Experiment set3IT080 for Methanococcus maripaludis JJ

Compare to:

H2 N-free with 10mM Ammonium chloride

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS08065 +1.2 1.1 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS04415 +1.1 2.7 hypothetical protein compare
MMJJ_RS09405 +1.0 3.1 hypothetical protein compare
MMJJ_RS03360 +0.9 1.6 hypothetical protein compare
MMJJ_RS00525 +0.9 1.9 Dabb family protein compare
MMJJ_RS07825 +0.8 3.8 YciI family protein compare
MMJJ_RS09295 +0.8 0.8 hypothetical protein compare
MMJJ_RS05135 +0.8 1.0 50S ribosomal protein L18Ae compare
MMJJ_RS09050 +0.7 2.6 hypothetical protein compare
MMJJ_RS06385 +0.7 2.5 hypothetical protein compare
MMJJ_RS09365 +0.7 1.3 hypothetical protein compare
MMJJ_RS06275 +0.7 2.8 hypothetical protein compare
MMJJ_RS01010 +0.6 6.1 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS07035 +0.6 0.8 glycosyl transferase compare
MMJJ_RS08025 +0.6 2.8 hypothetical protein compare
MMJJ_RS09380 +0.6 1.8 hypothetical protein compare
MMJJ_RS06680 +0.6 2.8 DUF366 family protein compare
MMJJ_RS06495 +0.6 1.2 hypothetical protein compare
MMJJ_RS02270 +0.6 2.4 HEPN domain-containing protein compare
MMJJ_RS01650 +0.6 4.7 acetolactate synthase large subunit compare
MMJJ_RS06765 +0.6 4.3 hypothetical protein compare
MMJJ_RS07790 +0.6 3.9 hypothetical protein compare
MMJJ_RS06445 +0.6 4.3 hypothetical protein compare
MMJJ_RS07915 +0.6 2.3 CBS domain-containing protein compare
MMJJ_RS07505 +0.5 0.5 DNA-directed RNA polymerase subunit K compare
MMJJ_RS04525 +0.5 1.5 hypothetical protein compare
MMJJ_RS02885 +0.5 2.9 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS06580 +0.5 3.2 alanine dehydrogenase compare
MMJJ_RS07040 +0.5 0.5 preprotein translocase subunit SecY compare
MMJJ_RS04340 +0.5 1.1 hypothetical protein compare
MMJJ_RS07235 +0.5 3.7 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS04105 +0.5 3.7 prepilin peptidase compare
MMJJ_RS09325 +0.5 2.7 hypothetical protein compare
MMJJ_RS03805 +0.5 1.5 hypothetical protein compare
MMJJ_RS06105 +0.5 2.8 DUF99 family protein compare
MMJJ_RS06235 +0.5 3.5 IGHMBP2 family helicase compare
MMJJ_RS06550 +0.5 3.3 ABC transporter permease compare
MMJJ_RS07805 +0.5 2.1 ferredoxin family protein compare
MMJJ_RS06555 +0.5 3.4 ATP-binding cassette domain-containing protein compare
MMJJ_RS07270 +0.5 2.3 ribonuclease HII compare
MMJJ_RS05350 +0.4 2.2 DUF192 domain-containing protein compare
MMJJ_RS06770 +0.4 3.2 hypothetical protein compare
MMJJ_RS05700 +0.4 2.7 metallophosphoesterase compare
MMJJ_RS07905 +0.4 2.2 DUF89 domain-containing protein compare
MMJJ_RS03700 +0.4 2.1 hypothetical protein compare
MMJJ_RS08820 +0.4 1.5 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS02915 +0.4 2.0 hypothetical protein compare
MMJJ_RS02365 +0.4 1.4 DUF2540 domain-containing protein compare
MMJJ_RS05870 +0.4 1.4 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS03135 +0.4 1.5 CBS domain-containing protein compare
MMJJ_RS07920 +0.4 2.4 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS06710 +0.4 2.9 TldD/PmbA family protein compare
MMJJ_RS06430 +0.4 2.3 haloacid dehalogenase compare
MMJJ_RS04055 +0.4 1.3 hypothetical protein compare
MMJJ_RS06465 +0.4 1.8 hypothetical protein compare
MMJJ_RS05510 +0.4 2.4 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS05300 +0.4 3.2 potassium channel protein compare
MMJJ_RS06100 +0.4 2.0 rubrerythrin compare
MMJJ_RS06205 +0.4 2.5 EamA family transporter compare
MMJJ_RS00785 +0.4 0.7 hypothetical protein compare
MMJJ_RS06115 +0.4 2.4 pyruvate kinase compare
MMJJ_RS00170 +0.4 1.6 thioredoxin family protein compare
MMJJ_RS06505 +0.4 0.9 prephenate dehydratase compare
MMJJ_RS06960 +0.4 3.1 CAP domain-containing protein compare
MMJJ_RS08935 +0.4 0.5 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS08485 +0.4 2.0 Lrp/AsnC family transcriptional regulator compare
MMJJ_RS07420 +0.4 1.9 protease complex subunit PrcB family protein compare
MMJJ_RS01990 +0.4 1.4 universal stress protein compare
MMJJ_RS06450 +0.4 2.4 DUF3343 domain-containing protein compare
MMJJ_RS06295 +0.4 2.2 DUF2096 family protein compare
MMJJ_RS02240 +0.4 1.9 CGGC domain-containing protein compare
MMJJ_RS08165 +0.4 2.0 thermonuclease family protein compare
MMJJ_RS03425 +0.4 1.7 DUF2080 family transposase-associated protein compare
MMJJ_RS08570 +0.4 2.1 multidrug resistance efflux transporter family protein compare
MMJJ_RS06585 +0.4 2.1 alanine racemase compare
MMJJ_RS06720 +0.4 2.2 mechanosensitive ion channel family protein compare
MMJJ_RS07780 +0.4 1.6 DUF190 domain-containing protein compare
MMJJ_RS06590 +0.4 2.4 sodium:alanine symporter family protein compare
MMJJ_RS08045 +0.4 2.7 transporter substrate-binding domain-containing protein compare
MMJJ_RS06130 +0.4 1.7 hypothetical protein compare
MMJJ_RS05400 +0.4 1.6 CoA-binding protein compare
MMJJ_RS07225 +0.4 1.9 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS01665 +0.3 1.9 archease compare
MMJJ_RS05605 +0.3 1.9 hypothetical protein compare
MMJJ_RS01675 +0.3 2.8 malate dehydrogenase compare
MMJJ_RS01635 +0.3 2.9 DUF4041 domain-containing protein compare
MMJJ_RS07220 +0.3 2.5 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS06440 +0.3 1.7 DUF4870 domain-containing protein compare
MMJJ_RS04870 +0.3 0.5 tRNA-Asp compare
MMJJ_RS06520 +0.3 2.1 TldD/PmbA family protein compare
MMJJ_RS06475 +0.3 2.0 AAA family ATPase compare
MMJJ_RS00700 +0.3 1.7 P-II family nitrogen regulator compare
MMJJ_RS08295 +0.3 2.6 iron ABC transporter substrate-binding protein compare
MMJJ_RS03205 +0.3 1.9 metallophosphoesterase compare
MMJJ_RS05730 +0.3 1.7 TIM barrel protein compare
MMJJ_RS08450 +0.3 2.0 undecaprenyl-diphosphate phosphatase compare
MMJJ_RS09010 +0.3 1.4 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS07480 +0.3 2.5 FAD-dependent oxidoreductase compare
MMJJ_RS05100 +0.3 1.7 P-II family nitrogen regulator compare
MMJJ_RS09390 +0.3 0.6 hypothetical protein compare
MMJJ_RS04560 +0.3 2.0 ABC transporter permease compare
MMJJ_RS02155 +0.3 1.9 DMT family transporter compare
MMJJ_RS01275 +0.3 1.3 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS02285 +0.3 0.6 class III signal peptide-containing protein compare
MMJJ_RS03320 +0.3 1.3 hypothetical protein compare
MMJJ_RS06515 +0.3 1.9 ribonuclease III compare
MMJJ_RS07650 +0.3 2.1 formate/nitrite transporter family protein compare
MMJJ_RS07200 +0.3 2.0 MFS transporter compare
MMJJ_RS08690 +0.3 1.8 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS01085 +0.3 1.0 hypothetical protein compare
MMJJ_RS04940 +0.3 1.6 XRE family transcriptional regulator compare
MMJJ_RS05505 +0.3 2.6 hypothetical protein compare
MMJJ_RS07215 +0.3 2.1 TIGR00341 family protein compare
MMJJ_RS01955 +0.3 2.3 hypothetical protein compare
MMJJ_RS01430 +0.3 1.6 hypothetical protein compare
MMJJ_RS06160 +0.3 1.9 stage II sporulation protein M compare
MMJJ_RS06800 +0.3 1.5 prefoldin subunit alpha compare
MMJJ_RS06810 +0.3 2.0 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS09265 +0.3 0.6 hypothetical protein compare
MMJJ_RS05685 +0.3 1.1 class III signal peptide-containing protein compare
MMJJ_RS01210 +0.3 0.7 hypothetical protein compare
MMJJ_RS06055 +0.3 1.7 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS04180 +0.3 0.7 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS05095 +0.3 2.2 ammonium transporter compare
MMJJ_RS09355 +0.3 0.7 hypothetical protein compare
MMJJ_RS05955 +0.3 2.0 radical SAM protein compare
MMJJ_RS02095 +0.3 1.3 DUF2124 family protein compare
MMJJ_RS07590 +0.3 1.7 flap endonuclease-1 compare
MMJJ_RS00055 +0.3 1.3 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS06460 +0.3 1.4 cytochrome c compare
MMJJ_RS07620 +0.3 1.8 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS06045 +0.3 1.5 hypothetical protein compare
MMJJ_RS05695 +0.3 1.3 class III signal peptide-containing protein compare
MMJJ_RS07830 +0.3 1.5 DUF1786 domain-containing protein compare
MMJJ_RS07445 +0.3 1.6 RlmF-related methyltransferase compare
MMJJ_RS04245 +0.3 1.5 flavoprotein compare
MMJJ_RS08215 +0.3 1.6 radical SAM protein compare
MMJJ_RS07610 +0.3 1.4 DUF2119 domain-containing protein compare
MMJJ_RS06075 +0.3 1.4 DNA-binding protein Alba compare
MMJJ_RS06135 +0.3 1.6 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS08170 +0.3 0.3 diaminopimelate decarboxylase compare
MMJJ_RS01060 +0.3 1.0 ABC transporter ATP-binding protein compare
MMJJ_RS01285 +0.3 1.2 CopG family ribbon-helix-helix protein compare
MMJJ_RS00605 +0.3 1.2 ABC transporter permease compare
MMJJ_RS07240 +0.3 2.0 MBL fold metallo-hydrolase compare
MMJJ_RS01110 +0.3 1.3 hypothetical protein compare
MMJJ_RS08555 +0.3 1.7 redox-regulated ATPase YchF compare
MMJJ_RS03955 +0.2 1.3 hypothetical protein compare
MMJJ_RS07385 +0.2 1.5 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS06120 +0.2 1.7 DUF4013 domain-containing protein compare
MMJJ_RS01985 +0.2 1.7 endonuclease III compare
MMJJ_RS04220 +0.2 1.4 helix-turn-helix transcriptional regulator compare
MMJJ_RS07860 +0.2 1.1 hypothetical protein compare
MMJJ_RS06640 +0.2 1.4 YfcE family phosphodiesterase compare
MMJJ_RS05240 +0.2 2.0 type II secretion system F family protein compare
MMJJ_RS01115 +0.2 1.1 hypothetical protein compare
MMJJ_RS06080 +0.2 1.7 serine/threonine protein kinase compare
MMJJ_RS08420 +0.2 2.0 uroporphyrinogen decarboxylase family protein compare
MMJJ_RS00150 +0.2 1.1 DUF2180 family protein compare
MMJJ_RS07795 +0.2 0.8 cupin domain-containing protein compare
MMJJ_RS07365 +0.2 1.6 CatB-related O-acetyltransferase compare
MMJJ_RS06280 +0.2 1.4 hypothetical protein compare
MMJJ_RS00885 +0.2 0.9 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS01640 +0.2 1.5 zinc ribbon domain-containing protein compare
MMJJ_RS08630 +0.2 1.0 signal recognition particle subunit SRP19/SEC65 family protein compare
MMJJ_RS04295 +0.2 1.6 DUF2202 domain-containing protein compare
MMJJ_RS06455 +0.2 1.4 YeeE/YedE family protein compare
MMJJ_RS07675 +0.2 1.6 ADP-specific phosphofructokinase compare
MMJJ_RS03910 +0.2 1.5 hypothetical protein compare
MMJJ_RS02185 +0.2 1.4 TIGR00296 family protein compare
MMJJ_RS02310 +0.2 1.4 ABC transporter ATP-binding protein compare
MMJJ_RS05895 +0.2 1.6 ABC transporter permease compare
MMJJ_RS05195 +0.2 0.6 hypothetical protein compare
MMJJ_RS08370 +0.2 0.8 hypothetical protein compare
MMJJ_RS08515 +0.2 0.6 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS05600 +0.2 1.6 sodium:solute symporter family protein compare
MMJJ_RS01155 +0.2 0.7 hypothetical protein compare
MMJJ_RS04215 +0.2 1.6 DMT family transporter compare
MMJJ_RS07835 +0.2 1.2 UPF0489 family protein compare
MMJJ_RS03250 +0.2 0.6 DUF2116 family Zn-ribbon domain-containing protein compare
MMJJ_RS08160 +0.2 1.0 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMJJ_RS03440 +0.2 1.1 hypothetical protein compare
MMJJ_RS04855 +0.2 1.4 ECF transporter S component compare
MMJJ_RS06470 +0.2 1.1 tripartite tricarboxylate transporter permease compare
MMJJ_RS01435 +0.2 1.4 4Fe-4S binding protein compare
MMJJ_RS01250 +0.2 0.6 hypothetical protein compare
MMJJ_RS08360 +0.2 1.5 FprA family A-type flavoprotein compare
MMJJ_RS07645 +0.2 1.1 selenium-binding protein compare
MMJJ_RS05335 +0.2 1.0 heavy metal-binding domain-containing protein compare
MMJJ_RS05110 +0.2 1.7 ammonium transporter compare
MMJJ_RS00435 +0.2 1.3 hypothetical protein compare
MMJJ_RS06540 +0.2 0.6 DUF2120 domain-containing protein compare
MMJJ_RS01440 +0.2 1.3 NCS2 family permease compare
MMJJ_RS05880 +0.2 1.7 hypothetical protein compare
MMJJ_RS05035 +0.2 0.9 4Fe-4S binding protein compare
MMJJ_RS01670 +0.2 0.7 hypothetical protein compare
MMJJ_RS02360 +0.2 0.8 hypothetical protein compare
MMJJ_RS06085 +0.2 0.8 proteasome assembly chaperone family protein compare
MMJJ_RS05235 +0.2 1.5 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS06790 +0.2 1.5 nucleotidyltransferase family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nitrogen source experiments

For nitrogen source Ammonium chloride across organisms