Experiment set3IT074 for Methanococcus maripaludis JJ

Compare to:

H2 N-free with 2g/L casamino acids

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +1.3 4.1 hypothetical protein compare
MMJJ_RS03205 +1.2 5.4 metallophosphoesterase compare
MMJJ_RS04180 +0.8 2.1 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS09365 +0.8 1.9 hypothetical protein compare
MMJJ_RS08065 +0.8 0.8 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS06275 +0.7 2.5 hypothetical protein compare
MMJJ_RS09050 +0.7 2.4 hypothetical protein compare
MMJJ_RS07825 +0.6 3.1 YciI family protein compare
MMJJ_RS06495 +0.6 1.7 hypothetical protein compare
MMJJ_RS06440 +0.6 3.8 DUF4870 domain-containing protein compare
MMJJ_RS03350 +0.6 1.6 hypothetical protein compare
MMJJ_RS05685 +0.6 2.8 class III signal peptide-containing protein compare
MMJJ_RS05350 +0.6 2.7 DUF192 domain-containing protein compare
MMJJ_RS09405 +0.6 1.8 hypothetical protein compare
MMJJ_RS03370 +0.6 1.6 hypothetical protein compare
MMJJ_RS07365 +0.6 4.0 CatB-related O-acetyltransferase compare
MMJJ_RS06235 +0.5 4.5 IGHMBP2 family helicase compare
MMJJ_RS08455 +0.5 2.1 tetratricopeptide repeat protein compare
MMJJ_RS05135 +0.5 0.7 50S ribosomal protein L18Ae compare
MMJJ_RS08515 +0.5 1.6 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS06960 +0.5 4.5 CAP domain-containing protein compare
MMJJ_RS06105 +0.5 3.3 DUF99 family protein compare
MMJJ_RS06765 +0.5 3.9 hypothetical protein compare
MMJJ_RS02885 +0.5 2.7 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS08390 +0.5 1.1 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS07230 +0.5 3.0 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS06385 +0.5 2.4 hypothetical protein compare
MMJJ_RS05915 +0.5 1.2 multiprotein bridging factor aMBF1 compare
MMJJ_RS06580 +0.5 3.4 alanine dehydrogenase compare
MMJJ_RS06445 +0.5 3.8 hypothetical protein compare
MMJJ_RS07610 +0.5 2.6 DUF2119 domain-containing protein compare
MMJJ_RS06810 +0.5 3.4 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS09235 +0.5 2.4 helix-turn-helix transcriptional regulator compare
MMJJ_RS06135 +0.5 3.0 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS01085 +0.5 3.0 hypothetical protein compare
MMJJ_RS04480 +0.5 1.2 hypothetical protein compare
MMJJ_RS07790 +0.5 3.7 hypothetical protein compare
MMJJ_RS06430 +0.4 2.4 haloacid dehalogenase compare
MMJJ_RS07035 +0.4 0.4 glycosyl transferase compare
MMJJ_RS06585 +0.4 2.9 alanine racemase compare
MMJJ_RS06770 +0.4 3.5 hypothetical protein compare
MMJJ_RS07270 +0.4 2.6 ribonuclease HII compare
MMJJ_RS07200 +0.4 3.2 MFS transporter compare
MMJJ_RS06130 +0.4 1.9 hypothetical protein compare
MMJJ_RS01355 +0.4 0.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS05035 +0.4 2.3 4Fe-4S binding protein compare
MMJJ_RS06205 +0.4 2.7 EamA family transporter compare
MMJJ_RS06680 +0.4 1.9 DUF366 family protein compare
MMJJ_RS04525 +0.4 1.3 hypothetical protein compare
MMJJ_RS06555 +0.4 2.8 ATP-binding cassette domain-containing protein compare
MMJJ_RS05510 +0.4 2.5 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS07220 +0.4 3.0 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS07920 +0.4 2.3 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS06550 +0.4 2.6 ABC transporter permease compare
MMJJ_RS06295 +0.4 2.3 DUF2096 family protein compare
MMJJ_RS06470 +0.4 2.4 tripartite tricarboxylate transporter permease compare
MMJJ_RS06515 +0.4 2.7 ribonuclease III compare
MMJJ_RS06120 +0.4 2.3 DUF4013 domain-containing protein compare
MMJJ_RS05980 +0.4 2.1 DUF5400 domain-containing protein compare
MMJJ_RS07795 +0.4 1.8 cupin domain-containing protein compare
MMJJ_RS09325 +0.4 2.2 hypothetical protein compare
MMJJ_RS01010 +0.4 3.6 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS06745 +0.4 2.3 energy-coupling factor ABC transporter permease compare
MMJJ_RS06640 +0.4 2.2 YfcE family phosphodiesterase compare
MMJJ_RS04105 +0.4 2.8 prepilin peptidase compare
MMJJ_RS05300 +0.4 3.2 potassium channel protein compare
MMJJ_RS09265 +0.4 1.2 hypothetical protein compare
MMJJ_RS01665 +0.4 2.0 archease compare
MMJJ_RS07480 +0.4 3.0 FAD-dependent oxidoreductase compare
MMJJ_RS01650 +0.4 3.0 acetolactate synthase large subunit compare
MMJJ_RS07205 +0.4 1.4 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS07915 +0.4 2.1 CBS domain-containing protein compare
MMJJ_RS05890 +0.4 2.7 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS01210 +0.4 0.9 hypothetical protein compare
MMJJ_RS02915 +0.4 2.0 hypothetical protein compare
MMJJ_RS06115 +0.4 2.3 pyruvate kinase compare
MMJJ_RS05730 +0.4 2.3 TIM barrel protein compare
MMJJ_RS07210 +0.4 2.6 AmmeMemoRadiSam system protein B compare
MMJJ_RS07235 +0.4 2.7 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS03805 +0.4 0.7 hypothetical protein compare
MMJJ_RS07225 +0.4 2.0 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS04850 +0.3 1.9 energy-coupling factor transporter transmembrane protein EcfT compare
MMJJ_RS06540 +0.3 1.4 DUF2120 domain-containing protein compare
MMJJ_RS04245 +0.3 2.1 flavoprotein compare
MMJJ_RS05605 +0.3 1.6 hypothetical protein compare
MMJJ_RS08370 +0.3 1.2 hypothetical protein compare
MMJJ_RS07420 +0.3 1.8 protease complex subunit PrcB family protein compare
MMJJ_RS06080 +0.3 2.4 serine/threonine protein kinase compare
MMJJ_RS06075 +0.3 1.7 DNA-binding protein Alba compare
MMJJ_RS08165 +0.3 1.8 thermonuclease family protein compare
MMJJ_RS07255 +0.3 2.8 hypothetical protein compare
MMJJ_RS06710 +0.3 2.7 TldD/PmbA family protein compare
MMJJ_RS04235 +0.3 1.7 molybdate ABC transporter permease subunit compare
MMJJ_RS07445 +0.3 2.2 RlmF-related methyltransferase compare
MMJJ_RS06190 +0.3 2.4 7-cyano-7-deazaguanine synthase compare
MMJJ_RS00140 +0.3 1.4 hypothetical protein compare
MMJJ_RS04215 +0.3 2.4 DMT family transporter compare
MMJJ_RS07260 +0.3 1.7 PspC domain-containing protein compare
MMJJ_RS01635 +0.3 2.8 DUF4041 domain-containing protein compare
MMJJ_RS05895 +0.3 2.5 ABC transporter permease compare
MMJJ_RS01675 +0.3 2.5 malate dehydrogenase compare
MMJJ_RS05505 +0.3 2.9 hypothetical protein compare
MMJJ_RS06450 +0.3 2.0 DUF3343 domain-containing protein compare
MMJJ_RS06475 +0.3 2.1 AAA family ATPase compare
MMJJ_RS07985 +0.3 1.5 hypothetical protein compare
MMJJ_RS07780 +0.3 1.7 DUF190 domain-containing protein compare
MMJJ_RS04055 +0.3 1.3 hypothetical protein compare
MMJJ_RS07385 +0.3 1.9 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS00525 +0.3 0.9 Dabb family protein compare
MMJJ_RS00410 +0.3 1.8 hypothetical protein compare
MMJJ_RS05495 +0.3 1.9 MinD/ParA family protein compare
MMJJ_RS08820 +0.3 1.2 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS07695 +0.3 2.4 glycoside hydrolase family 15 protein compare
MMJJ_RS05940 +0.3 2.0 HAD family hydrolase compare
MMJJ_RS09360 +0.3 1.9 hypothetical protein compare
MMJJ_RS04440 +0.3 1.7 hypothetical protein compare
MMJJ_RS07620 +0.3 1.9 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS07590 +0.3 2.1 flap endonuclease-1 compare
MMJJ_RS06085 +0.3 1.0 proteasome assembly chaperone family protein compare
MMJJ_RS04340 +0.3 1.3 hypothetical protein compare
MMJJ_RS01990 +0.3 1.0 universal stress protein compare
MMJJ_RS06720 +0.3 1.6 mechanosensitive ion channel family protein compare
MMJJ_RS02270 +0.3 1.0 HEPN domain-containing protein compare
MMJJ_RS06975 +0.3 0.9 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS02110 +0.3 1.3 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS09355 +0.3 1.3 hypothetical protein compare
MMJJ_RS06340 +0.3 0.4 coenzyme-B sulfoethylthiotransferase subunit alpha compare
MMJJ_RS07400 +0.3 1.1 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMJJ_RS04940 +0.3 1.5 XRE family transcriptional regulator compare
MMJJ_RS06800 +0.3 1.1 prefoldin subunit alpha compare
MMJJ_RS02860 +0.3 0.9 site-specific integrase compare
MMJJ_RS06685 +0.3 2.1 S-layer protein compare
MMJJ_RS06285 +0.2 1.4 YchF/TatD family DNA exonuclease compare
MMJJ_RS09330 +0.2 1.2 hypothetical protein compare
MMJJ_RS00540 +0.2 1.6 hypothetical protein compare
MMJJ_RS05700 +0.2 1.5 metallophosphoesterase compare
MMJJ_RS06790 +0.2 1.9 nucleotidyltransferase family protein compare
MMJJ_RS06465 +0.2 1.3 hypothetical protein compare
MMJJ_RS03770 +0.2 1.3 hypothetical protein compare
MMJJ_RS00605 +0.2 1.3 ABC transporter permease compare
MMJJ_RS04190 +0.2 1.7 hypothetical protein compare
MMJJ_RS08200 +0.2 1.8 surface protein, anchor region compare
MMJJ_RS06520 +0.2 1.6 TldD/PmbA family protein compare
MMJJ_RS01955 +0.2 1.7 hypothetical protein compare
MMJJ_RS06100 +0.2 1.5 rubrerythrin compare
MMJJ_RS05240 +0.2 2.0 type II secretion system F family protein compare
MMJJ_RS06460 +0.2 1.3 cytochrome c compare
MMJJ_RS03195 +0.2 0.7 hypothetical protein compare
MMJJ_RS03425 +0.2 1.1 DUF2080 family transposase-associated protein compare
MMJJ_RS01950 +0.2 1.3 hypothetical protein compare
MMJJ_RS09295 +0.2 0.2 hypothetical protein compare
MMJJ_RS02010 +0.2 1.4 MBL fold metallo-hydrolase compare
MMJJ_RS05100 +0.2 1.3 P-II family nitrogen regulator compare
MMJJ_RS09305 +0.2 1.2 hypothetical protein compare
MMJJ_RS01785 +0.2 0.3 50S ribosomal protein L14e compare
MMJJ_RS08295 +0.2 1.8 iron ABC transporter substrate-binding protein compare
MMJJ_RS09390 +0.2 0.5 hypothetical protein compare
MMJJ_RS00170 +0.2 1.2 thioredoxin family protein compare
MMJJ_RS00555 +0.2 1.3 hypothetical protein compare
MMJJ_RS03360 +0.2 0.3 hypothetical protein compare
MMJJ_RS08075 +0.2 1.7 ATP-dependent DNA helicase compare
MMJJ_RS09210 +0.2 1.2 lysine exporter LysO family protein compare
MMJJ_RS09335 +0.2 1.0 hypothetical protein compare
MMJJ_RS05150 +0.2 1.5 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS08300 +0.2 1.4 hypothetical protein compare
MMJJ_RS05875 +0.2 1.9 hypothetical protein compare
MMJJ_RS06045 +0.2 1.2 hypothetical protein compare
MMJJ_RS08030 +0.2 1.1 hypothetical protein compare
MMJJ_RS06055 +0.2 1.5 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS06160 +0.2 1.4 stage II sporulation protein M compare
MMJJ_RS08380 +0.2 0.7 hypothetical protein compare
MMJJ_RS03520 +0.2 1.4 hypothetical protein compare
MMJJ_RS04220 +0.2 1.2 helix-turn-helix transcriptional regulator compare
MMJJ_RS01440 +0.2 1.3 NCS2 family permease compare
MMJJ_RS01970 +0.2 0.8 hypothetical protein compare
MMJJ_RS05580 +0.2 1.0 methanogenesis marker 9 domain-containing protein compare
MMJJ_RS08690 +0.2 1.3 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS08745 +0.2 1.5 glycosyltransferase family 9 protein compare
MMJJ_RS09010 +0.2 1.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS08215 +0.2 1.2 radical SAM protein compare
MMJJ_RS08410 +0.2 0.4 CBS domain-containing protein compare
MMJJ_RS07830 +0.2 1.2 DUF1786 domain-containing protein compare
MMJJ_RS05205 +0.2 1.3 DUF2118 domain-containing protein compare
MMJJ_RS05880 +0.2 1.8 hypothetical protein compare
MMJJ_RS04275 +0.2 1.1 ABC transporter ATP-binding protein compare
MMJJ_RS03515 +0.2 1.0 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS07595 +0.2 0.9 hypothetical protein compare
MMJJ_RS08265 +0.2 1.2 iron ABC transporter permease compare
MMJJ_RS06455 +0.2 1.2 YeeE/YedE family protein compare
MMJJ_RS04830 +0.2 1.2 zinc dependent phospholipase C family protein compare
MMJJ_RS08070 +0.2 1.3 alpha-glucan family phosphorylase compare
MMJJ_RS08675 +0.2 1.0 phosphate ABC transporter ATP-binding protein PstB compare
MMJJ_RS08835 +0.2 1.4 signal peptide peptidase SppA compare
MMJJ_RS02665 +0.2 0.5 methyl-accepting chemotaxis protein compare
MMJJ_RS07650 +0.2 1.5 formate/nitrite transporter family protein compare
MMJJ_RS05985 +0.2 1.1 ABC transporter substrate-binding protein compare
MMJJ_RS02225 +0.2 1.4 hypothetical protein compare
MMJJ_RS02365 +0.2 1.0 DUF2540 domain-containing protein compare
MMJJ_RS05500 +0.2 1.6 hypothetical protein compare
MMJJ_RS07815 +0.2 1.3 2-oxoacid:acceptor oxidoreductase family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nitrogen source experiments

For nitrogen source casamino acids across organisms