -1.1 -2.1 ATP-binding protein compare
ABZR86_RS05905 -1.1 -1.7 assimilatory sulfite reductase (NADPH) flavoprotein subunit compare
ABZR86_RS16630 -1.1 -1.4 energy transducer TonB compare
ABZR86_RS02230 -1.1 -1.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR86_RS22000 -1.1 -0.8 acyl-CoA thioesterase compare
ABZR86_RS18360 -1.1 -3.2 response regulator transcription factor compare
ABZR86_RS10215 -1.1 -2.1 inositol monophosphatase family protein compare
ABZR86_RS20010 -1.1 -3.6 gamma-glutamyltransferase compare
ABZR86_RS13910 -1.1 -4.8 glycosyltransferase compare
ABZR86_RS12835 -1.1 -2.3 DedA family protein compare
ABZR86_RS11200 -1.1 -1.7 hypothetical protein compare
ABZR86_RS16300 -1.0 -1.1 YlcI/YnfO family protein compare
ABZR86_RS17225 -1.0 -0.7 TetR/AcrR family transcriptional regulator compare
ABZR86_RS05230 -1.0 -1.2 TetR family transcriptional regulator compare
ABZR86_RS08715 -1.0 -3.1 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
ABZR86_RS02985 -1.0 -1.0 alpha/beta fold hydrolase compare
ABZR86_RS09485 -1.0 -0.5 SUF system Fe-S cluster assembly regulator compare
ABZR86_RS06630 -1.0 -1.0 phosphopyruvate hydratase compare
ABZR86_RS07665 -1.0 -1.0 exodeoxyribonuclease V subunit beta compare
ABZR86_RS01785 -1.0 -1.7 cysteine hydrolase family protein compare
ABZR86_RS17860 -1.0 -1.3 hypothetical protein compare
ABZR86_RS19580 -1.0 -0.9 N-acetylmuramoyl-L-alanine amidase compare
ABZR86_RS06590 -1.0 -0.7 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABZR86_RS17155 -1.0 -1.4 mitochondrial fission ELM1 family protein compare
ABZR86_RS03600 -1.0 -1.5 TMEM175 family protein compare
ABZR86_RS02805 -1.0 -0.5 STAS/SEC14 domain-containing protein compare
ABZR86_RS06380 -1.0 -2.1 MarR family transcriptional regulator compare
ABZR86_RS19015 -1.0 -1.4 DUF1304 domain-containing protein compare
ABZR86_RS20560 -1.0 -1.0 hypothetical protein compare
ABZR86_RS04800 -1.0 -1.8 carbonic anhydrase compare
ABZR86_RS05050 -1.0 -0.6 energy transducer TonB compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source L-Asparagine in Dyella japonica UNC79MFTsu3.2

For nitrogen source L-Asparagine across organisms