Experiment set3IT068 for Dyella japonica UNC79MFTsu3.2

Compare to:

LB with MreB Perturbing Compound A22 0.01 mg/ml

200 most important genes:

  gene name fitness t score description  
ABZR86_RS12005 -4.8 -3.3 ribose-5-phosphate isomerase RpiA compare
ABZR86_RS12885 -4.6 -3.2 magnesium-translocating P-type ATPase compare
ABZR86_RS20775 -3.3 -5.3 TetR/AcrR family transcriptional regulator compare
ABZR86_RS05550 -3.2 -5.3 lipopolysaccharide assembly protein LapB compare
ABZR86_RS09075 -3.2 -2.1 NrsF family protein compare
ABZR86_RS15460 -3.2 -3.8 type I glutamate--ammonia ligase compare
ABZR86_RS11485 -3.2 -5.2 hypothetical protein compare
ABZR86_RS07180 -2.8 -6.3 RNA polymerase sigma factor RpoE compare
ABZR86_RS14700 -2.7 -6.3 glucose-6-phosphate dehydrogenase compare
ABZR86_RS09840 -2.7 -1.8 Trm112 family protein compare
ABZR86_RS15640 -2.6 -2.5 orotate phosphoribosyltransferase compare
ABZR86_RS18775 -2.6 -2.1 nucleotidyltransferase family protein compare
ABZR86_RS13880 -2.4 -3.5 peptide deformylase compare
ABZR86_RS12410 -2.3 -4.1 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
ABZR86_RS09885 -2.2 -2.6 trypsin-like peptidase domain-containing protein compare
ABZR86_RS12595 -2.2 -2.3 cell division ATP-binding protein FtsE compare
ABZR86_RS07215 -2.2 -5.0 FKBP-type peptidyl-prolyl cis-trans isomerase compare
ABZR86_RS12895 -2.1 -5.4 heme o synthase compare
ABZR86_RS19235 -2.1 -4.2 phosphoribosylformylglycinamidine synthase compare
ABZR86_RS07175 -2.0 -4.5 sigma-E factor negative regulatory protein compare
ABZR86_RS07560 -2.0 -9.9 NAD-glutamate dehydrogenase domain-containing protein compare
ABZR86_RS01885 -2.0 -1.6 DUF5668 domain-containing protein compare
ABZR86_RS10710 -2.0 -1.5 transcriptional regulator NrdR compare
ABZR86_RS19865 -2.0 -3.5 phosphoribosylformylglycinamidine cyclo-ligase compare
ABZR86_RS13935 -1.8 -4.5 lipid A biosynthesis acyltransferase compare
ABZR86_RS07665 -1.8 -4.5 exodeoxyribonuclease V subunit beta compare
ABZR86_RS07310 -1.8 -4.8 tRNA-Val compare
ABZR86_RS20605 -1.8 -2.1 FeoA family protein compare
ABZR86_RS12605 -1.8 -2.8 thioredoxin TrxA compare
ABZR86_RS15695 -1.8 -1.6 23S ribosomal RNA compare
ABZR86_RS09935 -1.7 -1.7 DUF4105 domain-containing protein compare
ABZR86_RS21575 -1.7 -5.5 [protein-PII] uridylyltransferase compare
ABZR86_RS12215 -1.7 -3.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABZR86_RS12835 -1.6 -4.5 DedA family protein compare
ABZR86_RS07265 -1.6 -5.5 protein phosphatase 2C domain-containing protein compare
ABZR86_RS00685 -1.6 -2.2 carbon storage regulator CsrA compare
ABZR86_RS21435 -1.6 -5.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
ABZR86_RS18450 -1.6 -3.4 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha compare
ABZR86_RS10830 -1.5 -2.2 Holliday junction branch migration DNA helicase RuvB compare
ABZR86_RS17480 -1.5 -8.5 lytic murein transglycosylase B compare
ABZR86_RS17485 -1.4 -10.6 septal ring lytic transglycosylase RlpA family protein compare
ABZR86_RS06355 -1.4 -2.7 folate-binding protein YgfZ compare
ABZR86_RS18765 -1.4 -3.1 dehydrogenase compare
ABZR86_RS18780 -1.4 -2.3 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
ABZR86_RS02795 -1.4 -1.9 phosphoglycerate mutase compare
ABZR86_RS18585 -1.4 -6.5 polysaccharide biosynthesis/export family protein compare
ABZR86_RS06580 -1.4 -2.8 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR86_RS21480 -1.3 -6.1 arginase family protein compare
ABZR86_RS14690 -1.3 -4.6 phosphogluconate dehydratase compare
ABZR86_RS11870 -1.3 -8.1 phospholipid-binding protein MlaC compare
ABZR86_RS17095 -1.3 -5.8 protein-disulfide reductase DsbD compare
ABZR86_RS11885 -1.3 -4.3 ATP-binding cassette domain-containing protein compare
ABZR86_RS19805 -1.3 -5.3 HPr(Ser) kinase/phosphatase compare
ABZR86_RS18705 -1.3 -1.6 pyridoxal-phosphate dependent enzyme compare
ABZR86_RS11880 -1.3 -4.5 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
ABZR86_RS18655 -1.2 -4.7 transketolase compare
ABZR86_RS18725 -1.2 -4.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR86_RS12900 -1.1 -6.6 heme A synthase compare
ABZR86_RS18545 -1.1 -7.3 hypothetical protein compare
ABZR86_RS06265 -1.1 -4.1 3-deoxy-D-manno-octulosonic acid kinase compare
ABZR86_RS11825 -1.1 -2.1 citrate synthase compare
ABZR86_RS09265 -1.1 -7.1 hypothetical protein compare
ABZR86_RS09295 -1.1 -2.0 nucleoside-diphosphate sugar epimerase compare
ABZR86_RS08150 -1.1 -1.4 DeoR/GlpR family DNA-binding transcription regulator compare
ABZR86_RS13095 -1.1 -4.3 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
ABZR86_RS13920 -1.1 -7.8 CDP-glycerol glycerophosphotransferase family protein compare
ABZR86_RS18885 -1.1 -4.0 met regulon transcriptional regulator MetJ compare
ABZR86_RS18715 -1.1 -5.1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
ABZR86_RS05445 -1.1 -2.3 helix-turn-helix domain-containing protein compare
ABZR86_RS13355 -1.0 -7.2 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR86_RS12590 -1.0 -8.0 permease-like cell division protein FtsX compare
ABZR86_RS00660 -1.0 -3.0 recombinase RecA compare
ABZR86_RS19225 -1.0 -2.4 site-specific tyrosine recombinase XerD compare
ABZR86_RS11975 -1.0 -1.1 UPF0149 family protein compare
ABZR86_RS01945 -1.0 -1.4 preprotein translocase subunit SecG compare
ABZR86_RS08430 -1.0 -1.7 2-methylaconitate cis-trans isomerase PrpF compare
ABZR86_RS06630 -1.0 -3.1 phosphopyruvate hydratase compare
ABZR86_RS09450 -1.0 -2.7 winged helix-turn-helix transcriptional regulator compare
ABZR86_RS07660 -1.0 -4.0 exodeoxyribonuclease V subunit gamma compare
ABZR86_RS14610 -1.0 -1.7 conjugal transfer protein TrbN compare
ABZR86_RS19795 -1.0 -4.0 PTS sugar transporter subunit IIA compare
ABZR86_RS18770 -1.0 -3.2 SIS domain-containing protein compare
ABZR86_RS04640 -1.0 -4.5 FecR domain-containing protein compare
ABZR86_RS20340 -1.0 -1.1 nuclear transport factor 2 family protein compare
ABZR86_RS21315 -1.0 -5.0 GldG family protein compare
ABZR86_RS06575 -1.0 -3.4 Mth938-like domain-containing protein compare
ABZR86_RS11720 -1.0 -1.7 ABC transporter ATP-binding protein compare
ABZR86_RS13370 -1.0 -4.9 twin-arginine translocase subunit TatC compare
ABZR86_RS10315 -1.0 -4.2 Imm42 family immunity protein compare
ABZR86_RS09380 -1.0 -3.5 response regulator transcription factor compare
ABZR86_RS12930 -1.0 -6.2 cytochrome c oxidase subunit II compare
ABZR86_RS17880 -0.9 -1.7 hypothetical protein compare
ABZR86_RS02305 -0.9 -1.3 hypothetical protein compare
ABZR86_RS06270 -0.9 -3.3 glycosyltransferase family 9 protein compare
ABZR86_RS10840 -0.9 -1.5 Holliday junction branch migration protein RuvA compare
ABZR86_RS21320 -0.9 -4.9 ABC transporter permease subunit compare
ABZR86_RS05820 -0.9 -3.0 GntR family transcriptional regulator compare
ABZR86_RS15330 -0.9 -5.6 TetR/AcrR family transcriptional regulator compare
ABZR86_RS09660 -0.9 -1.4 MerR family transcriptional regulator compare
ABZR86_RS08775 -0.9 -1.2 HAD-IA family hydrolase compare
ABZR86_RS12280 -0.9 -1.2 dihydrolipoyl dehydrogenase compare
ABZR86_RS13380 -0.9 -1.4 Sec-independent protein translocase subunit TatA compare
ABZR86_RS07340 -0.9 -2.0 tRNA-Leu compare
ABZR86_RS12925 -0.9 -6.1 cytochrome c oxidase subunit I compare
ABZR86_RS20600 -0.9 -4.7 ferrous iron transporter B compare
ABZR86_RS13415 -0.9 -1.5 DUF1656 domain-containing protein compare
ABZR86_RS18360 -0.9 -5.8 response regulator transcription factor compare
ABZR86_RS12790 -0.9 -2.4 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase compare
ABZR86_RS02310 -0.9 -1.5 hypothetical protein compare
ABZR86_RS06690 -0.9 -2.3 acireductone synthase compare
ABZR86_RS11860 -0.9 -6.5 VacJ family lipoprotein compare
ABZR86_RS16045 -0.9 -4.2 N-acetylglucosamine-6-phosphate deacetylase compare
ABZR86_RS11875 -0.9 -5.8 outer membrane lipid asymmetry maintenance protein MlaD compare
ABZR86_RS08250 -0.9 -1.8 phosphate signaling complex protein PhoU compare
ABZR86_RS02215 -0.8 -2.0 FHA domain-containing protein compare
ABZR86_RS07620 -0.8 -6.7 cytochrome o ubiquinol oxidase subunit I compare
ABZR86_RS01730 -0.8 -1.3 DUF3820 family protein compare
ABZR86_RS13895 -0.8 -6.2 glycosyltransferase family 39 protein compare
ABZR86_RS18460 -0.8 -5.9 oligopeptide:H+ symporter compare
ABZR86_RS14165 -0.8 -1.0 hypothetical protein compare
ABZR86_RS02180 -0.8 -2.1 high frequency lysogenization protein HflD compare
ABZR86_RS11460 -0.8 -1.7 hypothetical protein compare
ABZR86_RS05700 -0.8 -1.9 SsrA-binding protein SmpB compare
ABZR86_RS11820 -0.8 -2.4 hypothetical protein compare
ABZR86_RS10120 -0.8 -5.4 TonB-dependent receptor compare
ABZR86_RS06275 -0.8 -2.9 DUF6165 family protein compare
ABZR86_RS12920 -0.8 -5.9 cytochrome c oxidase subunit 3 compare
ABZR86_RS20570 -0.8 -3.1 acetyl-CoA C-acyltransferase compare
ABZR86_RS18760 -0.8 -5.2 glycosyltransferase compare
ABZR86_RS12760 -0.8 -5.1 LTA synthase family protein compare
ABZR86_RS09500 -0.8 -4.9 phosphotransferase compare
ABZR86_RS05570 -0.8 -3.2 (d)CMP kinase compare
ABZR86_RS18355 -0.8 -1.3 PepSY domain-containing protein compare
ABZR86_RS08480 -0.8 -2.9 methylisocitrate lyase compare
ABZR86_RS06030 -0.8 -1.0 transcription termination factor NusA compare
ABZR86_RS13915 -0.8 -5.5 glycosyltransferase family 2 protein compare
ABZR86_RS03435 -0.8 -3.8 GTP cyclohydrolase II compare
ABZR86_RS20595 -0.8 -0.7 DUF6587 family protein compare
ABZR86_RS21350 -0.8 -2.8 septum site-determining protein MinC compare
ABZR86_RS22190 -0.8 -1.0 hypothetical protein compare
ABZR86_RS15665 -0.7 -3.3 anhydro-N-acetylmuramic acid kinase compare
ABZR86_RS13500 -0.7 -2.5 accessory factor UbiK family protein compare
ABZR86_RS16040 -0.7 -0.8 molybdopterin-dependent oxidoreductase compare
ABZR86_RS02500 -0.7 -1.4 hypothetical protein compare
ABZR86_RS16775 -0.7 -2.5 putative holin compare
ABZR86_RS04915 -0.7 -1.3 DUF3540 domain-containing protein compare
ABZR86_RS13465 -0.7 -1.6 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB compare
ABZR86_RS06590 -0.7 -1.5 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABZR86_RS00645 -0.7 -4.0 FecR domain-containing protein compare
ABZR86_RS15655 -0.7 -5.9 MFS transporter compare
ABZR86_RS03975 -0.7 -1.5 class I SAM-dependent methyltransferase compare
ABZR86_RS07615 -0.7 -3.1 cytochrome o ubiquinol oxidase subunit III compare
ABZR86_RS11900 -0.7 -2.3 ribonuclease PH compare
ABZR86_RS12995 -0.7 -3.7 ankyrin repeat domain-containing protein compare
ABZR86_RS13710 -0.7 -1.1 hypothetical protein compare
ABZR86_RS22135 -0.7 -2.4 hypothetical protein compare
ABZR86_RS17090 -0.7 -1.6 TlpA disulfide reductase family protein compare
ABZR86_RS07610 -0.7 -2.7 cytochrome o ubiquinol oxidase subunit IV compare
ABZR86_RS07165 -0.7 -4.9 translation elongation factor 4 compare
ABZR86_RS11655 -0.7 -2.9 SLC13 family permease compare
ABZR86_RS03640 -0.7 -1.8 DUF488 family protein compare
ABZR86_RS20820 -0.7 -0.9 CsbD family protein compare
ABZR86_RS18815 -0.7 -2.4 FAD-binding protein compare
ABZR86_RS18720 -0.7 -1.8 dTDP-4-dehydrorhamnose reductase compare
ABZR86_RS18595 -0.7 -3.3 capsule biosynthesis GfcC family protein compare
ABZR86_RS09145 -0.7 -2.4 hypothetical protein compare
ABZR86_RS07820 -0.7 -0.9 Spy/CpxP family protein refolding chaperone compare
ABZR86_RS18600 -0.7 -5.5 YjbH domain-containing protein compare
ABZR86_RS12940 -0.6 -5.3 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA compare
ABZR86_RS09400 -0.6 -2.9 MtnX-like HAD-IB family phosphatase compare
ABZR86_RS04495 -0.6 -0.8 hypothetical protein compare
ABZR86_RS12935 -0.6 -1.8 DUF2244 domain-containing protein compare
ABZR86_RS03625 -0.6 -1.4 response regulator compare
ABZR86_RS12210 -0.6 -3.0 c-type cytochrome compare
ABZR86_RS00310 -0.6 -1.7 AraC family transcriptional regulator compare
ABZR86_RS20235 -0.6 -0.7 flagellar biosynthesis protein FliQ compare
ABZR86_RS10365 -0.6 -1.4 response regulator compare
ABZR86_RS13940 -0.6 -2.7 D-aminoacyl-tRNA deacylase compare
ABZR86_RS00115 -0.6 -2.7 DUF1579 domain-containing protein compare
ABZR86_RS02200 -0.6 -4.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR86_RS07580 -0.6 -1.6 metalloregulator ArsR/SmtB family transcription factor compare
ABZR86_RS02245 -0.6 -4.3 excinuclease ABC subunit UvrC compare
ABZR86_RS21725 -0.6 -4.5 YhdP family protein compare
ABZR86_RS01150 -0.6 -0.8 hypothetical protein compare
ABZR86_RS09415 -0.6 -3.1 ABC transporter ATP-binding protein compare
ABZR86_RS09505 -0.6 -3.9 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare
ABZR86_RS05545 -0.6 -3.7 glycosyltransferase family 4 protein compare
ABZR86_RS07605 -0.6 -2.1 SURF1 family protein compare
ABZR86_RS02255 -0.6 -1.3 tRNA-Gly compare
ABZR86_RS03180 -0.6 -1.3 peptidylprolyl isomerase compare
ABZR86_RS19630 -0.6 -0.9 hypothetical protein compare
ABZR86_RS02135 -0.6 -1.4 pseudouridine synthase compare
ABZR86_RS03430 -0.6 -1.0 putative quinol monooxygenase compare
ABZR86_RS18730 -0.6 -3.4 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR86_RS18925 -0.6 -3.2 Hsp33 family molecular chaperone HslO compare
ABZR86_RS15515 -0.6 -2.7 nitrogen regulation protein NR(I) compare
ABZR86_RS12200 -0.6 -2.7 ribulose-phosphate 3-epimerase compare
ABZR86_RS07625 -0.6 -3.1 ubiquinol oxidase subunit II compare
ABZR86_RS18735 -0.6 -2.8 dTDP-glucose 4,6-dehydratase compare
ABZR86_RS10425 -0.6 -1.7 pyrroline-5-carboxylate reductase compare


Specific Phenotypes

None in this experiment

For Dyella japonica UNC79MFTsu3.2 in stress experiments

For stress MreB Perturbing Compound A22 across organisms