Experiment set3IT065 for Methanococcus maripaludis JJ

Compare to:

formate vitamin complete

200 most important genes:

  gene name fitness t score description  
MMJJ_RS00235 -6.2 -24.7 hypothetical protein compare
MMJJ_RS01935 -5.5 -3.8 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS04200 -5.4 -7.4 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS06625 -5.3 -3.1 pyruvate synthase subunit PorB compare
MMJJ_RS00210 -4.9 -3.3 DUF530 family protein compare
MMJJ_RS07720 -4.9 -2.8 UPF0058 family protein compare
MMJJ_RS05450 -4.9 -18.0 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMJJ_RS05575 -4.8 -5.7 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS00570 -4.7 -3.0 ribonuclease P compare
MMJJ_RS06855 -4.5 -2.2 DUF2104 domain-containing protein compare
MMJJ_RS05930 -4.5 -3.0 cell division protein SepF compare
MMJJ_RS07950 -4.4 -4.3 4Fe-4S binding protein compare
MMJJ_RS03670 -4.4 -6.7 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS03840 -4.3 -4.1 DHH family phosphoesterase compare
MMJJ_RS06860 -4.3 -6.3 hypothetical protein compare
MMJJ_RS00355 -4.2 -4.1 ribonuclease P protein component 4 compare
MMJJ_RS01360 -4.2 -2.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS06490 -4.2 -4.0 methanogenesis marker 2 protein compare
MMJJ_RS05610 -4.2 -4.9 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS05535 -4.1 -16.6 hypothetical protein compare
MMJJ_RS03785 -4.1 -2.8 hypothetical protein compare
MMJJ_RS09175 -4.1 -1.7 anthranilate synthase component I compare
MMJJ_RS06510 -4.0 -4.5 LL-diaminopimelate aminotransferase compare
MMJJ_RS02920 -4.0 -3.6 30S ribosomal protein S27ae compare
MMJJ_RS09375 -4.0 -2.7 hypothetical protein compare
MMJJ_RS08335 -4.0 -3.8 ABC transporter ATP-binding protein compare
MMJJ_RS05380 -4.0 -1.6 hypothetical protein compare
MMJJ_RS04050 -3.9 -2.9 dihydroneopterin aldolase family protein compare
MMJJ_RS00125 -3.9 -2.7 KEOPS complex subunit Cgi121 compare
MMJJ_RS08020 -3.9 -10.3 nucleotidyltransferase domain-containing protein compare
MMJJ_RS03620 -3.9 -6.3 DUF2097 domain-containing protein compare
MMJJ_RS04485 -3.9 -10.8 riboflavin synthase compare
MMJJ_RS03895 -3.9 -5.0 hydrogenase expression/formation protein HypE compare
MMJJ_RS07360 -3.9 -2.5 TIGR00269 family protein compare
MMJJ_RS06695 -3.9 -4.6 amidohydrolase compare
MMJJ_RS06180 -3.9 -3.7 tryptophan--tRNA ligase compare
MMJJ_RS04520 -3.8 -8.9 coenzyme F430 synthase compare
MMJJ_RS07665 -3.8 -23.2 formate dehydrogenase subunit alpha compare
MMJJ_RS03095 -3.8 -3.7 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS06725 -3.8 -16.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS07705 -3.8 -4.5 GTP-binding protein EngB compare
MMJJ_RS02045 -3.8 -5.3 molybdenum cofactor guanylyltransferase compare
MMJJ_RS06040 -3.8 -5.6 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS03200 -3.7 -3.3 uroporphyrinogen-III synthase compare
MMJJ_RS06910 -3.7 -4.2 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS04995 -3.7 -8.4 Tfx family DNA-binding protein compare
MMJJ_RS03820 -3.7 -5.5 hydrogenase formation protein HypD compare
MMJJ_RS08625 -3.7 -7.8 magnesium/cobalt transporter CorA compare
MMJJ_RS01870 -3.7 -3.3 methanogenesis marker 15 protein compare
MMJJ_RS00580 -3.6 -3.2 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS00215 -3.6 -3.3 CCA tRNA nucleotidyltransferase compare
MMJJ_RS01600 -3.6 -4.2 radical SAM protein compare
MMJJ_RS05445 -3.6 -3.3 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS08795 -3.6 -4.1 phosphoglucosamine mutase compare
MMJJ_RS05330 -3.6 -3.4 DNA polymerase II large subunit compare
MMJJ_RS04800 -3.5 -8.6 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS05650 -3.5 -4.6 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS06875 -3.5 -4.9 hypothetical protein compare
MMJJ_RS03270 -3.5 -3.1 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS03110 -3.5 -5.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS01755 -3.5 -3.3 ferrous iron transport protein B compare
MMJJ_RS04685 -3.5 -10.3 carbamoyltransferase HypF compare
MMJJ_RS08660 -3.5 -4.0 acetylornithine transaminase compare
MMJJ_RS05070 -3.4 -3.7 DNA primase catalytic subunit PriS compare
MMJJ_RS03615 -3.4 -5.1 cobalt-precorrin-8 methylmutase compare
MMJJ_RS07670 -3.4 -17.6 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS07380 -3.4 -11.5 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS01355 -3.3 -4.3 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS00560 -3.3 -4.7 homoisocitrate dehydrogenase compare
MMJJ_RS04475 -3.3 -5.6 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS06915 -3.2 -14.8 helix-turn-helix domain-containing protein compare
MMJJ_RS05950 -3.2 -4.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS03190 -3.2 -3.7 phosphopyruvate hydratase compare
MMJJ_RS06390 -3.2 -3.2 NADPH-dependent F420 reductase compare
MMJJ_RS06110 -3.2 -3.2 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS03055 -3.2 -3.6 hypothetical protein compare
MMJJ_RS04730 -3.2 -4.2 tyrosine decarboxylase MfnA compare
MMJJ_RS03875 -3.2 -6.3 CBS domain-containing protein compare
MMJJ_RS00275 -3.1 -2.6 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS08330 -3.1 -4.7 SufD family Fe-S cluster assembly protein compare
MMJJ_RS03005 -3.1 -5.0 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS08250 -3.1 -8.8 hydrogenase maturation peptidase HycI compare
MMJJ_RS04790 -3.0 -4.8 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS07655 -3.0 -15.2 hypothetical protein compare
MMJJ_RS08005 -3.0 -17.4 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS00475 -3.0 -3.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS05065 -3.0 -7.0 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS08055 -3.0 -6.2 methanogenesis marker 14 protein compare
MMJJ_RS05995 -3.0 -3.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS00425 -3.0 -3.7 hypothetical protein compare
MMJJ_RS05260 -3.0 -6.9 ATP-grasp domain-containing protein compare
MMJJ_RS06175 -3.0 -3.2 DUF1743 domain-containing protein compare
MMJJ_RS08080 -3.0 -12.2 TIGR00300 family protein compare
MMJJ_RS06865 -3.0 -4.2 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS03865 -3.0 -2.5 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS01475 -2.9 -2.8 signal recognition particle-docking protein FtsY compare
MMJJ_RS01565 -2.9 -9.7 TIGR00267 family protein compare
MMJJ_RS07245 -2.9 -6.9 amidohydrolase family protein compare
MMJJ_RS05655 -2.9 -7.7 HisA/HisF family protein compare
MMJJ_RS08000 -2.9 -10.4 HesA/MoeB/ThiF family protein compare
MMJJ_RS04675 -2.9 -7.8 thiamine pyrophosphate-binding protein compare
MMJJ_RS06220 -2.9 -7.0 polyamine aminopropyltransferase compare
MMJJ_RS06785 -2.9 -7.9 RNA ligase partner protein compare
MMJJ_RS08095 -2.9 -5.9 cobyric acid synthase CobQ compare
MMJJ_RS00270 -2.9 -4.4 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS07725 -2.8 -7.1 DNA primase DnaG compare
MMJJ_RS06485 -2.8 -4.1 phosphoglycerate kinase compare
MMJJ_RS05490 -2.8 -4.2 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS03580 -2.8 -4.6 TIGR00303 family protein compare
MMJJ_RS03150 -2.8 -7.4 2-phospho-L-lactate transferase compare
MMJJ_RS03245 -2.8 -2.3 UMP kinase compare
MMJJ_RS06255 -2.8 -8.3 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS08320 -2.8 -3.6 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS07945 -2.8 -3.4 4Fe-4S binding protein compare
MMJJ_RS06840 -2.7 -5.1 nickel-dependent hydrogenase large subunit compare
MMJJ_RS03830 -2.7 -11.2 CBS domain-containing protein compare
MMJJ_RS03295 -2.7 -15.8 PHP domain-containing protein compare
MMJJ_RS04155 -2.7 -5.5 hypothetical protein compare
MMJJ_RS07470 -2.7 -2.9 50S ribosome-binding GTPase compare
MMJJ_RS03660 -2.7 -5.5 DUF447 family protein compare
MMJJ_RS04980 -2.6 -6.8 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS05620 -2.6 -5.9 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS01865 -2.6 -7.2 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS06730 -2.6 -8.4 ATP-binding cassette domain-containing protein compare
MMJJ_RS06215 -2.6 -5.8 agmatinase compare
MMJJ_RS06930 -2.6 -2.9 type II methionyl aminopeptidase compare
MMJJ_RS06240 -2.6 -2.5 dihydropteroate synthase-like protein compare
MMJJ_RS06760 -2.6 -5.4 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS00075 -2.5 -11.7 AAA family ATPase compare
MMJJ_RS02090 -2.5 -5.4 tyramine--L-glutamate ligase compare
MMJJ_RS08535 -2.5 -4.7 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS08340 -2.5 -4.8 archaeoflavoprotein AfpA compare
MMJJ_RS00050 -2.5 -13.2 AAA family ATPase compare
MMJJ_RS01750 -2.5 -3.1 ferrous iron transport protein A compare
MMJJ_RS06250 -2.5 -3.3 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS07370 -2.5 -5.2 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS03065 -2.5 -11.4 CBS domain-containing protein compare
MMJJ_RS03760 -2.4 -3.1 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS03800 -2.4 -10.5 aldolase compare
MMJJ_RS00600 -2.4 -3.4 hydroxymethylbilane synthase compare
MMJJ_RS05590 -2.4 -2.6 homoserine dehydrogenase compare
MMJJ_RS05810 -2.4 -7.3 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS05360 -2.3 -6.8 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS02035 -2.3 -6.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS03630 -2.3 -12.2 AMP phosphorylase compare
MMJJ_RS06835 -2.3 -11.0 4Fe-4S binding protein compare
MMJJ_RS07660 -2.3 -8.2 carbonic anhydrase compare
MMJJ_RS05190 -2.3 -8.3 gamma carbonic anhydrase family protein compare
MMJJ_RS06375 -2.3 -4.8 UbiX family flavin prenyltransferase compare
MMJJ_RS04670 -2.3 -4.8 DUF2117 domain-containing protein compare
MMJJ_RS00035 -2.3 -14.4 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS07000 -2.2 -2.2 TrkH family potassium uptake protein compare
MMJJ_RS05375 -2.2 -14.1 radical SAM protein compare
MMJJ_RS06750 -2.2 -2.5 homoaconitase large subunit compare
MMJJ_RS00070 -2.2 -4.9 CooT family nickel-binding protein compare
MMJJ_RS07415 -2.2 -3.3 polyprenyl diphosphate synthase compare
MMJJ_RS00060 -2.2 -14.9 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS07410 -2.2 -3.7 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS06705 -2.2 -5.3 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS01880 -2.2 -3.0 RlmE family RNA methyltransferase compare
MMJJ_RS06185 -2.2 -6.7 cobalamin biosynthesis protein compare
MMJJ_RS06155 -2.1 -4.8 phosphatidylglycerophosphatase A compare
MMJJ_RS00040 -2.1 -11.0 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS07640 -2.1 -17.2 cache domain-containing protein compare
MMJJ_RS03115 -2.1 -6.1 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS06170 -2.1 -9.1 hypothetical protein compare
MMJJ_RS01690 -2.1 -3.8 methanogenesis marker 12 protein compare
MMJJ_RS03845 -2.1 -3.7 translation initiation factor IF-2 compare
MMJJ_RS00045 -2.1 -14.3 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS03160 -2.1 -12.7 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07345 -2.1 -6.1 homocysteine biosynthesis protein compare
MMJJ_RS00530 -2.1 -10.9 cobalt ECF transporter T component CbiQ compare
MMJJ_RS05415 -2.1 -2.1 hypothetical protein compare
MMJJ_RS00065 -2.1 -9.5 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS00055 -2.1 -8.6 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS02055 -2.1 -11.9 GTP 3',8-cyclase MoaA compare
MMJJ_RS07635 -2.1 -11.0 response regulator transcription factor compare
MMJJ_RS01345 -2.1 -4.4 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS02275 -2.1 -3.5 nucleotidyltransferase domain-containing protein compare
MMJJ_RS06050 -2.1 -10.4 molybdopterin molybdotransferase MoeA compare
MMJJ_RS03125 -2.1 -3.2 GMC oxidoreductase compare
MMJJ_RS08855 -2.1 -4.0 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS05225 -2.0 -2.1 Gar1/Naf1 family protein compare
MMJJ_RS08155 -2.0 -3.5 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS08850 -2.0 -3.0 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS01875 -2.0 -5.8 global nitrogen regulator NrpR compare
MMJJ_RS07155 -2.0 -8.3 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS09055 -2.0 -9.0 NFACT family protein compare
MMJJ_RS06225 -1.9 -2.1 adenosylmethionine decarboxylase compare
MMJJ_RS00080 -1.9 -11.3 DUF166 domain-containing protein compare
MMJJ_RS04565 -1.9 -2.1 sirohydrochlorin nickelochelatase compare
MMJJ_RS04650 -1.9 -6.0 nitrogenase iron protein compare
MMJJ_RS05935 -1.9 -2.9 Era-like GTP-binding protein compare
MMJJ_RS04010 -1.9 -7.1 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS03815 -1.9 -2.5 nascent polypeptide-associated complex protein compare
MMJJ_RS00450 -1.9 -2.1 DUF126 domain-containing protein compare
MMJJ_RS09190 -1.9 -2.4 tryptophan synthase subunit beta compare
MMJJ_RS02935 -1.8 -2.5 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS02040 -1.8 -2.3 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS07650 -1.8 -13.0 formate/nitrite transporter family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments