Experiment set3IT074 for Sphingomonas koreensis DSMZ 15582

Compare to:

D-Fructose carbon source

200 most detrimental genes:

  gene name fitness t score description  
Ga0059261_2019 +2.0 7.8 Uncharacterized protein conserved in bacteria compare
Ga0059261_3490 +1.9 12.9 Response regulator receiver domain/Sigma-70, region 4 compare
Ga0059261_2020 +1.9 16.8 Glycosyltransferase compare
Ga0059261_2746 +1.9 9.5 Predicted sugar nucleotidyltransferases compare
Ga0059261_3783 +1.8 11.5 hypothetical protein compare
Ga0059261_0131 +1.6 9.4 hypothetical protein compare
Ga0059261_2018 +1.6 11.6 hypothetical protein compare
Ga0059261_0657 +1.4 3.7 Uncharacterized protein conserved in bacteria compare
Ga0059261_3652 +1.4 11.0 phosphate transport system regulatory protein PhoU compare
Ga0059261_3579 +1.3 6.2 hypothetical protein compare
Ga0059261_0208 +1.3 7.4 Response regulator receiver domain compare
Ga0059261_3810 +1.3 7.5 Transcriptional regulators compare
Ga0059261_4022 +1.2 9.1 Signal transduction histidine kinase compare
Ga0059261_2744 +1.2 9.3 CDP-alcohol phosphatidyltransferase compare
Ga0059261_3784 +1.2 9.1 DNA mismatch repair protein MutS compare
Ga0059261_2017 +1.1 8.5 Glycosyltransferase compare
Ga0059261_2745 +1.1 9.3 Myo-inositol-1-phosphate synthase compare
Ga0059261_1578 +1.1 8.3 Rhodanese-like domain compare
Ga0059261_0209 +1.1 9.8 His Kinase A (phospho-acceptor) domain/Response regulator receiver domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase compare
Ga0059261_1846 +1.1 8.7 Xaa-Pro aminopeptidase compare
Ga0059261_3492 +1.0 6.8 RNA polymerase sigma factor, sigma-70 family compare
Ga0059261_0057 +1.0 9.1 Glycosyltransferase compare
Ga0059261_0225 +1.0 8.7 polyphosphate kinase 1 compare
Ga0059261_2504 +1.0 7.5 ribosome silencing factor RsfS/YbeB/iojap compare
Ga0059261_1050 +1.0 2.9 hypothetical protein compare
Ga0059261_2471 +0.9 1.3 hypothetical protein compare
Ga0059261_3507 +0.9 7.8 His Kinase A (phospho-acceptor) domain/Response regulator receiver domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase/CHASE3 domain compare
Ga0059261_0950 +0.9 3.5 Uncharacterized protein conserved in bacteria (DUF2336) compare
Ga0059261_0917 +0.9 6.6 Predicted P-loop-containing kinase compare
Ga0059261_1339 +0.8 2.5 hypothetical protein compare
Ga0059261_1303 +0.8 4.2 hypothetical protein compare
Ga0059261_3208 +0.8 3.1 hypothetical protein compare
Ga0059261_1420 +0.8 6.4 Protein of unknown function (DUF2490) compare
Ga0059261_4020 +0.8 6.0 hypothetical protein compare
Ga0059261_0045 +0.8 3.3 hypothetical protein compare
Ga0059261_2285 +0.8 2.0 Fe2+ transport system protein A compare
Ga0059261_4021 +0.8 7.1 TonB dependent receptor/TonB-dependent Receptor Plug Domain compare
Ga0059261_2415 +0.7 6.2 Phytoene/squalene synthetase compare
Ga0059261_4189 +0.7 4.2 hypothetical protein compare
Ga0059261_3698 +0.7 6.2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Ga0059261_0266 +0.7 1.8 hypothetical protein compare
Ga0059261_1924 +0.7 6.5 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes compare
Ga0059261_3965 +0.7 3.8 formimidoylglutamate deiminase (EC 3.5.3.13) compare
Ga0059261_3926 +0.7 6.1 L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) compare
Ga0059261_2187 +0.7 5.5 Cell Wall Hydrolase compare
Ga0059261_0039 +0.7 3.9 His Kinase A (phospho-acceptor) domain compare
Ga0059261_2227 +0.7 5.9 aminodeoxychorismate synthase, component I, bacterial clade compare
Ga0059261_1414 +0.6 3.8 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF compare
Ga0059261_2698 +0.6 4.8 N-acetylmuramoyl-L-alanine amidase compare
Ga0059261_2774 +0.6 2.2 Transcription elongation factor compare
Ga0059261_3094 +0.6 4.2 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase/FKBP-type peptidyl-prolyl cis-trans isomerase compare
Ga0059261_1183 +0.6 2.6 Protein of unknown function (DUF2958) compare
Ga0059261_1169 +0.6 2.8 hypothetical protein compare
Ga0059261_0879 +0.6 4.0 ribosomal RNA small subunit methyltransferase A compare
Ga0059261_1419 +0.6 3.5 fructose-6-phosphate aldolase, TalC/MipB family compare
Ga0059261_4185 +0.6 1.7 hypothetical protein compare
Ga0059261_0951 +0.6 3.6 hypothetical protein compare
Ga0059261_1608 +0.6 4.0 Phosphate starvation-inducible protein PhoH, predicted ATPase compare
Ga0059261_0525 +0.6 2.6 Transcriptional regulator compare
Ga0059261_2768 +0.6 1.7 hypothetical protein compare
Ga0059261_3287 +0.6 4.7 Topoisomerase IB compare
Ga0059261_1380 +0.6 4.8 Membrane protease subunits, stomatin/prohibitin homologs compare
Ga0059261_1505 +0.6 3.4 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) compare
Ga0059261_2502 +0.6 2.8 Membrane-bound metallopeptidase compare
Ga0059261_4199 +0.6 4.8 asparagine synthase (glutamine-hydrolyzing) compare
Ga0059261_1912 +0.6 2.7 Nitroreductase compare
Ga0059261_0982 +0.6 4.3 acetyl-CoA acetyltransferases compare
Ga0059261_1381 +0.5 2.4 Membrane protease subunits, stomatin/prohibitin homologs compare
Ga0059261_0035 +0.5 1.8 Uncharacterized protein conserved in bacteria compare
Ga0059261_1487 +0.5 3.8 GMP synthase - Glutamine amidotransferase domain compare
Ga0059261_4184 +0.5 3.1 exosortase A system-associated hydrolase 1 compare
Ga0059261_4197 +0.5 4.1 sugar transferase, PEP-CTERM/EpsH1 system associated compare
Ga0059261_1409 +0.5 3.7 hypothetical protein compare
Ga0059261_1092 +0.5 1.2 flagellar motor switch protein FliN compare
Ga0059261_1312 +0.5 2.6 amino acid/peptide transporter (Peptide:H+ symporter), bacterial compare
Ga0059261_1368 +0.5 0.9 hypothetical protein compare
Ga0059261_0743 +0.5 3.1 Kef-type K+ transport systems, membrane components compare
Ga0059261_0201 +0.5 3.9 Na+/H+-dicarboxylate symporters compare
Ga0059261_2512 +0.5 3.6 Uncharacterized protein conserved in bacteria compare
Ga0059261_3800 +0.5 2.0 Cold shock proteins compare
Ga0059261_0896 +0.5 3.3 Citrate lyase beta subunit compare
Ga0059261_0993 +0.5 1.0 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Ga0059261_2987 +0.5 1.4 hypothetical protein compare
Ga0059261_3602 +0.5 2.3 Glutaredoxin, GrxC family compare
Ga0059261_1458 +0.5 4.0 Cystathionine beta-lyases/cystathionine gamma-synthases compare
Ga0059261_3161 +0.5 2.4 tol-pal system-associated acyl-CoA thioesterase compare
Ga0059261_4001 +0.5 2.4 NTP pyrophosphohydrolases including oxidative damage repair enzymes compare
Ga0059261_2229 +0.5 2.0 Predicted transcriptional regulators compare
Ga0059261_1652 +0.4 1.0 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily compare
Ga0059261_0332 +0.4 3.7 Esterase/lipase compare
Ga0059261_3885 +0.4 1.0 K+-transporting ATPase, C subunit compare
Ga0059261_3365 +0.4 2.3 hypothetical protein compare
Ga0059261_2089 +0.4 2.4 flagellar basal-body rod protein FlgB compare
Ga0059261_2448 +0.4 1.4 DNA protecting protein DprA compare
Ga0059261_3759 +0.4 1.3 hypothetical protein compare
Ga0059261_3657 +0.4 2.8 His Kinase A (phospho-acceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase compare
Ga0059261_1560 +0.4 1.5 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Ga0059261_3801 +0.4 2.3 Phosphate/sulphate permeases compare
Ga0059261_3802 +0.4 3.2 Phosphate transport regulator (distant homolog of PhoU) compare
Ga0059261_1601 +0.4 1.5 protein-(glutamine-N5) methyltransferase, release factor-specific compare
Ga0059261_3581 +0.4 1.9 Alpha/beta hydrolase family compare
Ga0059261_3364 +0.4 3.6 PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family compare
Ga0059261_1315 +0.4 2.2 Alpha/beta hydrolase family compare
Ga0059261_4190 +0.4 2.8 Periplasmic protein involved in polysaccharide export compare
Ga0059261_1939 +0.4 1.1 putative phosphoesterase compare
Ga0059261_2271 +0.4 2.9 branched-chain alpha-keto acid dehydrogenase E2 component (EC 2.3.1.168) compare
Ga0059261_2091 +0.4 2.4 Flagellar hook capping protein compare
Ga0059261_4172 +0.4 2.7 hypothetical protein compare
Ga0059261_1265 +0.4 1.3 hypothetical protein compare
Ga0059261_3859 +0.4 1.4 MgtC family compare
Ga0059261_3536 +0.4 1.8 hypothetical protein compare
Ga0059261_0285 +0.4 2.4 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] compare
Ga0059261_4191 +0.4 2.6 polysaccharide chain length determinant protein, PEP-CTERM locus subfamily compare
Ga0059261_3494 +0.4 3.2 Glutamine synthetase adenylyltransferase compare
Ga0059261_3227 +0.4 1.2 GTP-binding protein YchF compare
Ga0059261_4019 +0.4 3.4 Tetratricopeptide repeat/Sulfotransferase family compare
Ga0059261_3297 +0.4 2.5 Uncharacterized protein conserved in bacteria compare
Ga0059261_1815 +0.4 3.0 hypothetical protein compare
Ga0059261_3862 +0.4 1.7 Multidrug resistance efflux pump compare
Ga0059261_2286 +0.4 2.3 Fe2+ transport system protein B compare
Ga0059261_2743 +0.4 1.0 hypothetical protein compare
Ga0059261_0781 +0.4 0.9 hypothetical protein compare
Ga0059261_0439 +0.4 1.6 hypothetical protein compare
Ga0059261_3638 +0.4 1.4 Predicted integral membrane protein (DUF2282) compare
Ga0059261_3188 +0.4 2.9 Acetyltransferase (GNAT) domain compare
Ga0059261_3613 +0.4 2.6 Dihydroneopterin aldolase compare
Ga0059261_3362 +0.4 3.3 Lipid A core - O-antigen ligase and related enzymes compare
Ga0059261_0592 +0.4 1.7 hypothetical protein compare
Ga0059261_3842 +0.4 3.3 PAS domain S-box compare
Ga0059261_4002 +0.4 2.5 Esterase/lipase compare
Ga0059261_2025 +0.4 3.1 Predicted aminopeptidases compare
Ga0059261_4198 +0.3 2.8 exosortase A compare
Ga0059261_2715 +0.3 1.7 hypothetical protein compare
Ga0059261_1914 +0.3 1.2 Acetyltransferases compare
Ga0059261_3266 +0.3 3.1 ribonuclease R compare
Ga0059261_2062 +0.3 2.2 flagellar biosynthetic protein FliP compare
Ga0059261_0848 +0.3 2.4 transcriptional regulator, TetR family compare
Ga0059261_1768 +0.3 1.1 Sigma-70 region 2 compare
Ga0059261_3833 +0.3 0.5 hypothetical protein compare
Ga0059261_1972 +0.3 2.2 Domain of unknown function (DUF3814) compare
Ga0059261_1595 +0.3 3.0 Membrane protein involved in the export of O-antigen and teichoic acid compare
Ga0059261_2244 +0.3 2.7 DNA polymerase I (EC 2.7.7.7) compare
Ga0059261_4193 +0.3 3.0 hypothetical protein compare
Ga0059261_2523 +0.3 2.5 Uncharacterized conserved protein compare
Ga0059261_1527 +0.3 0.8 hypothetical protein compare
Ga0059261_2241 +0.3 2.2 Uncharacterized protein conserved in bacteria compare
Ga0059261_1261 +0.3 0.8 hypothetical protein compare
Ga0059261_3982 +0.3 2.9 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) compare
Ga0059261_1016 +0.3 1.1 Cupin domain compare
Ga0059261_1462 +0.3 2.9 Transcriptional regulators compare
Ga0059261_2462 +0.3 1.8 Predicted transcriptional regulators compare
Ga0059261_3658 +0.3 2.7 hypothetical protein compare
Ga0059261_0451 +0.3 1.4 hypothetical protein compare
Ga0059261_2648 +0.3 1.8 Transcriptional regulators compare
Ga0059261_3612 +0.3 2.1 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Ga0059261_3356 +0.3 0.7 hypothetical protein compare
Ga0059261_4202 +0.3 2.5 Putative bacterial sensory transduction regulator compare
Ga0059261_0040 +0.3 2.8 hypothetical protein compare
Ga0059261_1757 +0.3 1.8 Protein of unknown function (DUF4007) compare
Ga0059261_3881 +0.3 2.4 Osmosensitive K+ channel histidine kinase compare
Ga0059261_4013 +0.3 0.6 hypothetical protein compare
Ga0059261_2682 +0.3 2.1 Response regulator receiver domain compare
Ga0059261_1756 +0.3 1.2 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes compare
Ga0059261_2875 +0.3 2.0 Transcriptional regulators compare
Ga0059261_2074 +0.3 2.2 Sigma-54 interaction domain/Bacterial regulatory protein, Fis family compare
Ga0059261_4195 +0.3 2.4 polysaccharide deacetylase family protein, PEP-CTERM locus subfamily compare
Ga0059261_0220 +0.3 2.1 L-serine dehydratase, iron-sulfur-dependent, single chain form compare
Ga0059261_1214 +0.3 0.8 hypothetical protein compare
Ga0059261_2413 +0.3 0.8 hypothetical protein compare
Ga0059261_0282 +0.3 2.4 ribosomal protein S12 methylthiotransferase RimO compare
Ga0059261_2082 +0.3 2.4 flagellar biosynthesis protein FlhA compare
Ga0059261_1741 +0.3 1.5 Conjugal transfer protein TraD compare
Ga0059261_1574 +0.3 1.5 Superfamily II DNA and RNA helicases compare
Ga0059261_3925 +0.3 1.6 Transcriptional regulators compare
Ga0059261_3216 +0.3 0.9 Acetyltransferases compare
Ga0059261_3962 +0.3 2.3 N-formylglutamate deformylase (EC 3.5.1.68) (from data) compare
Ga0059261_2071 +0.3 1.5 flagellar motor switch protein FliG compare
Ga0059261_0199 +0.3 0.7 hypothetical protein compare
Ga0059261_4192 +0.3 1.3 ATPases involved in chromosome partitioning compare
Ga0059261_0197 +0.3 0.6 hypothetical protein compare
Ga0059261_0305 +0.3 1.0 bacterioferritin compare
Ga0059261_3936 +0.3 2.3 hypothetical protein compare
Ga0059261_2273 +0.3 2.5 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit compare
Ga0059261_0060 +0.3 1.0 Uncharacterized conserved protein compare
Ga0059261_4196 +0.3 2.1 FemAB-related protein, PEP-CTERM system-associated compare
Ga0059261_3226 +0.3 2.1 Uncharacterized protein conserved in bacteria compare
Ga0059261_0770 +0.3 0.9 hypothetical protein compare
Ga0059261_0059 +0.3 0.7 Stress-induced morphogen (activity unknown) compare
Ga0059261_2118 +0.3 1.9 flagellar motor stator protein MotA compare
Ga0059261_0675 +0.3 1.3 hypothetical protein compare
Ga0059261_1855 +0.3 2.6 Outer membrane cobalamin receptor protein compare
Ga0059261_2730 +0.3 0.6 Sortase and related acyltransferases compare
Ga0059261_0691 +0.3 1.8 hypothetical protein compare
Ga0059261_1039 +0.3 2.0 hypothetical protein compare
Ga0059261_0875 +0.3 0.6 Leucyl aminopeptidase compare
Ga0059261_3661 +0.3 2.3 Uncharacterised nucleotidyltransferase compare
Ga0059261_0802 +0.3 0.9 protein-export chaperone SecB compare
Ga0059261_2331 +0.3 1.7 hypothetical protein compare
Ga0059261_1032 +0.3 1.4 protein CrcB compare
Ga0059261_3403 +0.3 2.1 Uncharacterized protein conserved in bacteria compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source D-Fructose in Sphingomonas koreensis DSMZ 15582

For carbon source D-Fructose across organisms