Experiment set3IT077 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08940 +1.1 3.2 MetS family NSS transporter small subunit compare
MMP_RS08860 +0.7 5.2 MinD/ParA family protein compare
MMP_RS01195 +0.7 1.9 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08855 +0.7 5.4 hypothetical protein compare
MMP_RS09055 +0.7 1.5 CAP domain-containing protein compare
MMP_RS01280 +0.6 5.6 DUF515 domain-containing protein compare
MMP_RS04015 +0.6 2.7 hypothetical protein compare
MMP_RS01305 +0.6 5.8 hypothetical protein compare
MMP_RS01310 +0.6 5.6 hypothetical protein compare
MMP_RS01085 +0.6 2.2 hypothetical protein compare
MMP_RS08615 +0.6 1.3 flagellar protein G compare
MMP_RS01290 +0.6 5.3 class III signal peptide-containing protein compare
MMP_RS01295 +0.6 4.9 hypothetical protein compare
MMP_RS01570 +0.6 1.8 hypothetical protein compare
MMP_RS08675 +0.6 3.1 class III signal peptide-containing protein compare
MMP_RS01285 +0.6 5.3 hypothetical protein compare
MMP_RS01315 +0.6 5.6 DUF2341 domain-containing protein compare
MMP_RS00240 +0.6 5.2 type II secretion system F family protein compare
MMP_RS01275 +0.6 4.2 class III signal peptide-containing protein compare
MMP_RS00245 +0.5 5.0 type II secretion system F family protein compare
MMP_RS00250 +0.5 4.7 Flp pilus assembly complex ATPase component TadA compare
MMP_RS00130 +0.5 1.2 nickel-responsive transcriptional regulator NikR compare
MMP_RS01270 +0.5 4.5 prepilin peptidase compare
MMP_RS05985 +0.5 2.3 hypothetical protein compare
MMP_RS05865 +0.5 1.7 hypothetical protein compare
MMP_RS01075 +0.5 1.9 hypothetical protein compare
MMP_RS08750 +0.5 1.2 hypothetical protein compare
MMP_RS01790 +0.4 3.2 restriction endonuclease compare
MMP_RS08580 +0.4 3.0 flagellin compare
MMP_RS08845 +0.4 2.9 archaellum operon transcriptional activator EarA family protein compare
MMP_RS01110 +0.4 1.7 FmdE family protein compare
MMP_RS04410 +0.4 2.2 hypothetical protein compare
MMP_RS00655 +0.4 2.2 hypothetical protein compare
MMP_RS04125 +0.4 2.6 TetR/AcrR family transcriptional regulator compare
MMP_RS06760 +0.4 1.2 hypothetical protein compare
MMP_RS07840 +0.4 1.8 ribonuclease III compare
MMP_RS08160 +0.4 3.0 EamA family transporter compare
MMP_RS03080 +0.4 1.1 universal stress protein compare
MMP_RS07775 +0.4 1.9 alanine dehydrogenase compare
MMP_RS03340 +0.4 0.6 ABC transporter ATP-binding protein compare
MMP_RS03300 +0.4 0.6 TOBE domain-containing protein compare
MMP_RS00570 +0.4 0.8 protein-L-isoaspartate O-methyltransferase compare
MMP_RS01630 +0.4 2.6 N-glycosylase/DNA lyase compare
MMP_RS07765 +0.4 2.4 sodium:alanine symporter family protein compare
MMP_RS04145 +0.4 1.2 hypothetical protein compare
MMP_RS01255 +0.4 2.3 amino acid ABC transporter ATP-binding protein compare
MMP_RS06110 +0.3 1.1 ATP-dependent protease LonB compare
MMP_RS07330 +0.3 3.1 membrane protein compare
MMP_RS05315 +0.3 1.0 hypothetical protein compare
MMP_RS01870 +0.3 2.0 acyl-CoA dehydratase activase compare
MMP_RS08290 +0.3 2.3 DNA-binding protein Alba compare
MMP_RS07860 +0.3 0.4 hypothetical protein compare
MMP_RS01125 +0.3 2.0 thioredoxin family protein compare
MMP_RS06035 +0.3 2.6 glycosyltransferase family 2 protein compare
MMP_RS07415 +0.3 1.8 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS08410 +0.3 1.8 DUF169 domain-containing protein compare
MMP_RS06840 +0.3 0.5 DNA-directed RNA polymerase subunit N compare
MMP_RS08080 +0.3 1.8 YchF/TatD family DNA exonuclease compare
MMP_RS07880 +0.3 2.0 AAA family ATPase compare
MMP_RS08850 +0.3 2.8 hypothetical protein compare
MMP_RS08075 +0.3 1.8 DUF749 domain-containing protein compare
MMP_RS02545 +0.3 1.2 hypothetical protein compare
MMP_RS05975 +0.3 0.9 hypothetical protein compare
MMP_RS07800 +0.3 1.7 ATP-binding cassette domain-containing protein compare
MMP_RS02605 +0.3 0.4 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS03490 +0.3 1.0 DUF2115 domain-containing protein compare
MMP_RS08980 +0.3 1.7 hypothetical protein compare
MMP_RS07640 +0.3 2.0 mechanosensitive ion channel family protein compare
MMP_RS07615 +0.3 1.9 energy-coupling factor ABC transporter permease compare
MMP_RS00400 +0.3 2.2 tributyrin esterase compare
MMP_RS03895 +0.3 1.6 hypothetical protein compare
MMP_RS01635 +0.3 1.8 thiamine pyrophosphate-dependent enzyme compare
MMP_RS03965 +0.3 1.1 hypothetical protein compare
MMP_RS07905 +0.3 1.6 DUF3343 domain-containing protein compare
MMP_RS08275 +0.3 2.1 hypothetical protein compare
MMP_RS06735 +0.3 1.4 class I SAM-dependent rRNA methyltransferase compare
MMP_RS03550 +0.3 0.8 DUF2124 domain-containing protein compare
MMP_RS06385 +0.3 1.3 hypothetical protein compare
MMP_RS08485 +0.3 1.9 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS06140 +0.3 0.8 radical SAM protein compare
MMP_RS00345 +0.3 1.6 DUF2666 domain-containing protein compare
MMP_RS02295 +0.3 2.1 TatD family hydrolase compare
MMP_RS00535 +0.3 1.4 TIGR00375 family protein compare
MMP_RS01685 +0.2 1.3 indolepyruvate oxidoreductase subunit beta compare
MMP_RS07805 +0.2 1.8 ABC transporter permease compare
MMP_RS06720 +0.2 1.4 response regulator transcription factor compare
MMP_RS08395 +0.2 1.6 DsrE family protein compare
MMP_RS05635 +0.2 1.8 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS07985 +0.2 2.0 nitroreductase family protein compare
MMP_RS06915 +0.2 1.3 metallophosphoesterase compare
MMP_RS08380 +0.2 1.3 phosphatase PAP2 family protein compare
MMP_RS07620 +0.2 1.0 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS08610 +0.2 1.8 flagellar protein F compare
MMP_RS02045 +0.2 0.7 tRNA-Met compare
MMP_RS07960 +0.2 1.8 sugar phosphate isomerase/epimerase compare
MMP_RS07150 +0.2 1.5 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS03625 +0.2 1.4 cell wall-binding protein compare
MMP_RS06175 +0.2 1.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS08455 +0.2 1.4 multiprotein bridging factor aMBF1 compare
MMP_RS08310 +0.2 0.8 TMEM165/GDT1 family protein compare
MMP_RS02020 +0.2 1.2 gamma-glutamylcyclotransferase compare
MMP_RS07590 +0.2 1.9 hypothetical protein compare
MMP_RS08400 +0.2 0.7 MJ0307 family thioredoxin compare
MMP_RS06935 +0.2 1.3 protease complex subunit PrcB family protein compare
MMP_RS02965 +0.2 1.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS05435 +0.2 1.7 5'/3'-nucleotidase SurE compare
MMP_RS07625 +0.2 0.8 cobalt ECF transporter T component CbiQ compare
MMP_RS06050 +0.2 1.4 ZIP family metal transporter compare
MMP_RS03320 +0.2 0.9 metal-dependent transcriptional regulator compare
MMP_RS01135 +0.2 1.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS05155 +0.2 1.1 hypothetical protein compare
MMP_RS07890 +0.2 0.9 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS01150 +0.2 1.5 aldo/keto reductase compare
MMP_RS02805 +0.2 0.5 HEPN domain-containing protein compare
MMP_RS06665 +0.2 1.7 glycogen/starch synthase compare
MMP_RS03440 +0.2 0.5 MoaD/ThiS family protein compare
MMP_RS02695 +0.2 1.3 formylmethanofuran dehydrogenase subunit A compare
MMP_RS02260 +0.2 1.4 lactate utilization protein compare
MMP_RS04610 +0.2 1.2 Dabb family protein compare
MMP_RS08285 +0.2 1.4 serine/threonine protein kinase compare
MMP_RS05970 +0.2 1.3 class II SORL domain-containing protein compare
MMP_RS06685 +0.2 1.7 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS05270 +0.2 1.7 PEGA domain-containing protein compare
MMP_RS06965 +0.2 1.6 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS08130 +0.2 1.7 IGHMBP2 family helicase compare
MMP_RS07925 +0.2 1.3 haloacid dehalogenase compare
MMP_RS03670 +0.2 1.5 DUF1890 domain-containing protein compare
MMP_RS09045 +0.2 1.7 class III signal peptide-containing protein compare
MMP_RS06700 +0.2 1.6 hypothetical protein compare
MMP_RS05090 +0.2 1.5 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS03765 +0.2 1.4 CopG family ribbon-helix-helix protein compare
MMP_RS07770 +0.2 1.1 alanine racemase compare
MMP_RS00990 +0.2 0.7 hypothetical protein compare
MMP_RS08640 +0.2 1.3 TIM barrel protein compare
MMP_RS06910 +0.2 1.3 RlmF-related methyltransferase compare
MMP_RS04205 +0.2 1.4 carboxymuconolactone decarboxylase family protein compare
MMP_RS05965 +0.2 1.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS02215 +0.2 1.5 ECF transporter S component compare
MMP_RS03585 +0.2 0.9 Hsp20/alpha crystallin family protein compare
MMP_RS02670 +0.2 1.4 ATP-binding cassette domain-containing protein compare
MMP_RS00140 +0.2 1.4 DUF192 domain-containing protein compare
MMP_RS07685 +0.2 1.5 TIGR01212 family radical SAM protein compare
MMP_RS08480 +0.2 1.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS03840 +0.2 1.2 hypothetical protein compare
MMP_RS04030 +0.2 1.0 hypothetical protein compare
MMP_RS08390 +0.2 1.2 DUF5400 domain-containing protein compare
MMP_RS02740 +0.2 1.0 hypothetical protein compare
MMP_RS07910 +0.2 1.3 NAD(P)H-hydrate dehydratase compare
MMP_RS05910 +0.2 0.5 cell division ATPase MinD compare
MMP_RS07570 +0.2 1.3 nucleotidyltransferase family protein compare
MMP_RS08775 +0.2 1.1 methanogenesis marker 9 domain-containing protein compare
MMP_RS05675 +0.2 0.9 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS05490 +0.2 1.3 IMPACT family protein compare
MMP_RS04190 +0.2 1.1 hypothetical protein compare
MMP_RS06515 +0.2 0.9 UPF0489 family protein compare
MMP_RS06115 +0.2 1.4 class II aldolase/adducin family protein compare
MMP_RS04995 +0.2 1.2 hypothetical protein compare
MMP_RS06445 +0.2 1.0 DUF89 domain-containing protein compare
MMP_RS07550 +0.2 1.2 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS02320 +0.2 1.3 glutamate-cysteine ligase family protein compare
MMP_RS08405 +0.2 1.2 MFS transporter compare
MMP_RS04595 +0.2 1.0 hypothetical protein compare
MMP_RS01490 +0.2 1.2 tetratricopeptide repeat protein compare
MMP_RS02540 +0.2 1.0 DUF2283 domain-containing protein compare
MMP_RS02530 +0.2 1.0 type II toxin-antitoxin system mRNA interferase toxin RelE/StbE family compare
MMP_RS07595 +0.2 1.3 hypothetical protein compare
MMP_RS06655 +0.2 1.3 glycoside hydrolase family 15 protein compare
MMP_RS03900 +0.2 1.1 minichromosome maintenance protein MCM compare
MMP_RS07900 +0.2 0.5 YeeE/YedE family protein compare
MMP_RS08830 +0.2 0.8 GTP-binding protein compare
MMP_RS08665 +0.2 1.4 hypothetical protein compare
MMP_RS02745 +0.2 0.7 hypothetical protein compare
MMP_RS08205 +0.2 1.2 stage II sporulation protein M compare
MMP_RS01100 +0.2 0.4 ABC transporter ATP-binding protein compare
MMP_RS00540 +0.2 1.2 PLP-dependent aminotransferase family protein compare
MMP_RS03745 +0.2 1.2 phenylacetate--CoA ligase compare
MMP_RS08235 +0.2 1.1 hypothetical protein compare
MMP_RS01090 +0.2 1.1 ABC transporter substrate-binding protein compare
MMP_RS09065 +0.2 1.4 hypothetical protein compare
MMP_RS01660 +0.2 0.7 hypothetical protein compare
MMP_RS03230 +0.2 1.0 flavodoxin family protein compare
MMP_RS01655 +0.2 0.6 DsrE family protein compare
MMP_RS06305 +0.2 1.2 transporter substrate-binding domain-containing protein compare
MMP_RS06320 +0.2 1.0 hypothetical protein compare
MMP_RS07675 +0.2 1.4 S-layer protein compare
MMP_RS00795 +0.1 1.0 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS06225 +0.1 1.0 DNA double-strand break repair nuclease NurA compare
MMP_RS06990 +0.1 0.8 CatB-related O-acetyltransferase compare
MMP_RS03530 +0.1 1.1 tetratricopeptide repeat protein compare
MMP_RS07115 +0.1 0.9 MBL fold metallo-hydrolase compare
MMP_RS05365 +0.1 0.6 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS03845 +0.1 0.9 DNA adenine methylase compare
MMP_RS02170 +0.1 0.7 CBS domain-containing protein compare
MMP_RS07530 +0.1 1.0 4Fe-4S binding protein compare
MMP_RS00090 +0.1 0.6 CoA-binding protein compare
MMP_RS02425 +0.1 0.7 hypothetical protein compare
MMP_RS01605 +0.1 1.1 hypothetical protein compare
MMP_RS01320 +0.1 0.8 hypothetical protein compare
MMP_RS05175 +0.1 0.6 hypothetical protein compare
MMP_RS06190 +0.1 0.9 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms