Experiment set3IT080 for Caulobacter crescentus NA1000

Compare to:

PYE with Nickel (II) chloride hexahydrate 0.3 mM

200 most detrimental genes:

  gene name fitness t score description  
CCNA_00362 +11.2 19.0 zinc uptake regulation protein compare
CCNA_03878 +3.0 5.1 ferrochelatase compare
CCNA_02849 +2.6 11.0 cytochrome c-type biogenesis heme chaperone compare
CCNA_02000 +2.5 4.4 SSU ribosomal protein S2P compare
CCNA_02848 +2.4 13.2 heme chaperone-apocytochrome heme-lyase compare
CCNA_03353 +2.4 14.1 metallophosphatase domain protein compare
CCNA_02535 +2.3 3.1 DNA topoisomerase I compare
CCNA_02250 +2.3 5.1 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_00852 +2.2 7.5 TetR family transcriptional regulator compare
CCNA_01251 +2.1 6.8 FepC-type transporter protein compare
CCNA_00011 +2.1 12.3 chaperone protein DnaJ compare
CCNA_03786 +2.1 12.4 heme chaperone heme-lyase compare
CCNA_01324 +2.1 9.2 LSU ribosomal protein L30P compare
CCNA_00766 +2.1 7.9 cobalamin adenosyltransferase family protein compare
CCNA_01603 +1.9 6.7 aspartate aminotransferase compare
CCNA_02075 +1.9 2.3 peptidoglycan binding endopeptidase DipM compare
CCNA_03030 +1.9 10.8 cytochrome c2 compare
CCNA_00684 +1.9 5.0 anti-sigma factor, ChrR-family compare
CCNA_01430 +1.9 7.8 hypothetical protein compare
CCNA_00043 +1.8 5.2 N utilization substance protein A NusA compare
CCNA_02387 +1.8 14.2 glutathione reductase compare
CCNA_00389 +1.7 2.4 aminomethyltransferase family protein compare
CCNA_01622 +1.7 4.8 Rsh ppGpp hydrolase-synthetase compare
CCNA_01815 +1.7 10.9 nitrogen assimilation regulatory protein NtrC compare
CCNA_01250 +1.7 8.4 FecCD-family transporter protein compare
CCNA_03783 +1.7 6.2 cytochrome c biogenesis ABC transporter permease component CcmB compare
CCNA_R0037 +1.7 4.2 tRNA-Glu compare
CCNA_00281 +1.7 2.7 methionyl-tRNA formyltransferase compare
CCNA_01959 +1.6 3.4 3-dehydroquinate dehydratase compare
CCNA_02458 +1.6 8.9 methylmalonyl-CoA mutase beta subunit compare
CCNA_00284 +1.6 2.9 pyrimidine 5'-nucleotidase family protein compare
CCNA_01712 +1.5 11.9 CopY/TcrY family transcriptional repressor compare
CCNA_02537 +1.5 11.3 ribonuclease R compare
CCNA_03982 +1.5 2.9 hypothetical protein compare
CCNA_01361 +1.5 3.9 PepSY superfamily protein compare
CCNA_01826 +1.5 7.6 vitamin B12 receptor compare
CCNA_01790 +1.5 5.1 protein translocase subunit secG compare
CCNA_01249 +1.5 4.5 ABC-transporter substrate binding protein compare
CCNA_01220 +1.4 7.3 7-keto-8-aminopelargonate synthetase compare
CCNA_00924 +1.4 9.4 MarR/EmrR family transcriptional regulator compare
CCNA_02459 +1.4 8.5 methylmalonyl-CoA mutase alpha subunit compare
CCNA_02103 +1.4 7.1 hypothetical protein compare
CCNA_02788 +1.3 1.6 Xre-family transcriptional regulator compare
CCNA_00190 +1.3 1.2 acyl-CoA hydrolase compare
CCNA_01814 +1.3 9.0 nitrogen regulation protein ntrB compare
CCNA_02745 +1.3 3.9 TetR-family transcriptional regulator compare
CCNA_00699 +1.3 5.1 LSU ribosomal protein L28P compare
CCNA_01060 +1.3 4.3 type I protein secretion ATP-binding protein RsaD compare
CCNA_00280 +1.3 7.6 tRNA pseudouridine synthase A compare
CCNA_02177 +1.2 3.3 hypothetical protein compare
CCNA_01457 +1.2 2.3 hypothetical protein compare
CCNA_01968 +1.2 3.7 pentapeptide repeats containing protein compare
CCNA_00872 +1.2 2.7 glutaredoxin compare
CCNA_03064 +1.2 7.3 PadR-family transcriptional regulator compare
CCNA_00224 +1.2 9.0 TonB-dependent receptor protein compare
CCNA_03043 +1.2 4.7 type IV pilin protein pilA compare
CCNA_02957 +1.2 4.8 ArsR-family transcriptional regulator compare
CCNA_01059 +1.2 9.7 S-layer protein rsaA compare
CCNA_03252 +1.2 8.2 CopY/TcrY-family transcriptional regulator compare
CCNA_01801 +1.2 4.3 hypothetical protein compare
CCNA_00892 +1.2 2.8 phosphoenolpyruvate-protein phosphotransferase PtsP compare
CCNA_01730 +1.2 6.6 amidophosphoribosyltransferase compare
CCNA_02315 +1.2 3.6 Cro/CI-family transcriptional regulator compare
CCNA_00939 +1.2 7.5 MarR-family transcriptional regulator compare
CCNA_02171 +1.2 8.3 nucleoside permease nupC compare
CCNA_02591 +1.2 3.8 glutaredoxin compare
CCNA_01094 +1.2 3.6 hypothetical protein compare
CCNA_01525 +1.1 5.8 flagellar biosynthesis repressor flbT compare
CCNA_03951 +1.1 3.6 hypothetical protein compare
CCNA_02252 +1.1 2.3 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_01840 +1.1 8.7 MerR-family transcriptional regulator compare
CCNA_01237 +1.1 1.3 hypothetical protein compare
CCNA_01011 +1.1 6.3 imidazolonepropionase compare
CCNA_02448 +1.1 8.0 hypothetical protein compare
CCNA_02289 +1.1 7.9 MarR/EmrR family transcriptional regulator compare
CCNA_02447 +1.1 7.9 PspA/IM30 family regulatory protein compare
CCNA_01526 +1.1 5.3 flagellar biosynthesis regulatory protein flaF compare
CCNA_00027 +1.1 1.7 2OG-Fe(II) oxygenase compare
CCNA_03072 +1.1 3.1 TetR-family transcriptional regulator compare
CCNA_03150 +1.1 1.7 hypothetical protein compare
CCNA_01684 +1.1 7.7 phenylalanine-4-hydroxylase compare
CCNA_00944 +1.1 3.2 flagellar hook length determination protein compare
CCNA_02242 +1.1 5.4 PHB granule-associated protein, phasin2 compare
CCNA_01979 +1.1 6.2 LexA repressor compare
CCNA_00036 +1.0 1.6 ribosome-binding factor A compare
CCNA_01219 +1.0 2.2 putative cytosolic protein compare
CCNA_03012 +1.0 6.2 peroxiredoxin compare
CCNA_03612 +1.0 6.4 HTH XRE-family transcriptional regulator compare
CCNA_03858 +1.0 7.8 protein translocase subunit secB compare
CCNA_03287 +1.0 5.2 PadR-family transcriptional regulator compare
CCNA_01739 +1.0 3.7 LSU ribosomal protein L9P compare
CCNA_00013 +1.0 7.9 protein-PII uridylyltransferase compare
CCNA_01802 +1.0 3.1 hypothetical protein compare
CCNA_02225 +1.0 5.8 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_03078 +1.0 1.2 Arc/MetJ-family transcriptional regulator compare
CCNA_02453 +1.0 2.4 protein tyrosine phosphatase compare
CCNA_00257 +1.0 2.8 adenosylhomocysteinase compare
CCNA_02328 +1.0 1.2 cell cycle regulatory protein GcrA compare
CCNA_02026 +1.0 3.8 hypothetical protein compare
CCNA_02037 +1.0 5.0 ATP-dependent endopeptidase Lon compare
CCNA_00999 +1.0 4.8 PAS-family motility and cell cycle regulatory protein MopJ compare
CCNA_00354 +1.0 6.2 NlpC/P60 CHAP domain amidase protein compare
CCNA_00962 +1.0 4.3 MarR-family transcriptional regulator compare
CCNA_03475 +1.0 3.1 homoserine kinase compare
CCNA_01995 +1.0 1.3 phosphatidate cytidylyltransferase compare
CCNA_03938 +1.0 4.3 hypothetical protein compare
CCNA_01780 +1.0 6.5 exopolyphosphatase compare
CCNA_02101 +1.0 1.7 glyoxalase family protein compare
CCNA_01618 +1.0 2.0 uracil-DNA glycosylase compare
CCNA_01058 +1.0 4.3 helix-turn-helix transcriptional regulator compare
CCNA_00347 +1.0 2.7 hypothetical protein compare
CCNA_02071 +1.0 1.2 protein translocase subunit YajC compare
CCNA_03970 +0.9 1.7 hypothetical protein compare
CCNA_03919 +0.9 2.8 hypothetical protein compare
CCNA_01728 +0.9 4.8 short chain dehydrogenase compare
CCNA_00080 +0.9 1.2 LexA-related transcriptional repressor compare
CCNA_02835 +0.9 2.8 CpxP-related protein compare
CCNA_03034 +0.9 1.7 hypothetical protein compare
CCNA_03713 +0.9 5.7 RNA polymerase sigma-54 factor rpoN compare
CCNA_01393 +0.9 7.2 soluble lytic murein transglycosylase compare
CCNA_03363 +0.9 2.4 hypothetical protein compare
CCNA_03954 +0.9 1.2 hypothetical protein compare
CCNA_01964 +0.9 2.0 NADH dehydrogenase compare
CCNA_03271 +0.9 7.3 methionine gamma-lyase compare
CCNA_03354 +0.9 3.1 5-formyltetrahydrofolate cyclo-ligase compare
CCNA_02980 +0.9 7.2 tryptophan 2,3-dioxygenase compare
CCNA_03214 +0.9 4.7 hypothetical protein compare
CCNA_03281 +0.9 6.6 AsnC-family transcriptional regulator compare
CCNA_02910 +0.9 7.8 TonB-dependent receptor compare
CCNA_01186 +0.9 4.2 hypothetical protein compare
CCNA_00161 +0.9 4.2 hypothetical protein compare
CCNA_01731 +0.9 3.6 colicin V production protein CvpA compare
CCNA_00846 +0.9 8.0 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_01242 +0.9 7.0 amino acid permease compare
CCNA_00870 +0.9 3.7 hypothetical protein compare
CCNA_02646 +0.9 0.9 cell division protein MraZ compare
CCNA_00670 +0.9 1.6 ABC-type polysaccharide/polyol phosphate transport system, ATPase component compare
CCNA_03689 +0.9 7.1 alanine dehydrogenase compare
CCNA_00785 +0.9 6.1 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC compare
CCNA_02012 +0.9 4.6 metal-dependent hydrolase compare
CCNA_01453 +0.9 4.4 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_01681 +0.9 3.6 RimI-like acetyltransferase compare
CCNA_00162 +0.9 4.8 hypothetical protein compare
CCNA_02339 +0.9 6.8 methyltransferase compare
CCNA_01406 +0.9 4.4 metal-dependent hydrolase compare
CCNA_01655 +0.9 4.7 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01447 +0.9 3.9 homoserine dehydrogenase compare
CCNA_02021 +0.9 3.4 hypothetical protein compare
CCNA_02836 +0.9 3.0 hypothetical protein compare
CCNA_02316 +0.8 4.8 hypothetical protein compare
CCNA_02133 +0.8 3.9 glucokinase compare
CCNA_01962 +0.8 2.5 leucyl/phenylalanyl-tRNA--protein transferase compare
CCNA_01014 +0.8 2.7 cysteinyl-tRNA(Pro) deacylase compare
CCNA_00392 +0.8 4.7 dihydroorotase compare
CCNA_02847 +0.8 2.6 cytochrome c-type biogenesis protein ccmH compare
CCNA_01851 +0.8 6.5 quinol cytochrome oxidase polypeptide II compare
CCNA_02617 +0.8 7.2 histidinol-phosphate aminotransferase compare
CCNA_00709 +0.8 3.0 hypothetical protein compare
CCNA_03893 +0.8 2.9 hypothetical protein compare
CCNA_00264 +0.8 4.0 C4-dicarboxylate transport protein compare
CCNA_00769 +0.8 5.2 TetR family transcriptional regulator compare
CCNA_03479 +0.8 5.4 MarR-family transcriptional regulator compare
CCNA_02081 +0.8 3.9 Sec-independent protein translocase protein tatB compare
CCNA_02341 +0.8 3.9 small heat shock protein compare
CCNA_00505 +0.8 3.9 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_00920 +0.8 4.5 hypothetical protein compare
CCNA_00752 +0.8 5.4 3-hydroxybutyryl-CoA dehydrogenase compare
CCNA_03918 +0.8 1.0 hypothetical protein compare
CCNA_01414 +0.8 5.2 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_03964 +0.8 1.9 hypothetical protein compare
CCNA_03129 +0.8 5.9 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01093 +0.8 1.8 hypothetical protein compare
CCNA_R0054 +0.8 1.3 tRNA-Gly compare
CCNA_02866 +0.8 3.7 hypothetical protein compare
CCNA_00998 +0.8 4.5 ROS/MUCR transcriptional regulator compare
CCNA_01722 +0.8 1.6 hypothetical protein compare
CCNA_02114 +0.8 1.2 hypothetical protein compare
CCNA_01848 +0.8 5.1 quinol cytochrome oxidase polypeptide IV compare
CCNA_02063 +0.8 3.8 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_02164 +0.8 2.6 glutamate dehydrogenase/leucine dehydrogenase compare
CCNA_01063 +0.8 5.5 UDP-perosamine 4-acetyl transferase compare
CCNA_03108 +0.8 6.8 TonB-dependent outer membrane receptor compare
CCNA_02297 +0.8 2.9 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_01008 +0.8 6.4 urocanate hydratase compare
CCNA_03062 +0.8 5.8 cell wall hydrolase family protein compare
CCNA_02073 +0.8 4.4 cupin domain transcriptional regulator compare
CCNA_03832 +0.8 2.7 TetR-family transcriptional regulator compare
CCNA_02324 +0.8 5.2 heat shock protein 33 hsp33 compare
CCNA_03519 +0.8 3.3 PadR-family transcriptional regulator compare
CCNA_00375 +0.8 3.5 hypothetical protein compare
CCNA_01678 +0.8 5.1 arginine N-succinyltransferase, beta chain compare
CCNA_02583 +0.8 2.7 phosphoribosylformylglycinamidine synthase I compare
CCNA_02953 +0.8 2.7 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase compare
CCNA_01173 +0.8 4.1 chorismate mutase compare
CCNA_02941 +0.8 1.6 transcription elongation factor greA compare
CCNA_03500 +0.8 5.0 FAD/FMN-containing dehydrogenase compare
CCNA_02042 +0.8 4.1 trigger factor chaperone compare
CCNA_01614 +0.8 0.9 hypothetical protein compare
CCNA_00945 +0.8 5.2 chemotaxis protein MotD compare
CCNA_03325 +0.8 4.1 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Nickel (II) chloride hexahydrate in Caulobacter crescentus NA1000

For stress Nickel (II) chloride hexahydrate across organisms