Experiment set3IT063 for Methanococcus maripaludis JJ

Compare to:

formate McAA lipolic acid dropout

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.7 12.4 hypothetical protein compare
MMJJ_RS08830 +1.0 3.8 hypothetical protein compare
MMJJ_RS04005 +0.9 6.9 acetate--CoA ligase family protein compare
MMJJ_RS03725 +0.9 3.0 sulfurtransferase TusA family protein compare
MMJJ_RS03360 +0.8 1.7 hypothetical protein compare
MMJJ_RS08935 +0.7 1.2 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS08130 +0.7 0.8 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS06680 +0.7 4.4 DUF366 family protein compare
MMJJ_RS01785 +0.7 1.2 50S ribosomal protein L14e compare
MMJJ_RS07235 +0.6 5.1 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS06505 +0.6 2.7 prephenate dehydratase compare
MMJJ_RS07025 +0.6 3.1 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS06500 +0.6 3.8 class I SAM-dependent methyltransferase compare
MMJJ_RS05685 +0.6 3.4 class III signal peptide-containing protein compare
MMJJ_RS07220 +0.6 4.3 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS07225 +0.5 4.1 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS06460 +0.5 3.3 cytochrome c compare
MMJJ_RS07230 +0.5 3.5 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS06950 +0.5 4.0 4-demethylwyosine synthase TYW1 compare
MMJJ_RS09295 +0.5 0.6 hypothetical protein compare
MMJJ_RS07280 +0.5 3.2 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS07680 +0.5 3.6 glucose-6-phosphate isomerase compare
MMJJ_RS09120 +0.5 1.2 aspartate kinase compare
MMJJ_RS07240 +0.5 4.1 MBL fold metallo-hydrolase compare
MMJJ_RS03835 +0.5 1.9 DUF504 domain-containing protein compare
MMJJ_RS06275 +0.5 2.2 hypothetical protein compare
MMJJ_RS04955 +0.5 3.0 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS07920 +0.5 3.1 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS01530 +0.5 1.3 YwbE family protein compare
MMJJ_RS03250 +0.4 0.9 DUF2116 family Zn-ribbon domain-containing protein compare
MMJJ_RS06190 +0.4 3.5 7-cyano-7-deazaguanine synthase compare
MMJJ_RS07890 +0.4 2.5 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS07985 +0.4 2.6 hypothetical protein compare
MMJJ_RS06800 +0.4 2.3 prefoldin subunit alpha compare
MMJJ_RS04105 +0.4 3.6 prepilin peptidase compare
MMJJ_RS04545 +0.4 2.1 PadR family transcriptional regulator compare
MMJJ_RS06205 +0.4 3.0 EamA family transporter compare
MMJJ_RS07210 +0.4 3.2 AmmeMemoRadiSam system protein B compare
MMJJ_RS03605 +0.4 1.4 TIGR00297 family protein compare
MMJJ_RS06495 +0.4 1.8 hypothetical protein compare
MMJJ_RS02665 +0.4 1.2 methyl-accepting chemotaxis protein compare
MMJJ_RS06585 +0.4 2.3 alanine racemase compare
MMJJ_RS06675 +0.4 2.9 TIGR01212 family radical SAM protein compare
MMJJ_RS06090 +0.4 2.3 hypothetical protein compare
MMJJ_RS06640 +0.4 2.6 YfcE family phosphodiesterase compare
MMJJ_RS03375 +0.4 2.0 hypothetical protein compare
MMJJ_RS08485 +0.4 1.5 Lrp/AsnC family transcriptional regulator compare
MMJJ_RS06745 +0.4 2.4 energy-coupling factor ABC transporter permease compare
MMJJ_RS04340 +0.4 1.2 hypothetical protein compare
MMJJ_RS05580 +0.4 2.3 methanogenesis marker 9 domain-containing protein compare
MMJJ_RS00785 +0.4 1.0 hypothetical protein compare
MMJJ_RS06535 +0.4 3.0 UPF0104 family protein compare
MMJJ_RS07010 +0.4 1.9 preprotein translocase subunit Sec61beta compare
MMJJ_RS06770 +0.4 3.0 hypothetical protein compare
MMJJ_RS02270 +0.4 1.6 HEPN domain-containing protein compare
MMJJ_RS05040 +0.3 2.6 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS05980 +0.3 2.2 DUF5400 domain-containing protein compare
MMJJ_RS06735 +0.3 2.3 cobalt ECF transporter T component CbiQ compare
MMJJ_RS04870 +0.3 0.4 tRNA-Asp compare
MMJJ_RS05350 +0.3 1.8 DUF192 domain-containing protein compare
MMJJ_RS06685 +0.3 2.9 S-layer protein compare
MMJJ_RS07445 +0.3 2.5 RlmF-related methyltransferase compare
MMJJ_RS07820 +0.3 2.6 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS06470 +0.3 2.3 tripartite tricarboxylate transporter permease compare
MMJJ_RS07935 +0.3 0.3 protein fwdD compare
MMJJ_RS08100 +0.3 1.8 hypothetical protein compare
MMJJ_RS06790 +0.3 2.8 nucleotidyltransferase family protein compare
MMJJ_RS08520 +0.3 1.1 peptidylprolyl isomerase compare
MMJJ_RS00745 +0.3 1.4 hypothetical protein compare
MMJJ_RS05960 +0.3 2.2 DUF169 domain-containing protein compare
MMJJ_RS00145 +0.3 2.4 aquaporin family protein compare
MMJJ_RS06440 +0.3 2.2 DUF4870 domain-containing protein compare
MMJJ_RS07015 +0.3 0.5 PFL family protein compare
MMJJ_RS07260 +0.3 2.0 PspC domain-containing protein compare
MMJJ_RS01855 +0.3 2.3 MBL fold metallo-hydrolase compare
MMJJ_RS06765 +0.3 2.6 hypothetical protein compare
MMJJ_RS06515 +0.3 2.4 ribonuclease III compare
MMJJ_RS08305 +0.3 1.6 peroxiredoxin compare
MMJJ_RS01010 +0.3 2.8 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS05520 +0.3 2.1 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMJJ_RS04215 +0.3 2.5 DMT family transporter compare
MMJJ_RS00405 +0.3 1.5 flavodoxin family protein compare
MMJJ_RS07795 +0.3 1.9 cupin domain-containing protein compare
MMJJ_RS00630 +0.3 1.7 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMJJ_RS06810 +0.3 2.3 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06430 +0.3 1.6 haloacid dehalogenase compare
MMJJ_RS06740 +0.3 1.6 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS03345 +0.3 1.6 hypothetical protein compare
MMJJ_RS06960 +0.3 2.4 CAP domain-containing protein compare
MMJJ_RS05115 +0.3 0.9 P-II family nitrogen regulator compare
MMJJ_RS08515 +0.3 1.3 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS06385 +0.3 1.4 hypothetical protein compare
MMJJ_RS06120 +0.3 2.0 DUF4013 domain-containing protein compare
MMJJ_RS08165 +0.3 1.5 thermonuclease family protein compare
MMJJ_RS01250 +0.3 0.9 hypothetical protein compare
MMJJ_RS06280 +0.3 2.0 hypothetical protein compare
MMJJ_RS05915 +0.3 0.7 multiprotein bridging factor aMBF1 compare
MMJJ_RS05700 +0.2 1.8 metallophosphoesterase compare
MMJJ_RS05750 +0.2 1.9 flagellar accessory protein FlaH compare
MMJJ_RS07255 +0.2 2.2 hypothetical protein compare
MMJJ_RS07800 +0.2 1.9 AMP-binding protein compare
MMJJ_RS07205 +0.2 1.0 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS06975 +0.2 1.5 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS03515 +0.2 1.6 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS05410 +0.2 1.6 RecB-family nuclease compare
MMJJ_RS05530 +0.2 0.9 roadblock/LC7 domain-containing protein compare
MMJJ_RS07905 +0.2 1.6 DUF89 domain-containing protein compare
MMJJ_RS04855 +0.2 1.9 ECF transporter S component compare
MMJJ_RS03070 +0.2 0.9 MetS family NSS transporter small subunit compare
MMJJ_RS01670 +0.2 1.3 hypothetical protein compare
MMJJ_RS02180 +0.2 1.4 DHH family phosphoesterase compare
MMJJ_RS05975 +0.2 1.5 sulfurtransferase TusA family protein compare
MMJJ_RS06710 +0.2 1.8 TldD/PmbA family protein compare
MMJJ_RS00150 +0.2 1.3 DUF2180 family protein compare
MMJJ_RS07270 +0.2 1.5 ribonuclease HII compare
MMJJ_RS04375 +0.2 0.8 hypothetical protein compare
MMJJ_RS01140 +0.2 1.0 helix-turn-helix domain-containing protein compare
MMJJ_RS07815 +0.2 1.6 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS08380 +0.2 0.3 hypothetical protein compare
MMJJ_RS08880 +0.2 0.9 IMPACT family protein compare
MMJJ_RS06450 +0.2 1.6 DUF3343 domain-containing protein compare
MMJJ_RS02330 +0.2 1.7 ABC transporter ATP-binding protein compare
MMJJ_RS05340 +0.2 1.5 AAA family ATPase compare
MMJJ_RS07810 +0.2 1.3 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS03775 +0.2 0.7 50S ribosomal protein L15e compare
MMJJ_RS06135 +0.2 1.5 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS09405 +0.2 0.6 hypothetical protein compare
MMJJ_RS08315 +0.2 1.3 DNA protection protein DPS compare
MMJJ_RS08160 +0.2 1.0 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMJJ_RS08375 +0.2 1.4 ferritin compare
MMJJ_RS03715 +0.2 1.3 hypothetical protein compare
MMJJ_RS05505 +0.2 1.9 hypothetical protein compare
MMJJ_RS00320 +0.2 1.0 chemotaxis protein CheD compare
MMJJ_RS05500 +0.2 1.8 hypothetical protein compare
MMJJ_RS08350 +0.2 1.7 heavy metal translocating P-type ATPase compare
MMJJ_RS07830 +0.2 1.3 DUF1786 domain-containing protein compare
MMJJ_RS02965 +0.2 1.4 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMJJ_RS08455 +0.2 0.9 tetratricopeptide repeat protein compare
MMJJ_RS06290 +0.2 1.0 DUF749 domain-containing protein compare
MMJJ_RS04610 +0.2 1.0 ribosome assembly RNA-binding protein YhbY compare
MMJJ_RS05335 +0.2 1.0 heavy metal-binding domain-containing protein compare
MMJJ_RS01825 +0.2 1.3 DNA repair and recombination protein RadB compare
MMJJ_RS02355 +0.2 1.4 DUF2798 domain-containing protein compare
MMJJ_RS08525 +0.2 0.8 peptidylprolyl isomerase compare
MMJJ_RS04350 +0.2 1.0 hypothetical protein compare
MMJJ_RS01955 +0.2 1.6 hypothetical protein compare
MMJJ_RS04825 +0.2 1.5 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MMJJ_RS02160 +0.2 1.2 amino acid ABC transporter permease compare
MMJJ_RS04850 +0.2 1.1 energy-coupling factor transporter transmembrane protein EcfT compare
MMJJ_RS04500 +0.2 1.2 hypothetical protein compare
MMJJ_RS07865 +0.2 1.0 zinc ribbon domain-containing protein compare
MMJJ_RS04510 +0.2 1.4 hypothetical protein compare
MMJJ_RS00635 +0.2 1.3 ABC transporter permease subunit compare
MMJJ_RS03450 +0.2 1.0 hypothetical protein compare
MMJJ_RS07740 +0.2 1.3 DUF2334 domain-containing protein compare
MMJJ_RS08285 +0.2 1.3 class I SAM-dependent methyltransferase compare
MMJJ_RS00395 +0.2 1.0 DUF473 domain-containing protein compare
MMJJ_RS05525 +0.2 1.1 GTP-binding protein compare
MMJJ_RS00640 +0.2 1.4 glycine betaine ABC transporter substrate-binding protein compare
MMJJ_RS01300 +0.2 1.3 MarR family transcriptional regulator compare
MMJJ_RS00500 +0.2 0.7 GNAT family N-acetyltransferase compare
MMJJ_RS07215 +0.2 1.4 TIGR00341 family protein compare
MMJJ_RS07480 +0.2 1.4 FAD-dependent oxidoreductase compare
MMJJ_RS06080 +0.2 1.2 serine/threonine protein kinase compare
MMJJ_RS00615 +0.2 0.8 nucleoside deaminase compare
MMJJ_RS06455 +0.2 1.3 YeeE/YedE family protein compare
MMJJ_RS03445 +0.2 0.8 hypothetical protein compare
MMJJ_RS07200 +0.2 1.3 MFS transporter compare
MMJJ_RS05390 +0.2 1.2 tRNA pseudouridine(13) synthase TruD compare
MMJJ_RS07685 +0.2 1.4 glycogen/starch synthase compare
MMJJ_RS05605 +0.2 0.7 hypothetical protein compare
MMJJ_RS09300 +0.2 0.4 hypothetical protein compare
MMJJ_RS05355 +0.2 1.1 DUF2121 domain-containing protein compare
MMJJ_RS06210 +0.2 0.9 hypothetical protein compare
MMJJ_RS05690 +0.2 1.5 hypothetical protein compare
MMJJ_RS05940 +0.2 1.2 HAD family hydrolase compare
MMJJ_RS06520 +0.2 1.2 TldD/PmbA family protein compare
MMJJ_RS04135 +0.2 0.6 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS07915 +0.2 1.0 CBS domain-containing protein compare
MMJJ_RS03575 +0.2 0.9 NUDIX hydrolase compare
MMJJ_RS08210 +0.2 1.5 hypothetical protein compare
MMJJ_RS04635 +0.2 0.9 DUF367 family protein compare
MMJJ_RS01210 +0.2 0.4 hypothetical protein compare
MMJJ_RS03040 +0.2 1.1 lactate utilization protein compare
MMJJ_RS05785 +0.2 1.0 flagellin compare
MMJJ_RS04550 +0.2 1.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS08665 +0.2 1.3 transcriptional regulator compare
MMJJ_RS06590 +0.1 1.2 sodium:alanine symporter family protein compare
MMJJ_RS01070 +0.1 0.4 PadR family transcriptional regulator compare
MMJJ_RS07695 +0.1 1.3 glycoside hydrolase family 15 protein compare
MMJJ_RS05665 +0.1 1.1 hypothetical protein compare
MMJJ_RS06085 +0.1 0.7 proteasome assembly chaperone family protein compare
MMJJ_RS06580 +0.1 1.1 alanine dehydrogenase compare
MMJJ_RS04725 +0.1 1.1 branched-chain-amino-acid transaminase compare
MMJJ_RS00885 +0.1 0.7 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS06555 +0.1 1.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS03305 +0.1 1.1 zincin-like metallopeptidase domain-containing protein compare
MMJJ_RS07175 +0.1 1.1 DEAD/DEAH box helicase compare
MMJJ_RS05990 +0.1 0.9 phosphatase PAP2 family protein compare
MMJJ_RS06130 +0.1 0.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments