Experiment set3IT062 for Burkholderia phytofirmans PsJN

Compare to:

L-Glutamine nitrogen source

200 most important genes:

  gene name fitness t score description  
BPHYT_RS33835 -7.7 -5.3 O-succinylhomoserine sulfhydrylase compare
BPHYT_RS13705 -7.7 -5.3 chorismate synthase compare
BPHYT_RS17680 -7.5 -5.0 imidazole glycerol phosphate synthase subunit HisF compare
BPHYT_RS33900 -7.4 -7.2 3-isopropylmalate dehydrogenase compare
BPHYT_RS06555 -7.3 -7.1 ketol-acid reductoisomerase compare
BPHYT_RS18320 -7.2 -11.0 orotate phosphoribosyltransferase compare
BPHYT_RS17675 -7.2 -2.4 phosphoribosyl-AMP cyclohydrolase compare
BPHYT_RS14845 -7.2 -5.0 cysteine synthase compare
BPHYT_RS14910 -7.2 -12.0 chorismate mutase compare
BPHYT_RS17685 -7.0 -6.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BPHYT_RS14915 -6.8 -8.1 phosphoserine aminotransferase compare
BPHYT_RS33880 -6.8 -8.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
BPHYT_RS15920 -6.7 -9.2 argininosuccinate synthase compare
BPHYT_RS33875 -6.7 -10.2 tryptophan synthase subunit alpha compare
BPHYT_RS17690 -6.5 -12.9 imidazole glycerol phosphate synthase compare
BPHYT_RS04965 -6.5 -7.8 ATP-binding protein compare
BPHYT_RS01590 -6.5 -5.0 methionine biosynthesis protein MetW compare
BPHYT_RS17395 -6.5 -2.2 anthranilate synthase subunit II compare
BPHYT_RS17890 -6.3 -3.7 shikimate kinase compare
BPHYT_RS06545 -6.3 -11.3 acetolactate synthase compare
BPHYT_RS15915 -6.3 -9.6 ornithine carbamoyltransferase compare
BPHYT_RS12985 -6.1 -3.9 amino acid acetyltransferase compare
BPHYT_RS10100 -6.1 -4.2 dihydroxy-acid dehydratase compare
BPHYT_RS16245 -6.1 -5.9 phosphoribosylaminoimidazole carboxylase compare
BPHYT_RS33865 -6.0 -9.2 tryptophan synthase alpha chain compare
BPHYT_RS18705 -6.0 -3.4 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS04740 -6.0 -6.9 sulfate adenylyltransferase subunit 2 compare
BPHYT_RS03150 -5.9 -12.2 Phosphoglycerate dehydrogenase (EC:1.1.1.95) (from data) compare
BPHYT_RS33915 -5.8 -7.3 isopropylmalate isomerase compare
BPHYT_RS04725 -5.8 -8.3 sulfite reductase compare
BPHYT_RS17885 -5.7 -7.6 3-dehydroquinate synthase compare
BPHYT_RS08955 -5.7 -5.6 homoserine dehydrogenase compare
BPHYT_RS14895 -5.7 -5.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS02590 -5.5 -9.2 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS02610 -5.5 -4.0 glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
BPHYT_RS14855 -5.5 -3.2 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS05960 -5.5 -5.8 endoribonuclease L-PSP compare
BPHYT_RS09515 -5.4 -5.2 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS33645 -5.3 -5.2 homoserine kinase compare
BPHYT_RS17405 -5.3 -1.8 indole-3-glycerol phosphate synthase compare
BPHYT_RS17670 -5.3 -6.0 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
BPHYT_RS06405 -5.2 -6.5 phosphoribosylamine--glycine ligase compare
BPHYT_RS33840 -5.2 -8.8 amidophosphoribosyltransferase compare
BPHYT_RS16675 -5.2 -3.6 dihydroorotase compare
BPHYT_RS01595 -5.2 -10.3 homoserine O-acetyltransferase compare
BPHYT_RS03640 -5.2 -5.0 phosphoribosylformylglycinamidine cyclo-ligase compare
BPHYT_RS06900 -5.1 -5.6 aspartate aminotransferase compare
BPHYT_RS17390 -5.1 -13.7 anthranilate synthase subunit I compare
BPHYT_RS16905 -5.1 -7.7 orotidine 5'-phosphate decarboxylase compare
BPHYT_RS14190 -5.1 -10.4 carbamoyl phosphate synthase large subunit compare
BPHYT_RS17400 -4.8 -7.2 anthranilate phosphoribosyltransferase compare
BPHYT_RS16255 -4.7 -3.3 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS16840 -4.7 -4.6 transketolase compare
BPHYT_RS15670 -4.6 -10.5 phosphoribosylglycinamide formyltransferase compare
BPHYT_RS16835 -4.5 -6.5 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS06045 -4.5 -9.1 transaldolase compare
BPHYT_RS03725 -4.4 -2.4 serine hydroxymethyltransferase compare
BPHYT_RS12055 -4.3 -14.6 phosphoenolpyruvate synthase compare
BPHYT_RS17715 -4.2 -5.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
BPHYT_RS15620 -4.1 -6.0 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS14195 -4.1 -4.5 carbamoyl phosphate synthase small subunit compare
BPHYT_RS06610 -4.1 -3.1 triosephosphate isomerase compare
BPHYT_RS36275 -4.0 -6.1 hypothetical protein compare
BPHYT_RS12845 -4.0 -17.5 ATPase compare
BPHYT_RS03535 -3.9 -7.3 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BPHYT_RS16735 -3.8 -3.9 phosphogluconate dehydratase compare
BPHYT_RS12530 -3.8 -3.7 ATP phosphoribosyltransferase regulatory subunit compare
BPHYT_RS09500 -3.7 -8.9 glucose-6-phosphate isomerase compare
BPHYT_RS13220 -3.7 -6.2 phosphomethylpyrimidine synthase compare
BPHYT_RS03625 -3.6 -11.4 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS02165 -3.6 -10.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
BPHYT_RS04720 -3.5 -3.9 transcriptional regulator compare
BPHYT_RS16270 -3.4 -5.6 phosphoglycerate kinase compare
BPHYT_RS17700 -3.3 -2.8 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (from data) compare
BPHYT_RS08960 -3.3 -2.6 threonine synthase compare
BPHYT_RS03495 -3.0 -5.4 hypothetical protein compare
BPHYT_RS04730 -3.0 -3.5 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
BPHYT_RS17855 -3.0 -16.0 glutamate synthase compare
BPHYT_RS02865 -3.0 -5.0 hypothetical protein compare
BPHYT_RS08565 -3.0 -1.2 dihydroorotate dehydrogenase compare
BPHYT_RS17520 -3.0 -5.7 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS02150 -2.9 -4.7 biotin synthase compare
BPHYT_RS03645 -2.9 -4.0 tRNA dimethylallyltransferase compare
BPHYT_RS16975 -2.9 -7.0 shikimate 5-dehydrogenase compare
BPHYT_RS04745 -2.9 -3.9 sulfate adenylyltransferase compare
BPHYT_RS05010 -2.7 -6.4 RpiR family transcriptional regulator compare
BPHYT_RS05030 -2.6 -4.0 sugar ABC transporter permease compare
BPHYT_RS04890 -2.6 -2.3 cobalamin biosynthesis protein CobD compare
BPHYT_RS06685 -2.6 -2.5 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS33920 -2.6 -8.6 type II citrate synthase compare
BPHYT_RS04820 -2.5 -5.6 LysR family transcriptional regulator compare
BPHYT_RS17095 -2.5 -4.4 proline--tRNA ligase compare
BPHYT_RS06990 -2.5 -2.1 membrane protein compare
BPHYT_RS02160 -2.4 -4.4 8-amino-7-oxononanoate synthase compare
BPHYT_RS12840 -2.4 -5.3 pyruvate dehydrogenase compare
BPHYT_RS12465 -2.3 -2.9 inositol monophosphatase compare
BPHYT_RS18340 -2.3 -2.6 n-acetyl-gamma-glutamyl-phosphate reductase compare
BPHYT_RS02155 -2.3 -5.2 dithiobiotin synthetase compare
BPHYT_RS02285 -2.3 -7.7 cell division protein compare
BPHYT_RS14865 -2.3 -3.1 UDP-glucose 6-dehydrogenase compare
BPHYT_RS01485 -2.2 -1.2 histidine kinase compare
BPHYT_RS05215 -2.1 -7.8 DNA-binding protein compare
BPHYT_RS07325 -2.1 -1.6 GntR family transcriptional regulator compare
BPHYT_RS15075 -2.1 -3.7 dihydrokaempferol 4-reductase compare
BPHYT_RS14900 -2.0 -3.2 prephenate dehydrogenase compare
BPHYT_RS15615 -2.0 -4.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase compare
BPHYT_RS04095 -2.0 -2.2 SAM-dependent methyltransferase PhcB compare
BPHYT_RS02650 -1.9 -1.9 membrane protein compare
BPHYT_RS04920 -1.9 -2.2 aspartate 1-decarboxylase compare
BPHYT_RS01685 -1.9 -7.9 phytanoyl-CoA dioxygenase compare
BPHYT_RS08950 -1.8 -4.1 aminotransferase compare
BPHYT_RS05020 -1.8 -5.4 glucose-6-phosphate 1-dehydrogenase compare
BPHYT_RS06985 -1.8 -7.6 fumarate hydratase compare
BPHYT_RS12725 -1.8 -10.6 regulator compare
BPHYT_RS05040 -1.7 -3.9 sugar ABC transporter ATPase compare
BPHYT_RS22910 -1.7 -1.5 hypothetical protein compare
BPHYT_RS15415 -1.7 -10.5 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS17380 -1.7 -8.9 ribulose-phosphate 3-epimerase compare
BPHYT_RS12280 -1.7 -2.0 RNA helicase compare
BPHYT_RS26685 -1.6 -1.9 precorrin-8X methylmutase compare
BPHYT_RS02975 -1.6 -3.3 membrane protein compare
BPHYT_RS14400 -1.6 -3.3 anti-sigma factor compare
BPHYT_RS05035 -1.6 -5.4 sugar ABC transporter permease compare
BPHYT_RS22835 -1.5 -1.6 flagellar motor protein MotA compare
BPHYT_RS17530 -1.5 -4.4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS14550 -1.5 -1.4 tRNA-Asn compare
BPHYT_RS33905 -1.4 -0.8 3-isopropylmalate dehydratase small subunit compare
BPHYT_RS17945 -1.4 -1.8 cytochrome C biogenesis protein compare
BPHYT_RS06530 -1.4 -1.9 membrane protein compare
BPHYT_RS17100 -1.4 -6.4 RNA pyrophosphohydrolase compare
BPHYT_RS27295 -1.4 -1.5 hypothetical protein compare
BPHYT_RS13645 -1.4 -10.7 threonine--tRNA ligase compare
BPHYT_RS02310 -1.4 -8.1 5-methyltetrahydrofolate--homocysteine methyltransferase compare
BPHYT_RS25935 -1.4 -2.3 type III secretion protein compare
BPHYT_RS30890 -1.4 -1.7 hypothetical protein compare
BPHYT_RS19680 -1.4 -9.8 glutamate--cysteine ligase compare
BPHYT_RS03400 -1.4 -1.5 ATP-dependent DNA helicase RecG compare
BPHYT_RS10645 -1.4 -1.7 cyanate hydratase compare
BPHYT_RS33580 -1.4 -3.5 geranyltranstransferase compare
BPHYT_RS08645 -1.3 -2.4 sulfonate ABC transporter compare
BPHYT_RS02435 -1.3 -1.3 hypothetical protein compare
BPHYT_RS22260 -1.3 -2.0 hypothetical protein compare
BPHYT_RS02955 -1.3 -7.9 formyltetrahydrofolate deformylase compare
BPHYT_RS04955 -1.3 -1.6 methionyl-tRNA synthetase compare
BPHYT_RS17240 -1.3 -1.5 cell division protein FtsW compare
BPHYT_RS28830 -1.3 -1.4 LysR family transcriptional regulator compare
BPHYT_RS16435 -1.3 -9.1 alcohol dehydrogenase compare
BPHYT_RS15320 -1.3 -1.9 hypothetical protein compare
BPHYT_RS20070 -1.3 -2.9 hypothetical protein compare
BPHYT_RS23475 -1.3 -1.9 luciferase compare
BPHYT_RS17760 -1.3 -3.0 ABC transporter permease compare
BPHYT_RS01505 -1.3 -1.7 7-cyano-7-deazaguanine reductase compare
BPHYT_RS27175 -1.3 -1.0 DNA-binding protein compare
BPHYT_RS36385 -1.3 -1.4 TetR family transcriptional regulator compare
BPHYT_RS02305 -1.3 -6.9 methionine synthase compare
BPHYT_RS05025 -1.3 -3.7 sugar ABC transporter substrate-binding protein compare
BPHYT_RS12615 -1.3 -1.5 dihydrodipicolinate synthase compare
BPHYT_RS11765 -1.3 -1.1 polyamine ABC transporter permease compare
BPHYT_RS15650 -1.2 -8.0 quinolinate synthetase compare
BPHYT_RS24315 -1.2 -2.5 phosphoribosyltransferase compare
BPHYT_RS06550 -1.2 -3.0 acetolactate synthase compare
BPHYT_RS29620 -1.2 -1.0 hypothetical protein compare
BPHYT_RS23840 -1.2 -3.7 methyltransferase compare
BPHYT_RS16430 -1.2 -8.4 cytochrome C compare
BPHYT_RS26025 -1.2 -1.0 hypothetical protein compare
BPHYT_RS15710 -1.2 -2.7 ATP-dependent Clp protease ATP-binding protein compare
BPHYT_RS35885 -1.2 -2.4 hypothetical protein compare
BPHYT_RS25780 -1.2 -1.3 DeoR faimly transcriptional regulator compare
BPHYT_RS26680 -1.2 -3.1 oxidoreductase compare
BPHYT_RS08125 -1.2 -7.4 ATPase compare
BPHYT_RS02525 -1.2 -5.9 membrane protein compare
BPHYT_RS26080 -1.1 -1.5 ABC transporter ATPase compare
BPHYT_RS14395 -1.1 -3.7 sugar dehydratase compare
BPHYT_RS02660 -1.1 -1.1 membrane protein compare
BPHYT_RS06065 -1.1 -5.6 cytochrome C compare
BPHYT_RS08060 -1.1 -4.2 ribosome maturation factor RimP compare
BPHYT_RS10340 -1.1 -3.5 sensor protein Chase2 compare
BPHYT_RS14920 -1.1 -1.0 hypothetical protein compare
BPHYT_RS06410 -1.1 -1.4 transcriptional regulator compare
BPHYT_RS29720 -1.1 -1.0 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS02690 -1.1 -5.9 protoheme IX farnesyltransferase compare
BPHYT_RS19985 -1.1 -1.1 CoA-transferase compare
BPHYT_RS30010 -1.1 -1.6 cell division protein compare
BPHYT_RS23230 -1.1 -0.9 histidine kinase compare
BPHYT_RS25980 -1.0 -1.0 urea carboxylase compare
BPHYT_RS09330 -1.0 -6.5 phytoene synthase compare
BPHYT_RS26660 -1.0 -3.0 precorrin-4 C11-methyltransferase compare
BPHYT_RS08130 -1.0 -1.4 transposase compare
BPHYT_RS08945 -1.0 -6.4 hypothetical protein compare
BPHYT_RS04340 -1.0 -3.4 hypothetical protein compare
BPHYT_RS03570 -1.0 -4.0 heat-inducible transcription repressor HrcA compare
BPHYT_RS23155 -1.0 -1.1 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) compare
BPHYT_RS16135 -1.0 -3.9 ABC transporter ATP-binding protein compare
BPHYT_RS09480 -1.0 -0.8 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS17525 -1.0 -1.9 glutaredoxin compare
BPHYT_RS32525 -1.0 -1.1 hypothetical protein compare
BPHYT_RS19305 -1.0 -5.0 ATP-dependent DNA helicase Rep compare
BPHYT_RS08685 -1.0 -2.6 hypothetical protein compare
BPHYT_RS06400 -1.0 -2.8 oxygen-dependent coproporphyrinogen-III oxidase compare
BPHYT_RS26675 -1.0 -1.7 precorrin-6Y C5,15-methyltransferase compare


Specific Phenotypes

For 4 genes in this experiment

For nitrogen source L-Glutamine in Burkholderia phytofirmans PsJN

For nitrogen source L-Glutamine across organisms