Experiment set3IT079 for Pseudomonas fluorescens FW300-N2E3

Compare to:

LB with Chloramphenicol 0.004 mg/ml

200 most important genes:

  gene name fitness t score description  
AO353_22685 -3.3 -4.9 peroxidase compare
AO353_14775 -2.9 -7.1 hypothetical protein compare
AO353_05130 -2.9 -2.8 anti-anti-sigma factor compare
AO353_00825 -2.9 -4.3 porin compare
AO353_10455 -2.8 -2.7 tRNA modification GTPase MnmE compare
AO353_03615 -2.7 -3.6 cold-shock protein compare
AO353_26835 -2.5 -4.7 transcriptional regulator compare
AO353_17290 -2.5 -6.5 multidrug transporter compare
AO353_04565 -2.5 -6.4 nucleoid-associated protein compare
AO353_12105 -2.5 -7.5 peptidase S41 compare
AO353_05145 -2.4 -6.4 ABC transporter permease compare
AO353_17295 -2.3 -16.0 multidrug transporter compare
AO353_09315 -2.3 -10.8 LysR family transcriptional regulator compare
AO353_03580 -2.3 -4.0 ATP-dependent DNA helicase RuvB compare
AO353_03590 -2.1 -4.2 crossover junction endodeoxyribonuclease RuvC compare
AO353_05140 -2.1 -7.7 outer membrane lipid asymmetry maintenance protein MlaD compare
AO353_05135 -2.0 -9.1 toluene tolerance protein compare
AO353_02250 -2.0 -4.3 chorismate synthase compare
AO353_00330 -1.9 -8.2 hypothetical protein compare
AO353_12115 -1.9 -2.6 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_00495 -1.9 -2.7 DNA topoisomerase I compare
AO353_11165 -1.9 -9.2 hypothetical protein compare
AO353_05690 -1.9 -3.6 SsrA-binding protein compare
AO353_05150 -1.8 -5.0 ABC transporter ATP-binding protein compare
AO353_06040 -1.8 -3.4 exodeoxyribonuclease V subunit alpha compare
AO353_18560 -1.8 -2.6 class I peptide chain release factor compare
AO353_06415 -1.8 -4.8 hypothetical protein compare
AO353_17300 -1.7 -6.6 antibiotic transporter compare
AO353_09890 -1.7 -4.8 phosphate ABC transporter ATP-binding protein compare
AO353_09320 -1.7 -8.1 ATP-dependent DNA helicase RecG compare
AO353_21625 -1.7 -3.0 Fe/S biogenesis protein NfuA compare
AO353_01405 -1.6 -6.7 23S rRNA pseudouridylate synthase compare
AO353_10930 -1.6 -7.0 DNA polymerase I compare
AO353_01220 -1.5 -2.6 hypothetical protein compare
AO353_03585 -1.5 -2.4 ATP-dependent DNA helicase RuvA compare
AO353_02685 -1.5 -4.1 phosphoribosylglycinamide formyltransferase compare
AO353_18540 -1.5 -2.4 pseudouridine synthase compare
AO353_15410 -1.5 -1.6 hypothetical protein compare
AO353_07645 -1.5 -1.9 sarcosine oxidase subunit gamma compare
AO353_12935 -1.4 -3.9 glycosyltransferase compare
AO353_26840 -1.4 -3.3 RND transporter compare
AO353_02265 -1.4 -6.3 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific conserved
AO353_03420 -1.4 -4.4 phosphogluconate dehydratase compare
AO353_17175 -1.4 -1.9 beta-ketoadipyl CoA thiolase compare
AO353_17410 -1.3 -2.5 arylsulfate sulfotransferase compare
AO353_27090 -1.3 -2.1 hypothetical protein compare
AO353_06045 -1.3 -5.5 exodeoxyribonuclease V subunit beta compare
AO353_09240 -1.3 -3.2 acetylglutamate kinase compare
AO353_00650 -1.3 -2.6 cytochrome biogenesis protein compare
AO353_09950 -1.3 -4.0 aspartate ammonia-lyase compare
AO353_09250 -1.3 -2.7 exodeoxyribonuclease III compare
AO353_05550 -1.3 -5.2 pseudouridine synthase compare
AO353_08115 -1.2 -4.5 energy transducer TonB compare
AO353_13715 -1.2 -3.1 translation initiation factor Sui1 compare
AO353_20565 -1.2 -1.3 tRNA-Ala compare
AO353_27650 -1.2 -3.9 cell division protein FtsK compare
AO353_16810 -1.2 -3.2 recombinase RecX compare
AO353_20185 -1.2 -4.6 DNA-binding protein compare
AO353_09905 -1.2 -6.3 phosphate-binding protein compare
AO353_11750 -1.2 -2.1 ATPase compare
AO353_11730 -1.1 -6.5 glutamate--cysteine ligase compare
AO353_09000 -1.1 -3.9 argininosuccinate lyase compare
AO353_04365 -1.1 -3.9 recombinase XerD compare
AO353_16805 -1.1 -4.3 recombinase RecA compare
AO353_03715 -1.1 -2.1 H-NS histone compare
AO353_12915 -1.0 -5.0 carbamoyltransferase compare
AO353_12945 -1.0 -5.1 toluene tolerance protein compare
AO353_02440 -1.0 -6.8 peptidase S41 compare
AO353_07155 -1.0 -4.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_06050 -1.0 -4.5 exodeoxyribonuclease V subunit gamma compare
AO353_20170 -1.0 -3.6 trigger factor compare
AO353_10510 -1.0 -1.5 benzoate transporter compare
AO353_21640 -1.0 -1.8 cobalt transporter compare
AO353_07315 -1.0 -2.0 rRNA methyltransferase compare
AO353_09045 -1.0 -2.0 hypothetical protein compare
AO353_10805 -1.0 -2.8 hypothetical protein compare
AO353_19145 -1.0 -3.1 protease HtpX compare
AO353_07355 -1.0 -3.6 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_02280 -0.9 -1.8 DNA mismatch repair protein MutS compare
AO353_05420 -0.9 -1.5 peptide chain release factor 3 compare
AO353_09050 -0.9 -2.7 recombinase XerC compare
AO353_26220 -0.9 -2.4 hypothetical protein compare
AO353_11770 -0.9 -1.6 molecular chaperone Hsp33 compare
AO353_25585 -0.9 -1.6 argininosuccinate lyase compare
AO353_14420 -0.9 -2.7 molecular chaperone DnaK compare
AO353_23220 -0.9 -2.1 hypothetical protein compare
AO353_26845 -0.9 -5.2 acriflavine resistance protein B compare
AO353_00430 -0.9 -2.6 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_15900 -0.9 -1.7 GTP-binding protein compare
AO353_28725 -0.9 -2.1 hypothetical protein compare
AO353_27410 -0.9 -2.0 hypothetical protein compare
AO353_08350 -0.9 -4.0 hypothetical protein compare
AO353_13040 -0.9 -4.3 esterase compare
AO353_18170 -0.8 -4.5 aspartyl beta-hydroxylase compare
AO353_12500 -0.8 -1.4 shikimate kinase compare
AO353_06585 -0.8 -3.9 hypothetical protein compare
AO353_04190 -0.8 -1.3 glycerol-3-phosphate dehydrogenase compare
AO353_11480 -0.8 -3.6 hypothetical protein compare
AO353_13140 -0.8 -3.6 tRNA dimethylallyltransferase compare
AO353_18225 -0.8 -4.7 ATP-dependent RNA helicase HrpA compare
AO353_15725 -0.8 -2.6 hypothetical protein compare
AO353_00115 -0.8 -1.8 hypothetical protein compare
AO353_09915 -0.8 -4.1 long-chain acyl-CoA thioester hydrolase compare
AO353_06455 -0.8 -1.6 D-alanyl-D-alanine carboxypeptidase compare
AO353_14940 -0.8 -2.5 malate:quinone oxidoreductase compare
AO353_16440 -0.8 -2.3 ArsC family transcriptional regulator compare
AO353_06265 -0.8 -4.3 DEAD/DEAH box helicase compare
AO353_14955 -0.8 -2.3 hypothetical protein compare
AO353_02190 -0.8 -5.5 hypothetical protein compare
AO353_07325 -0.8 -1.2 diadenosine tetraphosphatase compare
AO353_15185 -0.8 -2.8 ATPase compare
AO353_22800 -0.8 -2.0 sulfite reductase compare
AO353_15905 -0.8 -3.7 outer membrane protein assembly factor BamB compare
AO353_11915 -0.7 -3.8 agmatine deiminase compare
AO353_10985 -0.7 -1.8 hypothetical protein compare
AO353_26195 -0.7 -1.8 hypothetical protein compare
AO353_13720 -0.7 -5.7 arginine decarboxylase compare
AO353_26070 -0.7 -1.9 hypothetical protein compare
AO353_26945 -0.7 -1.5 transcriptional regulator compare
AO353_24745 -0.7 -1.6 hypothetical protein compare
AO353_19205 -0.7 -1.7 hypothetical protein compare
AO353_11920 -0.7 -1.2 hypothetical protein compare
AO353_19120 -0.7 -4.8 spermidine synthase compare
AO353_12470 -0.7 -5.5 peptidase compare
AO353_08245 -0.7 -1.5 cell division ATP-binding protein FtsE compare
AO353_21440 -0.7 -1.9 hypothetical protein compare
AO353_09030 -0.7 -1.2 iron donor protein CyaY compare
AO353_00605 -0.7 -3.3 cytochrome C oxidase Cbb3 compare
AO353_08880 -0.7 -1.5 exopolyphosphatase compare
AO353_03290 -0.7 -1.2 peptide deformylase compare
AO353_04355 -0.7 -1.2 homoserine dehydrogenase compare
AO353_18890 -0.7 -2.6 cytochrome C compare
AO353_08685 -0.7 -3.5 N-acetylglutamate synthase compare
AO353_29005 -0.7 -1.5 hypothetical protein compare
AO353_10055 -0.7 -4.7 DNA helicase II compare
AO353_04520 -0.7 -2.8 elongation factor 4 compare
AO353_16530 -0.7 -1.2 ribonuclease HII compare
AO353_09275 -0.7 -1.8 DNA-directed RNA polymerase subunit omega compare
AO353_13225 -0.7 -1.4 50S ribosomal protein L9 compare
AO353_04650 -0.7 -1.5 molybdenum cofactor biosynthesis protein MoaE compare
AO353_16915 -0.7 -4.3 hypothetical protein compare
AO353_21810 -0.7 -2.5 alpha/beta hydrolase compare
AO353_02990 -0.7 -2.1 6,7-dimethyl-8-ribityllumazine synthase compare
AO353_11255 -0.7 -2.1 RND transporter compare
AO353_11780 -0.7 -1.6 hypothetical protein compare
AO353_14115 -0.7 -3.2 gamma-glutamyl kinase compare
AO353_13200 -0.7 -4.4 exoribonuclease R compare
AO353_02810 -0.6 -3.5 histidine kinase compare
AO353_09040 -0.6 -0.6 diaminopimelate epimerase compare
AO353_07555 -0.6 -1.1 glycine cleavage system protein R compare
AO353_25990 -0.6 -2.9 aspartyl beta-hydroxylase compare
AO353_10780 -0.6 -0.9 DNA-binding protein compare
AO353_13640 -0.6 -2.4 histidine kinase compare
AO353_06775 -0.6 -3.3 dTDP-4-dehydrorhamnose reductase compare
AO353_22810 -0.6 -1.0 hypothetical protein compare
AO353_12055 -0.6 -2.7 cell envelope biogenesis protein AsmA compare
AO353_03130 -0.6 -1.4 hypothetical protein compare
AO353_08015 -0.6 -3.3 5,10-methylenetetrahydrofolate reductase compare
AO353_14990 -0.6 -1.4 hypothetical protein compare
AO353_09900 -0.6 -4.4 phosphate ABC transporter permease compare
AO353_00460 -0.6 -1.3 TetR family transcriptional regulator compare
AO353_17085 -0.6 -1.6 hypothetical protein compare
AO353_03005 -0.6 -2.7 succinylarginine dihydrolase compare
AO353_14220 -0.6 -0.5 ribosomal large subunit pseudouridine synthase D compare
AO353_12110 -0.6 -3.5 peptidase M23 compare
AO353_16375 -0.6 -1.6 hypothetical protein compare
AO353_15445 -0.6 -1.8 disulfide bond formation protein B compare
AO353_05010 -0.6 -1.4 HopJ type III effector protein compare
AO353_07900 -0.6 -1.4 hypothetical protein compare
AO353_08165 -0.6 -1.4 pyrroline-5-carboxylate reductase compare
AO353_12130 -0.6 -2.5 preprotein translocase subunit SecB compare
AO353_02450 -0.6 -2.6 hypothetical protein compare
AO353_23165 -0.6 -1.8 cupin compare
AO353_23005 -0.6 -1.5 hypothetical protein compare
AO353_27695 -0.6 -3.2 isocitrate dehydrogenase compare
AO353_07465 -0.6 -1.5 addiction module toxin RelE compare
AO353_08855 -0.6 -2.0 GntR family transcriptional regulator compare
AO353_01190 -0.6 -0.8 hypothetical protein compare
AO353_13155 -0.6 -1.8 hypothetical protein compare
AO353_23575 -0.6 -1.9 hypothetical protein compare
AO353_24490 -0.6 -2.8 osmotically inducible protein OsmC compare
AO353_01915 -0.6 -0.9 GlcG protein compare
AO353_09345 -0.6 -1.3 hypothetical protein compare
AO353_00835 -0.6 -2.6 transporter compare
AO353_03595 -0.6 -1.8 hypothetical protein compare
AO353_02345 -0.6 -2.1 purine permease compare
AO353_23155 -0.6 -1.9 IclR family transcriptional regulator compare
AO353_27000 -0.6 -1.2 hypothetical protein compare
AO353_08510 -0.6 -2.3 3-phosphoglycerate dehydrogenase compare
AO353_09860 -0.5 -3.6 histidine kinase compare
AO353_07515 -0.5 -1.0 transporter compare
AO353_15460 -0.5 -2.8 cytochrome o ubiquinol oxidase subunit III compare
AO353_12390 -0.5 -1.5 poly(3-hydroxyalkanoate) granule-associated protein PhaI compare
AO353_00195 -0.5 -1.1 virion morphogenesis protein compare
AO353_21095 -0.5 -2.2 glutamine cyclotransferase compare
AO353_25750 -0.5 -2.2 hypothetical protein compare
AO353_03795 -0.5 -1.8 fumarate hydratase compare
AO353_08945 -0.5 -2.9 ABC transporter ATP-binding protein compare
AO353_27550 -0.5 -1.0 hypothetical protein compare
AO353_10320 -0.5 -1.0 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Chloramphenicol in Pseudomonas fluorescens FW300-N2E3

For stress Chloramphenicol across organisms