Experiment set3IT081 for Azospirillum brasilense Sp245

Compare to:

Ammonium chloride nitrogen source

200 most important genes:

  gene name fitness t score description  
AZOBR_RS09435 -8.0 -5.5 3'-5'-bisphosphate nucleotidase compare
AZOBR_RS19500 -7.2 -5.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AZOBR_RS01665 -6.9 -9.4 imidazoleglycerol-phosphate dehydratase compare
AZOBR_RS20485 -6.8 -9.3 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) compare
AZOBR_RS03855 -6.4 -9.8 prephenate dehydratase compare
AZOBR_RS10140 -6.2 -3.2 siroheme synthase compare
AZOBR_RS01690 -6.0 -8.2 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AZOBR_RS10125 -5.7 -14.2 sulfite reductase compare
AZOBR_RS03545 -5.7 -6.5 isopropylmalate isomerase compare
AZOBR_RS00520 -5.6 -5.5 tryptophan synthase subunit alpha compare
AZOBR_RS02140 -5.6 -13.0 O-succinylhomoserine sulfhydrylase compare
AZOBR_RS12155 -5.6 -8.8 2-isopropylmalate synthase compare
AZOBR_RS31135 -5.6 -5.4 pyruvate phosphate dikinase compare
AZOBR_RS07450 -5.2 -3.6 indole-3-glycerol-phosphate synthase compare
AZOBR_RS01670 -5.0 -6.0 imidazole glycerol phosphate synthase compare
AZOBR_RS16290 -5.0 -3.3 phosphoribosylaminoimidazole synthetase compare
AZOBR_RS00325 -4.8 -6.5 glycerol-3-phosphate dehydrogenase compare
AZOBR_RS01680 -4.7 -6.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AZOBR_RS03845 -4.6 -8.2 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) (from data) compare
AZOBR_RS04335 -4.6 -4.5 phosphoribosylformylglycinamidine synthase compare
AZOBR_RS09540 -4.6 -3.0 5 10-methylenetetrahydrofolate reductase compare
AZOBR_RS14135 -4.5 -2.9 isopropylmalate isomerase compare
AZOBR_RS01685 -4.4 -6.5 imidazole glycerol phosphate synthase compare
AZOBR_RS10150 -4.4 -9.3 sulfate adenylyltransferase compare
AZOBR_RS00525 -4.4 -4.1 tryptophan synthase subunit beta compare
AZOBR_RS02815 -4.3 -5.9 hypothetical protein compare
AZOBR_RS09535 -4.0 -8.1 ArsR family transcriptional regulator compare
AZOBR_RS25120 -4.0 -19.4 4Fe-4S ferredoxin compare
AZOBR_RS16295 -3.8 -1.5 phosphoribosylglycinamide formyltransferase compare
AZOBR_RS04460 -3.8 -2.6 dihydroorotase compare
AZOBR_RS10155 -3.8 -10.3 NodQ bifunctional enzyme compare
AZOBR_RS33465 -3.7 -2.6 GDP-mannose 4 6-dehydratase compare
AZOBR_RS10685 -3.5 -3.2 ATP phosphoribosyltransferase compare
AZOBR_RS26655 -3.2 -1.7 ATPase compare
AZOBR_RS14130 -3.2 -6.0 3-isopropylmalate dehydrogenase compare
AZOBR_RS06435 -3.1 -4.2 NAD synthetase compare
AZOBR_RS08310 -2.9 -3.3 amidophosphoribosyltransferase compare
AZOBR_RS05080 -2.9 -2.1 orotate phosphoribosyltransferase compare
AZOBR_RS01135 -2.9 -2.8 alkaline phosphatase compare
AZOBR_RS06515 -2.8 -2.1 sodium:proton antiporter compare
AZOBR_RS29080 -2.8 -1.5 hypothetical protein compare
AZOBR_RS33395 -2.7 -7.3 NAD-dependent dehydratase compare
AZOBR_RS07940 -2.7 -8.0 phosphomethylpyrimidine synthase compare
AZOBR_RS04370 -2.7 -4.8 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
AZOBR_RS06425 -2.7 -11.9 NAD(P) transhydrogenase subunit alpha compare
AZOBR_RS07620 -2.6 -4.0 esterase compare
AZOBR_RS15395 -2.6 -2.7 phytoene synthase compare
AZOBR_RS10130 -2.5 -1.6 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
AZOBR_RS08650 -2.5 -4.6 cystathionine beta-lyase compare
AZOBR_RS33830 -2.4 -8.3 mannose-1-phosphate guanylyltransferase compare
AZOBR_RS25125 -2.4 -8.2 L-lactate permease compare
AZOBR_RS15495 -2.3 -3.0 ABC transporter ATPase compare
AZOBR_RS13520 -2.3 -3.0 dihydroorotate dehydrogenase compare
AZOBR_RS19515 -2.3 -7.2 ArsC family transcriptional regulator compare
AZOBR_RS03190 -2.2 -3.1 aerobic cobaltochelatase subunit CobS compare
AZOBR_RS30275 -2.2 -1.6 hypothetical protein compare
AZOBR_RS01805 -2.2 -2.0 tRNA modification GTPase TrmE compare
AZOBR_RS03135 -2.2 -1.6 orotidine 5'-phosphate decarboxylase compare
AZOBR_RS03155 -2.1 -6.1 iron ABC transporter permease compare
AZOBR_RS16235 -2.1 -5.8 polyphosphate kinase compare
AZOBR_RS20575 -2.1 -3.3 aspartate carbamoyltransferase compare
AZOBR_RS03165 -2.1 -11.0 iron deficiency-induced protein A compare
AZOBR_RS05340 -2.0 -1.3 septum site-determining protein MinC compare
AZOBR_RS10315 -1.9 -2.9 fumarate hydratase compare
AZOBR_RS05770 -1.8 -4.5 2-hydroxyacid dehydrogenase compare
AZOBR_RS19545 -1.8 -2.2 hypothetical protein compare
AZOBR_RS11025 -1.8 -5.2 isocitrate dehydrogenase compare
AZOBR_RS01740 -1.7 -1.6 AbrB family transcriptional regulator compare
AZOBR_RS01775 -1.7 -3.5 DNA polymerase III subunit epsilon compare
AZOBR_RS22090 -1.5 -1.1 hypothetical protein compare
AZOBR_RS09090 -1.5 -3.0 nucleotide sugar dehydratase compare
AZOBR_RS00860 -1.5 -1.6 elongation factor 4 compare
AZOBR_RS06560 -1.5 -2.9 acetolactate synthase compare
AZOBR_RS07920 -1.5 -1.4 NAD synthetase compare
AZOBR_RS03240 -1.5 -0.7 recombinase XerD compare
AZOBR_RS07455 -1.4 -0.8 anthranilate phosphoribosyltransferase compare
AZOBR_RS01850 -1.4 -1.2 hypothetical protein compare
AZOBR_RS17140 -1.4 -2.0 putative low-affinity phosphate transport accessory protein compare
AZOBR_RS02300 -1.3 -1.5 cell division protein FtsK compare
AZOBR_RS00025 -1.3 -2.6 TPP compare
AZOBR_RS09455 -1.3 -3.6 glycogen branching protein compare
AZOBR_RS11095 -1.3 -2.2 recombinase RecA compare
AZOBR_RS01180 -1.3 -1.7 peptidase S41 compare
AZOBR_RS19060 -1.3 -2.4 hypothetical protein compare
AZOBR_RS13695 -1.3 -3.5 hypothetical protein compare
AZOBR_RS13700 -1.3 -1.7 hypothetical protein compare
AZOBR_RS28965 -1.3 -1.0 hypothetical protein compare
AZOBR_RS17190 -1.3 -2.8 hypothetical protein compare
AZOBR_RS15535 -1.2 -1.1 heme biosynthesis protein HemY compare
AZOBR_RS14430 -1.2 -1.9 chemotaxis protein CheY compare
AZOBR_RS25450 -1.2 -1.7 hypothetical protein compare
AZOBR_RS03075 -1.2 -1.3 tRNA-Ala compare
AZOBR_RS09185 -1.2 -2.7 hypothetical protein compare
AZOBR_RS12865 -1.2 -2.6 hypothetical protein compare
AZOBR_RS07145 -1.1 -2.4 peptidase compare
AZOBR_RS13655 -1.1 -4.0 hypothetical protein compare
AZOBR_RS20045 -1.1 -1.3 flavin reductase compare
AZOBR_RS26280 -1.1 -0.9 hypothetical protein compare
AZOBR_RS02200 -1.1 -2.9 nucleoside-triphosphate diphosphatase compare
AZOBR_RS06940 -1.1 -2.4 glycine cleavage system protein T compare
AZOBR_RS13845 -1.1 -1.0 hypothetical protein compare
AZOBR_RS01755 -1.1 -2.6 hypothetical protein compare
AZOBR_RS09195 -1.1 -2.6 histidine kinase compare
AZOBR_RS17145 -1.1 -2.4 inorganic phosphate transporter compare
AZOBR_RS02245 -1.1 -2.6 molecular chaperone DnaJ compare
AZOBR_RS19535 -1.1 -1.6 septum formation protein Maf compare
AZOBR_RS04700 -1.0 -1.0 3-hydroxylacyl-(acyl carrier protein) dehydratase compare
AZOBR_RS09035 -1.0 -1.2 transcriptional regulator compare
AZOBR_RS30605 -1.0 -3.6 poly-beta-hydroxybutyrate polymerase compare
AZOBR_RS33470 -1.0 -1.4 sugar ABC transporter permease compare
AZOBR_RS32245 -1.0 -0.9 tRNA-Phe compare
AZOBR_RS30685 -1.0 -4.2 DNA polymerase compare
AZOBR_RS33820 -1.0 -3.8 hypothetical protein compare
AZOBR_RS19110 -1.0 -0.9 PadR family transcripitonal regulator compare
AZOBR_RS24635 -0.9 -1.4 hypothetical protein compare
AZOBR_RS33565 -0.9 -3.0 UDP-N-acetyl-D-galactosamine dehydrogenase compare
AZOBR_RS02175 -0.9 -1.2 hypothetical protein compare
AZOBR_RS09225 -0.9 -2.3 membrane protein compare
AZOBR_RS23090 -0.9 -1.1 Crp/Fnr family transcription regulator compare
AZOBR_RS31485 -0.9 -2.1 hypothetical protein compare
AZOBR_RS13640 -0.9 -3.9 putative phage Major head protein compare
AZOBR_RS17360 -0.9 -5.0 electron transfer flavoprotein compare
AZOBR_RS09030 -0.9 -1.0 metallophosphoesterase compare
AZOBR_RS02780 -0.9 -1.3 hypothetical protein compare
AZOBR_RS11640 -0.9 -1.1 MarR family transcriptional regulator compare
AZOBR_RS14345 -0.9 -1.9 DEAD/DEAH box helicase compare
AZOBR_RS27550 -0.9 -1.0 transcriptional regulator compare
AZOBR_RS25870 -0.9 -1.3 glycerol-3-phosphate dehydrogenase compare
AZOBR_RS03705 -0.9 -2.5 glutathione S-transferase compare
AZOBR_RS17575 -0.9 -0.9 tRNA-Asn compare
AZOBR_RS24285 -0.9 -1.3 hypothetical protein compare
AZOBR_RS26005 -0.9 -1.8 chemotaxis protein X compare
AZOBR_RS04970 -0.9 -1.2 hypothetical protein compare
AZOBR_RS33845 -0.9 -4.7 heptosyltransferase compare
AZOBR_RS15985 -0.9 -2.7 hypothetical protein compare
AZOBR_RS33315 -0.9 -2.2 hypothetical protein compare
AZOBR_RS04635 -0.9 -2.1 oxidoreductase compare
AZOBR_RS28700 -0.8 -1.9 hypothetical protein compare
AZOBR_RS21655 -0.8 -1.2 N-acetylmuramoyl-L-alanine amidase compare
AZOBR_RS11865 -0.8 -3.2 membrane protein compare
AZOBR_RS13585 -0.8 -4.8 hypothetical protein compare
AZOBR_RS28715 -0.8 -3.5 hypothetical protein compare
AZOBR_RS13765 -0.8 -2.2 hypothetical protein compare
AZOBR_RS03110 -0.8 -1.2 integration host factor subunit beta compare
AZOBR_RS32605 -0.8 -2.3 membrane protein compare
AZOBR_RS01195 -0.8 -1.7 RNA methyltransferase compare
AZOBR_RS16220 -0.8 -1.4 ribonuclease D compare
AZOBR_RS15015 -0.8 -0.9 dihydroxy-acid dehydratase compare
AZOBR_RS30180 -0.8 -1.5 hemolysin D compare
AZOBR_RS20750 -0.8 -1.4 cytochrome B compare
AZOBR_RS01800 -0.8 -2.3 ferredoxin compare
AZOBR_RS06420 -0.8 -1.1 hypothetical protein compare
AZOBR_RS27430 -0.8 -1.6 putative ABC transporter substrate-binding periplasmic protein compare
AZOBR_RS26630 -0.8 -1.4 ABC transporter permease compare
AZOBR_RS33445 -0.8 -4.8 peptidase C39 compare
AZOBR_RS11105 -0.8 -0.7 histidine kinase compare
AZOBR_RS09760 -0.7 -1.1 ferredoxin compare
AZOBR_RS13705 -0.7 -3.1 hypothetical protein compare
AZOBR_RS15760 -0.7 -1.3 ATP-binding protein compare
AZOBR_RS30505 -0.7 -2.0 transcriptional regulator compare
AZOBR_RS02220 -0.7 -1.4 chemotaxis protein CheY compare
AZOBR_RS14375 -0.7 -0.8 suhB compare
AZOBR_RS23165 -0.7 -1.0 cytochrome C oxidase subunit III compare
AZOBR_RS10580 -0.7 -3.3 protoheme IX farnesyltransferase compare
AZOBR_RS13580 -0.7 -3.4 hypothetical protein compare
AZOBR_RS23175 -0.7 -4.8 cytochrome O ubiquinol oxidase compare
AZOBR_RS31055 -0.7 -0.9 hypothetical protein compare
AZOBR_RS07810 -0.7 -5.7 poly(3-hydroxyalkanoate) synthetase compare
AZOBR_RS15860 -0.7 -1.4 ABC transporter substrate-binding protein compare
AZOBR_RS33535 -0.7 -5.8 glycosyl transferase family 1 compare
AZOBR_RS07950 -0.7 -2.1 hydroxypyruvate reductase compare
AZOBR_RS09910 -0.7 -1.0 hypothetical protein compare
AZOBR_RS19810 -0.7 -0.9 membrane protein compare
AZOBR_RS15890 -0.7 -1.2 DNA topoisomerase I compare
AZOBR_RS00145 -0.7 -2.2 thioredoxin compare
AZOBR_RS22790 -0.7 -2.0 peptidase compare
AZOBR_RS25050 -0.7 -1.7 hypothetical protein compare
AZOBR_RS06370 -0.7 -0.9 hypothetical protein compare
AZOBR_RS14335 -0.7 -0.9 hypothetical protein compare
AZOBR_RS33895 -0.7 -3.0 hypothetical protein compare
AZOBR_RS20710 -0.7 -1.8 ATPase AAA compare
AZOBR_RS33440 -0.7 -4.0 secretion protein compare
AZOBR_RS04265 -0.7 -3.5 2-isopropylmalate synthase compare
AZOBR_RS02370 -0.7 -2.3 hypothetical protein compare
AZOBR_RS24965 -0.7 -2.8 hypothetical protein compare
AZOBR_RS23150 -0.7 -3.0 chemotaxis protein CheY compare
AZOBR_RS08325 -0.7 -1.5 methionine aminopeptidase compare
AZOBR_RS28970 -0.7 -1.6 hypothetical protein compare
AZOBR_RS00105 -0.6 -2.3 ornithine decarboxylase compare
AZOBR_RS22035 -0.6 -2.0 hypothetical protein compare
AZOBR_RS21665 -0.6 -1.6 hypothetical protein compare
AZOBR_RS32670 -0.6 -1.3 hypothetical protein compare
AZOBR_RS01015 -0.6 -2.8 haloacid dehalogenase compare
AZOBR_RS10355 -0.6 -1.5 membrane protein compare
AZOBR_RS32170 -0.6 -1.9 hypothetical protein compare
AZOBR_RS00450 -0.6 -1.6 GCN5 family acetyltransferase compare
AZOBR_RS01645 -0.6 -0.9 ABC transporter compare
AZOBR_RS05830 -0.6 -1.5 Rrf2 family transcriptional regulator compare
AZOBR_RS33825 -0.6 -1.9 hypothetical protein compare
AZOBR_RS25075 -0.6 -0.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum brasilense Sp245 in nitrogen source experiments

For nitrogen source Ammonium chloride across organisms