Experiment set3IT072 for Methanococcus maripaludis JJ

Compare to:

H2 N-free with 2g/L casamino acids

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS03205 +1.2 7.2 metallophosphoesterase compare
MMJJ_RS04180 +1.1 3.6 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS04415 +1.1 4.0 hypothetical protein compare
MMJJ_RS09365 +0.7 1.7 hypothetical protein compare
MMJJ_RS08065 +0.7 0.9 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS09050 +0.7 2.7 hypothetical protein compare
MMJJ_RS02860 +0.6 2.5 site-specific integrase compare
MMJJ_RS06440 +0.6 3.4 DUF4870 domain-containing protein compare
MMJJ_RS06430 +0.6 3.0 haloacid dehalogenase compare
MMJJ_RS06385 +0.6 2.3 hypothetical protein compare
MMJJ_RS02885 +0.5 2.6 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS09390 +0.5 1.4 hypothetical protein compare
MMJJ_RS06800 +0.5 2.3 prefoldin subunit alpha compare
MMJJ_RS01665 +0.5 2.8 archease compare
MMJJ_RS06275 +0.5 2.3 hypothetical protein compare
MMJJ_RS06765 +0.5 3.9 hypothetical protein compare
MMJJ_RS06130 +0.5 1.8 hypothetical protein compare
MMJJ_RS06585 +0.5 3.1 alanine racemase compare
MMJJ_RS06470 +0.5 3.2 tripartite tricarboxylate transporter permease compare
MMJJ_RS06080 +0.5 3.3 serine/threonine protein kinase compare
MMJJ_RS06105 +0.5 2.9 DUF99 family protein compare
MMJJ_RS02915 +0.5 2.2 hypothetical protein compare
MMJJ_RS07790 +0.5 3.6 hypothetical protein compare
MMJJ_RS06810 +0.5 3.6 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS07365 +0.5 3.0 CatB-related O-acetyltransferase compare
MMJJ_RS06710 +0.5 3.7 TldD/PmbA family protein compare
MMJJ_RS06100 +0.5 2.7 rubrerythrin compare
MMJJ_RS05350 +0.5 2.5 DUF192 domain-containing protein compare
MMJJ_RS06580 +0.5 3.0 alanine dehydrogenase compare
MMJJ_RS04055 +0.5 1.9 hypothetical protein compare
MMJJ_RS01250 +0.5 1.9 hypothetical protein compare
MMJJ_RS06235 +0.5 3.4 IGHMBP2 family helicase compare
MMJJ_RS06295 +0.5 2.8 DUF2096 family protein compare
MMJJ_RS07230 +0.4 2.4 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS06205 +0.4 3.4 EamA family transporter compare
MMJJ_RS06445 +0.4 3.6 hypothetical protein compare
MMJJ_RS03320 +0.4 1.9 hypothetical protein compare
MMJJ_RS07610 +0.4 2.5 DUF2119 domain-containing protein compare
MMJJ_RS05300 +0.4 3.8 potassium channel protein compare
MMJJ_RS06515 +0.4 3.0 ribonuclease III compare
MMJJ_RS05605 +0.4 2.1 hypothetical protein compare
MMJJ_RS01650 +0.4 3.6 acetolactate synthase large subunit compare
MMJJ_RS06135 +0.4 2.8 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS06115 +0.4 2.5 pyruvate kinase compare
MMJJ_RS07795 +0.4 2.1 cupin domain-containing protein compare
MMJJ_RS08025 +0.4 1.1 hypothetical protein compare
MMJJ_RS00525 +0.4 0.9 Dabb family protein compare
MMJJ_RS07025 +0.4 1.7 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS07220 +0.4 2.9 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS06770 +0.4 3.0 hypothetical protein compare
MMJJ_RS06450 +0.4 2.6 DUF3343 domain-containing protein compare
MMJJ_RS03360 +0.4 0.5 hypothetical protein compare
MMJJ_RS06555 +0.4 2.8 ATP-binding cassette domain-containing protein compare
MMJJ_RS06550 +0.4 2.9 ABC transporter permease compare
MMJJ_RS09380 +0.4 1.3 hypothetical protein compare
MMJJ_RS07420 +0.4 2.2 protease complex subunit PrcB family protein compare
MMJJ_RS07235 +0.4 2.8 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS06160 +0.4 2.7 stage II sporulation protein M compare
MMJJ_RS08390 +0.4 0.7 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS06960 +0.4 3.1 CAP domain-containing protein compare
MMJJ_RS05505 +0.4 3.3 hypothetical protein compare
MMJJ_RS01010 +0.4 3.3 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS01675 +0.4 2.8 malate dehydrogenase compare
MMJJ_RS05510 +0.4 2.4 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS00785 +0.3 0.9 hypothetical protein compare
MMJJ_RS06495 +0.3 1.1 hypothetical protein compare
MMJJ_RS04105 +0.3 2.7 prepilin peptidase compare
MMJJ_RS07765 +0.3 1.1 DMT family protein compare
MMJJ_RS06505 +0.3 0.9 prephenate dehydratase compare
MMJJ_RS05955 +0.3 2.4 radical SAM protein compare
MMJJ_RS09010 +0.3 2.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS02905 +0.3 1.4 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS08165 +0.3 2.1 thermonuclease family protein compare
MMJJ_RS00670 +0.3 2.0 nitrogen fixation compare
MMJJ_RS06055 +0.3 2.1 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS06120 +0.3 2.2 DUF4013 domain-containing protein compare
MMJJ_RS04850 +0.3 1.8 energy-coupling factor transporter transmembrane protein EcfT compare
MMJJ_RS05915 +0.3 0.9 multiprotein bridging factor aMBF1 compare
MMJJ_RS08515 +0.3 1.2 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS08300 +0.3 2.3 hypothetical protein compare
MMJJ_RS07825 +0.3 1.9 YciI family protein compare
MMJJ_RS06465 +0.3 1.7 hypothetical protein compare
MMJJ_RS02665 +0.3 1.0 methyl-accepting chemotaxis protein compare
MMJJ_RS07905 +0.3 1.9 DUF89 domain-containing protein compare
MMJJ_RS00885 +0.3 1.3 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS04945 +0.3 2.4 PLP-dependent aminotransferase family protein compare
MMJJ_RS09020 +0.3 1.3 hypothetical protein compare
MMJJ_RS05700 +0.3 1.9 metallophosphoesterase compare
MMJJ_RS02270 +0.3 1.1 HEPN domain-containing protein compare
MMJJ_RS07695 +0.3 2.5 glycoside hydrolase family 15 protein compare
MMJJ_RS01635 +0.3 2.6 DUF4041 domain-containing protein compare
MMJJ_RS07225 +0.3 1.6 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS06475 +0.3 1.9 AAA family ATPase compare
MMJJ_RS07270 +0.3 1.8 ribonuclease HII compare
MMJJ_RS06680 +0.3 1.4 DUF366 family protein compare
MMJJ_RS09405 +0.3 0.9 hypothetical protein compare
MMJJ_RS05150 +0.3 1.9 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS08690 +0.3 1.8 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS03350 +0.3 0.9 hypothetical protein compare
MMJJ_RS01085 +0.3 1.5 hypothetical protein compare
MMJJ_RS04220 +0.3 1.8 helix-turn-helix transcriptional regulator compare
MMJJ_RS04245 +0.3 1.5 flavoprotein compare
MMJJ_RS07830 +0.3 1.8 DUF1786 domain-containing protein compare
MMJJ_RS07215 +0.3 2.1 TIGR00341 family protein compare
MMJJ_RS06500 +0.3 1.7 class I SAM-dependent methyltransferase compare
MMJJ_RS06685 +0.3 2.3 S-layer protein compare
MMJJ_RS05685 +0.3 1.4 class III signal peptide-containing protein compare
MMJJ_RS05205 +0.3 1.9 DUF2118 domain-containing protein compare
MMJJ_RS07480 +0.3 2.0 FAD-dependent oxidoreductase compare
MMJJ_RS03690 +0.3 1.8 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS07255 +0.3 2.2 hypothetical protein compare
MMJJ_RS09325 +0.3 1.5 hypothetical protein compare
MMJJ_RS07620 +0.3 2.0 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS09235 +0.3 1.2 helix-turn-helix transcriptional regulator compare
MMJJ_RS01230 +0.3 1.5 EamA family transporter compare
MMJJ_RS05970 +0.3 0.6 MJ0307 family thioredoxin compare
MMJJ_RS05335 +0.3 1.3 heavy metal-binding domain-containing protein compare
MMJJ_RS01275 +0.3 0.8 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS07040 +0.3 0.3 preprotein translocase subunit SecY compare
MMJJ_RS05695 +0.3 1.0 class III signal peptide-containing protein compare
MMJJ_RS03135 +0.3 0.9 CBS domain-containing protein compare
MMJJ_RS07590 +0.3 1.7 flap endonuclease-1 compare
MMJJ_RS07445 +0.3 1.7 RlmF-related methyltransferase compare
MMJJ_RS09265 +0.3 0.8 hypothetical protein compare
MMJJ_RS07385 +0.2 1.8 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS02365 +0.2 1.2 DUF2540 domain-containing protein compare
MMJJ_RS07835 +0.2 1.4 UPF0489 family protein compare
MMJJ_RS06790 +0.2 2.0 nucleotidyltransferase family protein compare
MMJJ_RS06720 +0.2 1.5 mechanosensitive ion channel family protein compare
MMJJ_RS08365 +0.2 0.9 DsrE family protein compare
MMJJ_RS07400 +0.2 0.9 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMJJ_RS05090 +0.2 1.1 MGMT family protein compare
MMJJ_RS06045 +0.2 1.4 hypothetical protein compare
MMJJ_RS08215 +0.2 1.5 radical SAM protein compare
MMJJ_RS04550 +0.2 1.5 ATP-binding cassette domain-containing protein compare
MMJJ_RS07010 +0.2 1.1 preprotein translocase subunit Sec61beta compare
MMJJ_RS06560 +0.2 1.5 site-2 protease family protein compare
MMJJ_RS09015 +0.2 1.4 SPFH domain-containing protein compare
MMJJ_RS08380 +0.2 0.8 hypothetical protein compare
MMJJ_RS05975 +0.2 1.5 sulfurtransferase TusA family protein compare
MMJJ_RS06190 +0.2 1.6 7-cyano-7-deazaguanine synthase compare
MMJJ_RS04215 +0.2 1.7 DMT family transporter compare
MMJJ_RS07740 +0.2 1.2 DUF2334 domain-containing protein compare
MMJJ_RS07650 +0.2 1.7 formate/nitrite transporter family protein compare
MMJJ_RS05990 +0.2 1.2 phosphatase PAP2 family protein compare
MMJJ_RS04855 +0.2 1.5 ECF transporter S component compare
MMJJ_RS05240 +0.2 1.9 type II secretion system F family protein compare
MMJJ_RS05095 +0.2 1.8 ammonium transporter compare
MMJJ_RS05730 +0.2 1.4 TIM barrel protein compare
MMJJ_RS05100 +0.2 1.3 P-II family nitrogen regulator compare
MMJJ_RS05895 +0.2 1.7 ABC transporter permease compare
MMJJ_RS05890 +0.2 1.6 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS04230 +0.2 1.6 ABC transporter ATP-binding protein compare
MMJJ_RS06075 +0.2 1.0 DNA-binding protein Alba compare
MMJJ_RS04745 +0.2 1.0 cyclase family protein compare
MMJJ_RS06140 +0.2 1.4 RimK family alpha-L-glutamate ligase compare
MMJJ_RS07260 +0.2 1.2 PspC domain-containing protein compare
MMJJ_RS04285 +0.2 1.5 ABC transporter substrate-binding protein compare
MMJJ_RS03235 +0.2 0.9 hypothetical protein compare
MMJJ_RS01640 +0.2 1.6 zinc ribbon domain-containing protein compare
MMJJ_RS01110 +0.2 1.1 hypothetical protein compare
MMJJ_RS03520 +0.2 1.4 hypothetical protein compare
MMJJ_RS05965 +0.2 1.6 MFS transporter compare
MMJJ_RS05985 +0.2 1.3 ABC transporter substrate-binding protein compare
MMJJ_RS00115 +0.2 1.1 hypothetical protein compare
MMJJ_RS07595 +0.2 1.0 hypothetical protein compare
MMJJ_RS05235 +0.2 1.7 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS07200 +0.2 1.5 MFS transporter compare
MMJJ_RS05880 +0.2 1.8 hypothetical protein compare
MMJJ_RS04860 +0.2 1.6 hypothetical protein compare
MMJJ_RS08820 +0.2 0.8 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS04810 +0.2 1.0 nitroreductase family protein compare
MMJJ_RS09360 +0.2 1.3 hypothetical protein compare
MMJJ_RS07860 +0.2 1.0 hypothetical protein compare
MMJJ_RS07210 +0.2 1.5 AmmeMemoRadiSam system protein B compare
MMJJ_RS05500 +0.2 1.7 hypothetical protein compare
MMJJ_RS04175 +0.2 1.0 hypothetical protein compare
MMJJ_RS08410 +0.2 0.5 CBS domain-containing protein compare
MMJJ_RS08540 +0.2 1.6 archaeosortase family protein ArtE compare
MMJJ_RS02225 +0.2 1.2 hypothetical protein compare
MMJJ_RS05035 +0.2 1.0 4Fe-4S binding protein compare
MMJJ_RS09155 +0.2 1.5 RluA family pseudouridine synthase compare
MMJJ_RS07690 +0.2 1.2 glycosyltransferase family 4 protein compare
MMJJ_RS08450 +0.2 1.1 undecaprenyl-diphosphate phosphatase compare
MMJJ_RS08810 +0.2 0.2 DUF4040 domain-containing protein compare
MMJJ_RS08160 +0.2 1.1 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMJJ_RS03460 +0.2 1.1 hypothetical protein compare
MMJJ_RS08370 +0.2 0.8 hypothetical protein compare
MMJJ_RS08455 +0.2 0.8 tetratricopeptide repeat protein compare
MMJJ_RS08310 +0.2 1.2 ZIP family metal transporter compare
MMJJ_RS05085 +0.2 1.1 hypothetical protein compare
MMJJ_RS03475 +0.2 1.3 tyrosine-type recombinase/integrase compare
MMJJ_RS05600 +0.2 1.4 sodium:solute symporter family protein compare
MMJJ_RS01825 +0.2 0.8 DNA repair and recombination protein RadB compare
MMJJ_RS00820 +0.2 1.1 MtaA/CmuA family methyltransferase compare
MMJJ_RS03755 +0.2 0.8 hypothetical protein compare
MMJJ_RS09210 +0.2 1.1 lysine exporter LysO family protein compare
MMJJ_RS01840 +0.2 0.9 flavodoxin family protein compare
MMJJ_RS06460 +0.2 1.0 cytochrome c compare
MMJJ_RS00605 +0.2 0.9 ABC transporter permease compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nitrogen source experiments

For nitrogen source casamino acids across organisms