Experiment set3IT072 for Azospirillum brasilense Sp245

Compare to:

L-Isoleucine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
AZOBR_RS20000 +2.6 2.4 DNA repair protein RecO compare
AZOBR_RS10660 +2.6 4.9 pseudouridine synthase compare
AZOBR_RS08855 +2.5 15.2 FAD-dependent oxidoreductase compare
AZOBR_RS08280 +2.4 7.7 regulator compare
AZOBR_RS17315 +2.3 2.1 tRNA-Val compare
AZOBR_RS20235 +2.3 10.3 transcriptional regulator compare
AZOBR_RS31715 +2.2 2.6 hypothetical protein compare
AZOBR_RS25765 +2.2 8.7 hypothetical protein compare
AZOBR_RS05830 +2.2 3.8 Rrf2 family transcriptional regulator compare
AZOBR_RS00690 +2.1 2.2 ATP-binding protein compare
AZOBR_RS25755 +2.1 8.8 histidine kinase compare
AZOBR_RS10290 +2.1 7.1 transcriptional regulator compare
AZOBR_RS26735 +2.0 1.4 methionine ABC transporter ATP-binding protein compare
AZOBR_RS06940 +2.0 3.2 glycine cleavage system protein T compare
AZOBR_RS19365 +2.0 12.1 glycosyltransferase family 2 compare
AZOBR_RS09890 +2.0 5.5 hypothetical protein compare
AZOBR_RS33035 +2.0 2.5 transposase compare
AZOBR_RS02205 +1.9 2.8 ribonuclease PH compare
AZOBR_RS06150 +1.9 2.1 small protein containing a coiled-coil domain containing protein compare
AZOBR_RS01040 +1.9 1.3 manganese transporter compare
AZOBR_RS03215 +1.9 1.6 hypothetical protein compare
AZOBR_RS19375 +1.9 14.6 UDP-phosphate galactose phosphotransferase compare
AZOBR_RS09215 +1.9 1.0 cell division protein FtsH compare
AZOBR_RS22025 +1.9 3.0 histidine kinase compare
AZOBR_RS26325 +1.8 2.3 ABC transporter permease compare
AZOBR_RS19370 +1.8 11.4 polymerase compare
AZOBR_RS19380 +1.8 9.3 membrane protein compare
AZOBR_RS10235 +1.8 1.1 cobalamin biosynthesis protein CobD compare
AZOBR_RS18400 +1.8 6.2 glutamate methylesterase compare
AZOBR_RS19870 +1.7 1.1 hypothetical protein compare
AZOBR_RS16875 +1.7 1.8 hypothetical protein compare
AZOBR_RS31600 +1.7 2.1 RNA polymerase compare
AZOBR_RS09520 +1.7 4.6 hypothetical protein compare
AZOBR_RS29875 +1.7 1.8 cell division protein compare
AZOBR_RS15055 +1.7 1.8 muraminidase compare
AZOBR_RS00975 +1.7 2.0 tRNA synthetase RNA-binding protein compare
AZOBR_RS11635 +1.7 10.3 hypothetical protein compare
AZOBR_RS23625 +1.6 9.9 hypothetical protein compare
AZOBR_RS30375 +1.6 1.7 hypothetical protein compare
AZOBR_RS30175 +1.6 1.2 TetR family transcriptional regulator compare
AZOBR_RS23555 +1.6 2.2 beta-lactamase compare
AZOBR_RS10130 +1.6 1.3 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
AZOBR_RS23130 +1.6 1.9 cytochrome C compare
AZOBR_RS06470 +1.6 7.0 hypothetical protein compare
AZOBR_RS21540 +1.6 6.0 (2Fe-2S)-binding protein compare
AZOBR_RS19405 +1.6 10.5 glycosyltransferase compare
AZOBR_RS26080 +1.6 1.5 transcriptional regulator compare
AZOBR_RS19455 +1.6 2.4 hypothetical protein compare
AZOBR_RS27825 +1.6 1.7 hypothetical protein compare
AZOBR_RS23135 +1.5 1.0 cytochrome C compare
AZOBR_RS12455 +1.5 1.5 transcriptional regulator compare
AZOBR_RS26780 +1.5 6.6 hypothetical protein compare
AZOBR_RS09515 +1.5 7.8 heme ABC transporter ATP-binding protein compare
AZOBR_RS21530 +1.5 3.6 hypothetical protein compare
AZOBR_RS23635 +1.5 9.3 conserved membrane protein of unknown function compare
AZOBR_RS19360 +1.5 4.1 glycosyltransferase family 1 compare
AZOBR_RS02295 +1.5 1.2 aspartate aminotransferase compare
AZOBR_RS02300 +1.5 1.0 cell division protein FtsK compare
AZOBR_RS33710 +1.5 4.7 putative aminotransferase compare
AZOBR_RS03200 +1.5 2.8 BolA family transcriptional regulator compare
AZOBR_RS22260 +1.5 1.9 cobalamin compare
AZOBR_RS19400 +1.5 4.7 exopolysaccharide biosynthesis protein compare
AZOBR_RS20090 +1.5 1.8 chemotaxis protein CheY compare
AZOBR_RS15420 +1.5 1.5 hypothetical protein compare
AZOBR_RS02850 +1.4 0.7 hypothetical protein compare
AZOBR_RS27425 +1.4 1.1 hypothetical protein compare
AZOBR_RS21155 +1.4 4.5 hypothetical protein compare
AZOBR_RS28875 +1.4 1.0 hypothetical protein compare
AZOBR_RS15345 +1.4 1.2 hypothetical protein compare
AZOBR_RS15400 +1.4 2.6 squalene synthase compare
AZOBR_RS18340 +1.4 2.0 D-alanyl-D-alanine carboxypeptidase compare
AZOBR_RS23630 +1.4 4.3 hypothetical protein compare
AZOBR_RS02155 +1.4 4.6 16S rRNA methyltransferase compare
AZOBR_RS11920 +1.4 2.2 hypothetical protein compare
AZOBR_RS17440 +1.4 2.5 carnitine dehydratase compare
AZOBR_RS00585 +1.4 3.1 mannose-1-phosphate guanylyltransferase compare
AZOBR_RS23115 +1.4 1.3 ferredoxin compare
AZOBR_RS25975 +1.4 4.9 chemotaxis protein CheR compare
AZOBR_RS12450 +1.4 2.7 transcriptional regulator compare
AZOBR_RS10160 +1.4 1.6 nitrate ABC transporter substrate-binding protein compare
AZOBR_RS00370 +1.4 2.1 hypothetical protein compare
AZOBR_RS07740 +1.4 1.5 histidine kinase compare
AZOBR_RS04300 +1.4 1.1 hypothetical protein compare
AZOBR_RS07930 +1.3 1.3 spermidine/putrescine ABC transporter substrate-binding protein compare
AZOBR_RS08945 +1.3 1.2 molybdenum cofactor biosynthesis protein MoaD compare
AZOBR_RS33590 +1.3 3.7 protein of unknown function TPR repeat domains compare
AZOBR_RS11680 +1.3 1.7 hypothetical protein compare
AZOBR_RS21965 +1.3 2.6 peptidase M48 Ste24p compare
AZOBR_RS23405 +1.3 1.6 hypothetical protein compare
AZOBR_RS10275 +1.3 8.5 hypothetical protein compare
AZOBR_RS16750 +1.3 2.2 TetR family transcriptional regulator compare
AZOBR_RS12185 +1.3 1.8 methyltransferase compare
AZOBR_RS32360 +1.3 1.4 hypothetical protein compare
AZOBR_RS28385 +1.3 2.2 membrane protein compare
AZOBR_RS23150 +1.3 4.1 chemotaxis protein CheY compare
AZOBR_RS21430 +1.3 4.3 metallophosphoesterase compare
AZOBR_RS06525 +1.3 0.9 membrane protein compare
AZOBR_RS21550 +1.3 3.7 acetyltransferase compare
AZOBR_RS19550 +1.3 1.2 tRNA-Phe compare
AZOBR_RS11630 +1.3 6.4 putative polysaccharide export protein compare
AZOBR_RS03695 +1.3 1.7 NAD synthetase compare
AZOBR_RS21575 +1.2 2.1 spore coat protein compare
AZOBR_RS15650 +1.2 1.1 regulator of disulfide-bond formation SirA family protein compare
AZOBR_RS06325 +1.2 2.1 hypothetical protein compare
AZOBR_RS20935 +1.2 1.9 hypothetical protein compare
AZOBR_RS30205 +1.2 1.2 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase compare
AZOBR_RS17670 +1.2 1.1 recombinase RecF compare
AZOBR_RS20340 +1.2 1.8 carbamoyltransferase compare
AZOBR_RS06640 +1.2 0.9 cytidine deaminase compare
AZOBR_RS24105 +1.2 1.7 enoyl-CoA hydratase compare
AZOBR_RS25300 +1.2 0.9 putative 2-dehydropantoate 2-reductase compare
AZOBR_RS14120 +1.2 0.6 hypothetical protein compare
AZOBR_RS15535 +1.2 0.9 heme biosynthesis protein HemY compare
AZOBR_RS20445 +1.2 1.2 glutathione S-transferase compare
AZOBR_RS32140 +1.2 1.8 flagellar basal body rod protein FlgG compare
AZOBR_RS01085 +1.2 3.9 hypothetical protein compare
AZOBR_RS23640 +1.2 6.6 membrane protein of unknown function compare
AZOBR_RS27630 +1.2 1.6 CoA-transferase compare
AZOBR_RS15730 +1.2 2.2 enoyl-CoA hydratase compare
AZOBR_RS28925 +1.2 1.0 hypothetical protein compare
AZOBR_RS02070 +1.2 2.8 pyrrolidone-carboxylate peptidase compare
AZOBR_RS01900 +1.2 0.8 membrane protein compare
AZOBR_RS01225 +1.2 0.5 exported protein of unknown function compare
AZOBR_RS08465 +1.2 2.6 MarR family transcriptional regulator compare
AZOBR_RS19580 +1.2 0.7 AsnC family transcriptional regulator compare
AZOBR_RS33705 +1.2 1.9 flagellin modification protein FlmA compare
AZOBR_RS21620 +1.2 3.2 hypothetical protein compare
AZOBR_RS03020 +1.1 1.5 hypothetical protein compare
AZOBR_RS20500 +1.1 2.1 transcriptional regulator compare
AZOBR_RS24695 +1.1 1.1 3-oxoacyl-ACP reductase compare
AZOBR_RS16430 +1.1 3.4 MarR family transcriptional regulator compare
AZOBR_RS14240 +1.1 3.2 chemotaxis protein CheW compare
AZOBR_RS16550 +1.1 2.5 ABC transporter permease compare
AZOBR_RS02525 +1.1 3.2 NAD(FAD)-utilizing dehydrogenase compare
AZOBR_RS21655 +1.1 1.1 N-acetylmuramoyl-L-alanine amidase compare
AZOBR_RS11785 +1.1 0.8 hypothetical protein compare
AZOBR_RS13515 +1.1 0.8 diguanylate phosphodiesterase compare
AZOBR_RS06095 +1.1 1.4 hypothetical protein compare
AZOBR_RS31435 +1.1 2.7 LysR family transcriptional regulator compare
AZOBR_RS06955 +1.1 3.0 sugar ABC transporter permease compare
AZOBR_RS21610 +1.1 0.9 flagellin compare
AZOBR_RS08795 +1.1 2.4 LuxR family transcriptional regulator compare
AZOBR_RS12760 +1.1 1.1 ABC transporter substrate-binding protein compare
AZOBR_RS26940 +1.1 0.8 hemolysin III compare
AZOBR_RS28735 +1.1 2.1 hypothetical protein compare
AZOBR_RS19265 +1.1 3.5 sulfate transporter subunit compare
AZOBR_RS03915 +1.1 3.0 trans-aconitate 2-methyltransferase compare
AZOBR_RS33765 +1.1 6.1 NAD-dependent dehydratase compare
AZOBR_RS33750 +1.0 1.5 hypothetical protein compare
AZOBR_RS33725 +1.0 1.1 phosphomannomutase compare
AZOBR_RS30680 +1.0 5.4 methyltransferase compare
AZOBR_RS02885 +1.0 1.8 ankyrin compare
AZOBR_RS08220 +1.0 4.4 hypothetical protein compare
AZOBR_RS24660 +1.0 2.4 membrane protein of unknown function compare
AZOBR_RS06485 +1.0 0.8 membrane protein compare
AZOBR_RS20015 +1.0 6.3 C4-dicarboxylate ABC transporter compare
AZOBR_RS08665 +1.0 3.2 amino acid ABC transporter permease compare
AZOBR_RS17480 +1.0 1.7 hypothetical protein compare
AZOBR_RS11925 +1.0 0.9 membrane protein compare
AZOBR_RS09170 +1.0 1.3 exported protein of unknown function compare
AZOBR_RS23065 +1.0 4.4 LacI family transcription regulator compare
AZOBR_RS08660 +1.0 3.3 ABC transporter permease compare
AZOBR_RS19855 +1.0 2.9 hypothetical protein compare
AZOBR_RS08515 +1.0 1.6 hypothetical protein compare
AZOBR_RS03405 +1.0 1.4 transcriptional regulator compare
AZOBR_RS23170 +1.0 2.9 cytochrome O ubiquinol oxidase compare
AZOBR_RS14605 +1.0 5.9 ABC transporter substrate-binding protein compare
AZOBR_RS14235 +1.0 0.9 chemotaxis protein CheA compare
AZOBR_RS19350 +1.0 3.1 polysaccharide deacetylase compare
AZOBR_RS16955 +1.0 1.3 hypothetical protein compare
AZOBR_RS30085 +1.0 3.2 DNA-binding protein compare
AZOBR_RS10230 +1.0 4.2 homospermidine synthase compare
AZOBR_RS14460 +1.0 1.7 HAD family hydrolase compare
AZOBR_RS07955 +1.0 0.9 tartronate semialdehyde reductase compare
AZOBR_RS19340 +1.0 6.8 long-chain fatty acid--CoA ligase compare
AZOBR_RS10560 +1.0 0.7 hypothetical protein compare
AZOBR_RS00490 +1.0 3.2 oxidoreductase compare
AZOBR_RS20470 +1.0 1.4 methionine biosynthesis protein compare
AZOBR_RS11025 +1.0 2.5 isocitrate dehydrogenase compare
AZOBR_RS10215 +1.0 0.8 acireductone dioxygenase compare
AZOBR_RS14105 +1.0 1.7 LOG family protein compare
AZOBR_RS31830 +1.0 1.5 hypothetical protein compare
AZOBR_RS08060 +1.0 1.1 urease subunit gamma compare
AZOBR_RS17950 +1.0 3.1 iron ABC transporter compare
AZOBR_RS07060 +1.0 0.6 hypothetical protein compare
AZOBR_RS26520 +1.0 0.9 alcohol dehydrogenase compare
AZOBR_RS14870 +1.0 1.6 cytochrome C transmembrane protein compare
AZOBR_RS24630 +1.0 1.2 hypothetical protein compare
AZOBR_RS21625 +1.0 3.2 hypothetical protein compare
AZOBR_RS22355 +1.0 2.8 acetyl-CoA synthetase compare
AZOBR_RS22960 +1.0 2.1 hypothetical protein compare
AZOBR_RS07725 +1.0 3.0 cupin compare
AZOBR_RS04220 +1.0 1.6 hypothetical protein compare
AZOBR_RS20035 +1.0 5.2 hypothetical protein compare
AZOBR_RS29885 +1.0 1.9 flagellar basal body protein FliL compare
AZOBR_RS15200 +0.9 2.5 hypothetical protein compare
AZOBR_RS33070 +0.9 1.0 transposase compare
AZOBR_RS25515 +0.9 1.5 hypothetical protein compare
AZOBR_RS01275 +0.9 1.5 hypothetical protein compare
AZOBR_RS21565 +0.9 3.4 hypothetical protein compare


Specific Phenotypes

For 8 genes in this experiment

For nitrogen source L-Isoleucine in Azospirillum brasilense Sp245

For nitrogen source L-Isoleucine across organisms