Experiment set3IT078 for Methanococcus maripaludis JJ

Compare to:

H2 N-free with 10mM Ammonium chloride

200 most important genes:

  gene name fitness t score description  
MMJJ_RS02035 -6.0 -7.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS03270 -5.5 -2.3 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS03670 -5.1 -3.5 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS03615 -5.1 -2.9 cobalt-precorrin-8 methylmutase compare
MMJJ_RS02920 -5.1 -2.1 30S ribosomal protein S27ae compare
MMJJ_RS02045 -5.0 -3.4 molybdenum cofactor guanylyltransferase compare
MMJJ_RS05450 -4.9 -16.6 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMJJ_RS06625 -4.9 -2.1 pyruvate synthase subunit PorB compare
MMJJ_RS05590 -4.8 -2.0 homoserine dehydrogenase compare
MMJJ_RS04520 -4.7 -6.4 coenzyme F430 synthase compare
MMJJ_RS00210 -4.7 -2.2 DUF530 family protein compare
MMJJ_RS04485 -4.5 -8.4 riboflavin synthase compare
MMJJ_RS05650 -4.5 -2.7 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS04995 -4.4 -6.1 Tfx family DNA-binding protein compare
MMJJ_RS06040 -4.4 -4.4 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS08660 -4.4 -2.7 acetylornithine transaminase compare
MMJJ_RS01870 -4.2 -2.0 methanogenesis marker 15 protein compare
MMJJ_RS08095 -4.2 -4.1 cobyric acid synthase CobQ compare
MMJJ_RS06485 -4.2 -2.5 phosphoglycerate kinase compare
MMJJ_RS05930 -4.2 -2.0 cell division protein SepF compare
MMJJ_RS03125 -4.2 -4.9 GMC oxidoreductase compare
MMJJ_RS06225 -4.2 -1.9 adenosylmethionine decarboxylase compare
MMJJ_RS03580 -4.1 -3.8 TIGR00303 family protein compare
MMJJ_RS02200 -4.1 -11.9 chorismate pyruvate-lyase family protein compare
MMJJ_RS03895 -4.0 -3.8 hydrogenase expression/formation protein HypE compare
MMJJ_RS04155 -4.0 -7.5 hypothetical protein compare
MMJJ_RS03840 -4.0 -3.9 DHH family phosphoesterase compare
MMJJ_RS05490 -4.0 -2.3 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS08870 -4.0 -1.2 2-isopropylmalate synthase compare
MMJJ_RS07980 -4.0 -12.9 biotin synthase BioB compare
MMJJ_RS01810 -3.9 -2.2 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS00355 -3.9 -3.0 ribonuclease P protein component 4 compare
MMJJ_RS09190 -3.9 -2.0 tryptophan synthase subunit beta compare
MMJJ_RS06240 -3.9 -3.3 dihydropteroate synthase-like protein compare
MMJJ_RS00275 -3.9 -2.7 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS00560 -3.9 -4.5 homoisocitrate dehydrogenase compare
MMJJ_RS04790 -3.8 -4.6 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS05595 -3.8 -3.7 hypothetical protein compare
MMJJ_RS05950 -3.8 -3.2 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS00570 -3.8 -2.0 ribonuclease P compare
MMJJ_RS03785 -3.8 -2.1 hypothetical protein compare
MMJJ_RS07190 -3.8 -3.6 RtcB family protein compare
MMJJ_RS03760 -3.8 -4.1 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS05810 -3.8 -7.6 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS06490 -3.8 -2.8 methanogenesis marker 2 protein compare
MMJJ_RS03110 -3.7 -4.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS00425 -3.7 -3.8 hypothetical protein compare
MMJJ_RS09375 -3.7 -1.8 hypothetical protein compare
MMJJ_RS07705 -3.7 -3.8 GTP-binding protein EngB compare
MMJJ_RS06875 -3.7 -3.0 hypothetical protein compare
MMJJ_RS00645 -3.6 -13.5 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS05330 -3.6 -2.0 DNA polymerase II large subunit compare
MMJJ_RS08080 -3.6 -9.6 TIGR00300 family protein compare
MMJJ_RS06725 -3.6 -14.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS05575 -3.6 -5.0 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS07380 -3.6 -11.5 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS04475 -3.6 -4.5 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS07945 -3.6 -3.3 4Fe-4S binding protein compare
MMJJ_RS05995 -3.6 -2.2 ATP-binding cassette domain-containing protein compare
MMJJ_RS06270 -3.5 -10.1 dethiobiotin synthase compare
MMJJ_RS08795 -3.5 -3.0 phosphoglucosamine mutase compare
MMJJ_RS07350 -3.5 -3.1 4Fe-4S binding protein compare
MMJJ_RS03150 -3.5 -7.1 2-phospho-L-lactate transferase compare
MMJJ_RS06180 -3.5 -2.8 tryptophan--tRNA ligase compare
MMJJ_RS05260 -3.5 -7.6 ATP-grasp domain-containing protein compare
MMJJ_RS03200 -3.5 -2.2 uroporphyrinogen-III synthase compare
MMJJ_RS00270 -3.5 -3.9 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS03060 -3.5 -3.4 methanogenesis marker 7 protein compare
MMJJ_RS01600 -3.4 -3.4 radical SAM protein compare
MMJJ_RS06840 -3.4 -4.6 nickel-dependent hydrogenase large subunit compare
MMJJ_RS00450 -3.4 -1.9 DUF126 domain-containing protein compare
MMJJ_RS06695 -3.4 -3.4 amidohydrolase compare
MMJJ_RS03055 -3.4 -3.3 hypothetical protein compare
MMJJ_RS06220 -3.4 -6.0 polyamine aminopropyltransferase compare
MMJJ_RS07470 -3.4 -1.9 50S ribosome-binding GTPase compare
MMJJ_RS05445 -3.4 -2.1 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS06600 -3.3 -2.1 DUF555 domain-containing protein compare
MMJJ_RS06155 -3.3 -6.2 phosphatidylglycerophosphatase A compare
MMJJ_RS08625 -3.3 -7.0 magnesium/cobalt transporter CorA compare
MMJJ_RS04675 -3.3 -8.7 thiamine pyrophosphate-binding protein compare
MMJJ_RS00580 -3.3 -1.9 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS07715 -3.3 -3.5 UbiD family decarboxylase compare
MMJJ_RS06390 -3.2 -2.2 NADPH-dependent F420 reductase compare
MMJJ_RS06760 -3.2 -5.1 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS05610 -3.2 -5.5 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS04110 -3.2 -7.4 hypothetical protein compare
MMJJ_RS07170 -3.2 -3.1 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS04800 -3.2 -6.3 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS03170 -3.1 -9.1 DUF5612 domain-containing protein compare
MMJJ_RS01815 -3.1 -4.9 DUF134 domain-containing protein compare
MMJJ_RS03005 -3.1 -4.5 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS08840 -3.1 -4.9 calcium/sodium antiporter compare
MMJJ_RS04970 -3.0 -2.0 DUF655 domain-containing protein compare
MMJJ_RS04730 -3.0 -2.8 tyrosine decarboxylase MfnA compare
MMJJ_RS08010 -3.0 -8.0 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS04200 -3.0 -4.5 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS01935 -3.0 -4.9 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS09175 -3.0 -1.2 anthranilate synthase component I compare
MMJJ_RS05065 -3.0 -4.5 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS03820 -3.0 -4.7 hydrogenase formation protein HypD compare
MMJJ_RS06805 -3.0 -2.8 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS08330 -3.0 -3.3 SufD family Fe-S cluster assembly protein compare
MMJJ_RS06510 -2.9 -2.9 LL-diaminopimelate aminotransferase compare
MMJJ_RS06880 -2.9 -1.7 EhaG family protein compare
MMJJ_RS05720 -2.9 -2.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS01750 -2.9 -2.4 ferrous iron transport protein A compare
MMJJ_RS04050 -2.9 -2.0 dihydroneopterin aldolase family protein compare
MMJJ_RS06730 -2.9 -6.9 ATP-binding cassette domain-containing protein compare
MMJJ_RS04685 -2.9 -9.4 carbamoyltransferase HypF compare
MMJJ_RS02275 -2.9 -4.6 nucleotidyltransferase domain-containing protein compare
MMJJ_RS01350 -2.9 -6.6 sodium:proton antiporter compare
MMJJ_RS05620 -2.9 -5.7 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS06905 -2.9 -2.2 hypothetical protein compare
MMJJ_RS06260 -2.9 -7.8 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS08850 -2.9 -2.4 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS04010 -2.9 -6.9 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS04975 -2.8 -2.0 glycosyltransferase family 4 protein compare
MMJJ_RS05225 -2.8 -1.4 Gar1/Naf1 family protein compare
MMJJ_RS00600 -2.8 -2.6 hydroxymethylbilane synthase compare
MMJJ_RS03830 -2.8 -12.2 CBS domain-containing protein compare
MMJJ_RS08035 -2.8 -7.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS07720 -2.8 -1.6 UPF0058 family protein compare
MMJJ_RS00345 -2.8 -11.2 4-hydroxy-tetrahydrodipicolinate reductase compare
MMJJ_RS01755 -2.7 -2.4 ferrous iron transport protein B compare
MMJJ_RS07785 -2.7 -2.6 fumarate reductase subunit A compare
MMJJ_RS06010 -2.7 -5.3 hypothetical protein compare
MMJJ_RS03865 -2.7 -1.6 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS04700 -2.7 -6.8 deoxyhypusine synthase compare
MMJJ_RS03095 -2.7 -2.5 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS03620 -2.7 -5.2 DUF2097 domain-containing protein compare
MMJJ_RS07950 -2.7 -2.7 4Fe-4S binding protein compare
MMJJ_RS05070 -2.6 -2.2 DNA primase catalytic subunit PriS compare
MMJJ_RS07275 -2.6 -3.0 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS05710 -2.6 -5.1 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS01820 -2.6 -5.4 MJ1244 family protein compare
MMJJ_RS03845 -2.6 -5.9 translation initiation factor IF-2 compare
MMJJ_RS06750 -2.6 -2.1 homoaconitase large subunit compare
MMJJ_RS02090 -2.6 -5.4 tyramine--L-glutamate ligase compare
MMJJ_RS01360 -2.6 -2.3 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS03660 -2.6 -3.2 DUF447 family protein compare
MMJJ_RS05415 -2.6 -1.6 hypothetical protein compare
MMJJ_RS04565 -2.5 -3.5 sirohydrochlorin nickelochelatase compare
MMJJ_RS04980 -2.5 -5.1 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS08535 -2.5 -3.1 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS05380 -2.5 -1.2 hypothetical protein compare
MMJJ_RS05655 -2.5 -5.0 HisA/HisF family protein compare
MMJJ_RS07875 -2.5 -1.9 FAD-dependent oxidoreductase compare
MMJJ_RS07725 -2.5 -6.2 DNA primase DnaG compare
MMJJ_RS08155 -2.5 -3.5 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS09100 -2.4 -8.4 COG1361 S-layer family protein compare
MMJJ_RS07245 -2.4 -4.8 amidohydrolase family protein compare
MMJJ_RS08855 -2.4 -5.0 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS06930 -2.4 -2.5 type II methionyl aminopeptidase compare
MMJJ_RS09095 -2.4 -9.6 MMPL family transporter compare
MMJJ_RS08250 -2.4 -5.5 hydrogenase maturation peptidase HycI compare
MMJJ_RS05295 -2.4 -8.9 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS04650 -2.3 -6.3 nitrogenase iron protein compare
MMJJ_RS00125 -2.3 -2.4 KEOPS complex subunit Cgi121 compare
MMJJ_RS06265 -2.3 -11.5 8-amino-7-oxononanoate synthase compare
MMJJ_RS01345 -2.3 -3.8 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS06650 -2.3 -10.9 cell division protein FtsZ compare
MMJJ_RS08340 -2.3 -5.5 archaeoflavoprotein AfpA compare
MMJJ_RS00430 -2.3 -2.5 ribonuclease Z compare
MMJJ_RS06655 -2.3 -7.6 transcriptional regulator compare
MMJJ_RS08620 -2.2 -3.9 DUF373 family protein compare
MMJJ_RS06170 -2.2 -8.9 hypothetical protein compare
MMJJ_RS07410 -2.2 -4.0 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS04670 -2.2 -3.8 DUF2117 domain-containing protein compare
MMJJ_RS07015 -2.2 -1.5 PFL family protein compare
MMJJ_RS04505 -2.2 -6.9 CDC48 family AAA ATPase compare
MMJJ_RS06910 -2.2 -2.8 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS04615 -2.2 -2.9 methanogenesis marker 3 protein compare
MMJJ_RS08230 -2.2 -3.3 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS03065 -2.2 -10.4 CBS domain-containing protein compare
MMJJ_RS01200 -2.2 -2.5 PRC-barrel domain-containing protein compare
MMJJ_RS03230 -2.2 -4.4 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS07000 -2.2 -1.6 TrkH family potassium uptake protein compare
MMJJ_RS08020 -2.2 -7.5 nucleotidyltransferase domain-containing protein compare
MMJJ_RS04145 -2.2 -6.2 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS01880 -2.1 -2.1 RlmE family RNA methyltransferase compare
MMJJ_RS06250 -2.1 -2.4 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS06000 -2.1 -4.8 cation:proton antiporter subunit C compare
MMJJ_RS01690 -2.1 -2.7 methanogenesis marker 12 protein compare
MMJJ_RS07005 -2.1 -4.7 transcription factor S compare
MMJJ_RS03920 -2.1 -9.7 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS03295 -2.1 -11.0 PHP domain-containing protein compare
MMJJ_RS01565 -2.0 -8.4 TIGR00267 family protein compare
MMJJ_RS04150 -2.0 -2.3 DUF5379 domain-containing protein compare
MMJJ_RS05765 -2.0 -1.2 flagellar protein E compare
MMJJ_RS02055 -2.0 -10.0 GTP 3',8-cyclase MoaA compare
MMJJ_RS00370 -2.0 -1.6 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS08055 -2.0 -5.9 methanogenesis marker 14 protein compare
MMJJ_RS06860 -2.0 -3.4 hypothetical protein compare
MMJJ_RS06855 -2.0 -1.5 DUF2104 domain-containing protein compare
MMJJ_RS01875 -2.0 -5.0 global nitrogen regulator NrpR compare
MMJJ_RS03190 -2.0 -2.3 phosphopyruvate hydratase compare
MMJJ_RS00475 -2.0 -1.8 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS06255 -2.0 -4.9 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS06110 -1.9 -1.9 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS04760 -1.9 -13.5 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nitrogen source experiments

For nitrogen source Ammonium chloride across organisms