Experiment set3IT060 for Pseudomonas fluorescens FW300-N2E3

Compare to:

LB with Sodium perchlorate monohydrate 75 mM

200 most important genes:

  gene name fitness t score description  
AO353_15900 -2.9 -3.4 GTP-binding protein compare
AO353_13130 -2.7 -5.1 N-acetylmuramoyl-L-alanine amidase compare
AO353_02440 -2.7 -11.0 peptidase S41 compare
AO353_15905 -2.6 -6.3 outer membrane protein assembly factor BamB compare
AO353_06040 -2.6 -4.2 exodeoxyribonuclease V subunit alpha compare
AO353_06455 -2.3 -3.4 D-alanyl-D-alanine carboxypeptidase compare
AO353_22685 -2.3 -2.7 peroxidase compare
AO353_11750 -2.3 -3.1 ATPase compare
AO353_00330 -2.2 -7.9 hypothetical protein compare
AO353_18715 -2.2 -2.0 histidine kinase compare
AO353_10950 -2.1 -10.5 thiol:disulfide interchange protein compare
AO353_05690 -2.1 -3.7 SsrA-binding protein compare
AO353_01990 -2.1 -6.3 UDP-N-acetylglucosamine 2-epimerase compare
AO353_14475 -2.1 -14.4 penicillin-binding protein 1B conserved
AO353_10320 -2.0 -2.7 hypothetical protein compare
AO353_01975 -2.0 -6.0 glycosyl transferase compare
AO353_19770 -2.0 -2.5 peptidase compare
AO353_16825 -2.0 -5.6 hypothetical protein compare
AO353_05465 -2.0 -12.6 flavodoxin compare
AO353_03590 -1.9 -3.6 crossover junction endodeoxyribonuclease RuvC compare
AO353_12105 -1.9 -5.9 peptidase S41 compare
AO353_04055 -1.9 -2.5 methionine--tRNA ligase compare
AO353_17675 -1.9 -5.3 hypothetical protein compare
AO353_02940 -1.9 -3.3 DNA-binding protein compare
AO353_04565 -1.8 -5.6 nucleoid-associated protein compare
AO353_08115 -1.8 -5.3 energy transducer TonB compare
AO353_04220 -1.8 -6.0 chemotaxis protein CheY compare
AO353_18780 -1.8 -6.7 cobyrinic acid a,c-diamide synthase compare
AO353_02480 -1.8 -7.8 peptidylprolyl isomerase compare
AO353_05135 -1.8 -8.0 toluene tolerance protein compare
AO353_18775 -1.8 -6.1 flagellar biosynthesis protein FlhF compare
AO353_01995 -1.7 -9.9 hypothetical protein compare
AO353_01985 -1.7 -7.1 hypothetical protein compare
AO353_05145 -1.7 -5.3 ABC transporter permease compare
AO353_25640 -1.7 -2.5 AsnC family transcriptional regulator compare
AO353_15445 -1.7 -3.8 disulfide bond formation protein B compare
AO353_06415 -1.7 -4.7 hypothetical protein compare
AO353_14775 -1.7 -5.4 hypothetical protein compare
AO353_07315 -1.6 -2.5 rRNA methyltransferase compare
AO353_10930 -1.6 -7.0 DNA polymerase I compare
AO353_12110 -1.5 -7.2 peptidase M23 compare
AO353_00825 -1.5 -3.0 porin compare
AO353_06365 -1.5 -9.0 hypothetical protein compare
AO353_20200 -1.5 -4.0 peptidylprolyl isomerase compare
AO353_06045 -1.5 -6.3 exodeoxyribonuclease V subunit beta compare
AO353_19250 -1.5 -2.4 molybdenum cofactor guanylyltransferase compare
AO353_27855 -1.5 -2.4 MarR family transcriptional regulator compare
AO353_09235 -1.5 -6.3 phosphoglucomutase compare
AO353_14480 -1.5 -7.6 hypothetical protein compare
AO353_27500 -1.5 -2.4 hypothetical protein compare
AO353_02010 -1.5 -5.0 glycosyl transferase family 1 compare
AO353_05140 -1.5 -6.3 outer membrane lipid asymmetry maintenance protein MlaD compare
AO353_20185 -1.4 -4.7 DNA-binding protein compare
AO353_02015 -1.4 -5.6 acetyltransferase compare
AO353_16495 -1.4 -4.0 zinc metallopeptidase RseP compare
AO353_18540 -1.4 -2.2 pseudouridine synthase compare
AO353_19530 -1.4 -1.6 quinohemoprotein amine dehydrogenase compare
AO353_10055 -1.4 -8.8 DNA helicase II compare
AO353_17640 -1.3 -2.1 serine peptidase compare
AO353_02100 -1.3 -3.2 phosphoglycolate phosphatase compare
AO353_21630 -1.3 -2.2 precorrin-4 C11-methyltransferase compare
AO353_12690 -1.3 -1.1 acyl carrier protein compare
AO353_08245 -1.3 -3.1 cell division ATP-binding protein FtsE compare
AO353_17625 -1.3 -6.8 RNA polymerase subunit sigma compare
AO353_02020 -1.3 -3.8 hypothetical protein compare
AO353_10995 -1.3 -7.6 hypothetical protein compare
AO353_05150 -1.3 -3.7 ABC transporter ATP-binding protein compare
AO353_14225 -1.3 -7.1 laccase compare
AO353_13100 -1.3 -1.4 GTPase RsgA compare
AO353_09115 -1.3 -6.2 diguanylate cyclase compare
AO353_01355 -1.3 -5.5 3-oxoacyl-ACP synthase compare
AO353_17975 -1.3 -5.0 arabinose ABC transporter permease compare
AO353_20860 -1.3 -2.6 hypothetical protein compare
AO353_16925 -1.3 -9.5 AmpG family muropeptide MFS transporter compare
AO353_02025 -1.2 -6.8 mannose-1-phosphate guanyltransferase compare
AO353_24745 -1.2 -1.4 hypothetical protein compare
AO353_07645 -1.2 -1.6 sarcosine oxidase subunit gamma compare
AO353_01220 -1.2 -1.5 hypothetical protein compare
AO353_08980 -1.2 -2.6 heme biosynthesis operon protein HemX compare
AO353_25660 -1.2 -2.6 ABC transporter substrate-binding protein compare
AO353_01970 -1.2 -6.5 hypothetical protein compare
AO353_09905 -1.2 -5.4 phosphate-binding protein compare
AO353_15270 -1.2 -3.3 phospholipid-binding protein compare
AO353_02280 -1.2 -1.7 DNA mismatch repair protein MutS compare
AO353_05130 -1.2 -1.5 anti-anti-sigma factor compare
AO353_18285 -1.2 -2.3 3-phosphoglycerate kinase compare
AO353_25335 -1.2 -1.4 malonate decarboxylase acyl carrier protein compare
AO353_00455 -1.2 -2.5 beta-hexosaminidase compare
AO353_03580 -1.1 -2.7 ATP-dependent DNA helicase RuvB compare
AO353_18925 -1.1 -2.2 ATPase compare
AO353_08240 -1.1 -8.6 cell division protein FtsX compare
AO353_20910 -1.1 -3.8 MerR family transcriptional regulator compare
AO353_01410 -1.1 -2.9 ribonuclease E compare
AO353_03100 -1.1 -1.9 XRE family transcriptional regulator compare
AO353_27720 -1.1 -3.4 cupin compare
AO353_08350 -1.1 -5.4 hypothetical protein compare
AO353_15660 -1.1 -3.2 hypothetical protein compare
AO353_27650 -1.1 -2.9 cell division protein FtsK compare
AO353_25990 -1.1 -4.0 aspartyl beta-hydroxylase compare
AO353_23860 -1.1 -2.6 xanthine permease XanP compare
AO353_01980 -1.0 -6.6 NAD-dependent dehydratase compare
AO353_05240 -1.0 -2.2 rod shape-determining protein MreD compare
AO353_13640 -1.0 -3.2 histidine kinase compare
AO353_09720 -1.0 -1.1 hypothetical protein compare
AO353_08260 -1.0 -6.2 peptidase M16 compare
AO353_14220 -1.0 -1.3 ribosomal large subunit pseudouridine synthase D compare
AO353_06050 -1.0 -4.6 exodeoxyribonuclease V subunit gamma compare
AO353_07290 -1.0 -5.8 mannose-1-phosphate guanylyltransferase compare
AO353_16915 -1.0 -6.1 hypothetical protein compare
AO353_10445 -1.0 -1.6 tRNA uridine 5-carboxymethylaminomethyl modification protein compare
AO353_08265 -1.0 -3.7 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
AO353_09885 -1.0 -2.1 transcriptional regulator PhoU compare
AO353_15875 -1.0 -2.9 23S rRNA (adenine(2503)-C2)-methyltransferase compare
AO353_25305 -1.0 -2.9 malonate transporter compare
AO353_19295 -1.0 -2.1 hypothetical protein compare
AO353_26055 -1.0 -1.7 hypothetical protein compare
AO353_25845 -1.0 -1.9 GNAT family acetyltransferase compare
AO353_26810 -1.0 -2.7 (2Fe-2S)-binding protein compare
AO353_12935 -1.0 -3.2 glycosyltransferase compare
AO353_11775 -0.9 -4.8 phosphoenolpyruvate carboxykinase [ATP] compare
AO353_06750 -0.9 -2.8 methionine ABC transporter ATP-binding protein compare
AO353_09320 -0.9 -5.4 ATP-dependent DNA helicase RecG compare
AO353_15280 -0.9 -3.6 hypothetical protein compare
AO353_15290 -0.9 -4.3 methyltransferase compare
AO353_03410 -0.9 -1.8 chemotaxis protein CheY compare
AO353_16805 -0.9 -3.5 recombinase RecA compare
AO353_07295 -0.9 -6.4 aminoglycoside phosphotransferase compare
AO353_20585 -0.9 -1.7 TetR family transcriptional regulator compare
AO353_15640 -0.9 -2.3 acetylornithine aminotransferase compare
AO353_15265 -0.9 -3.5 peptidase compare
AO353_07935 -0.9 -2.9 hypothetical protein compare
AO353_10630 -0.9 -3.5 16S rRNA methyltransferase compare
AO353_08535 -0.9 -5.3 hypothetical protein compare
AO353_18660 -0.9 -5.0 AAA family ATPase compare
AO353_26680 -0.9 -2.6 hypothetical protein compare
AO353_14975 -0.9 -3.4 hypothetical protein compare
AO353_03585 -0.9 -1.7 ATP-dependent DNA helicase RuvA compare
AO353_13600 -0.9 -2.8 precorrin-6Y C5,15-methyltransferase compare
AO353_08255 -0.9 -6.2 peptidase M16 compare
AO353_07145 -0.9 -6.1 anhydro-N-acetylmuramic acid kinase compare
AO353_09745 -0.9 -1.5 hypothetical protein compare
AO353_27015 -0.9 -3.1 6-O-methylguanine DNA methyltransferase compare
AO353_17970 -0.9 -6.5 hypothetical protein compare
AO353_18510 -0.9 -2.1 hypothetical protein compare
AO353_02000 -0.8 -2.2 polysaccharide/polyol phosphate ABC transporter ATP-binding protein compare
AO353_12650 -0.8 -1.1 hypothetical protein compare
AO353_19605 -0.8 -1.4 hypothetical protein compare
AO353_23020 -0.8 -2.9 hypothetical protein compare
AO353_22870 -0.8 -2.2 oxidoreductase compare
AO353_19195 -0.8 -2.8 response regulator compare
AO353_00510 -0.8 -3.1 multifunctional fatty acid oxidation complex subunit alpha compare
AO353_20255 -0.8 -1.8 transcriptional regulator compare
AO353_17645 -0.8 -5.3 peptidase M48 compare
AO353_04940 -0.8 -3.3 hypothetical protein compare
AO353_13740 -0.8 -2.9 MFS transporter compare
AO353_18655 -0.8 -2.1 flagellar assembly protein FliT compare
AO353_11485 -0.8 -2.7 hypothetical protein compare
AO353_28210 -0.8 -1.8 2-haloalkanoic acid dehalogenase compare
AO353_12790 -0.8 -1.7 hypothetical protein compare
AO353_16095 -0.8 -4.6 fimbrial assembly protein compare
AO353_26990 -0.8 -2.0 hypothetical protein compare
AO353_26285 -0.8 -1.0 hypothetical protein compare
AO353_26415 -0.8 -2.3 hypothetical protein compare
AO353_17720 -0.8 -3.3 ABC transporter substrate-binding protein compare
AO353_08620 -0.8 -1.6 hypothetical protein compare
AO353_19565 -0.8 -1.5 vanillate O-demethylase oxidoreductase VanB compare
AO353_27415 -0.8 -1.6 hypothetical protein compare
AO353_15170 -0.8 -1.7 cytochrome D ubiquinol oxidase subunit III compare
AO353_00480 -0.8 -2.8 hypothetical protein compare
AO353_27090 -0.8 -1.4 hypothetical protein compare
AO353_13985 -0.8 -2.4 pilus assembly protein compare
AO353_16810 -0.8 -2.2 recombinase RecX compare
AO353_07140 -0.8 -6.3 peptidase M23 compare
AO353_01375 -0.8 -3.1 phosphate acyltransferase compare
AO353_12840 -0.7 -3.6 lactate dehydrogenase compare
AO353_12510 -0.7 -5.0 cell division protein compare
AO353_27725 -0.7 -1.6 GNAT family acetyltransferase compare
AO353_02590 -0.7 -1.7 MarR family transcriptional regulator compare
AO353_27585 -0.7 -1.4 DNA repair protein compare
AO353_22190 -0.7 -3.3 methionine ABC transporter ATP-binding protein compare
AO353_26520 -0.7 -1.7 TetR family transcriptional regulator compare
AO353_28235 -0.7 -2.7 acetylornithine deacetylase compare
AO353_01780 -0.7 -4.6 heat-shock protein Hsp90 compare
AO353_29015 -0.7 -2.5 ABC transporter substrate-binding protein compare
AO353_27460 -0.7 -1.8 hypothetical protein compare
AO353_16855 -0.7 -1.9 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA compare
AO353_16345 -0.7 -1.4 energy transducer TonB compare
AO353_01785 -0.7 -2.2 thioesterase compare
AO353_18135 -0.7 -1.0 hypothetical protein compare
AO353_03575 -0.7 -3.5 4-hydroxybenzoyl-CoA thioesterase compare
AO353_04900 -0.7 -3.3 energy transducer TonB compare
AO353_14420 -0.7 -1.9 molecular chaperone DnaK compare
AO353_20980 -0.7 -1.7 hypothetical protein compare
AO353_03815 -0.7 -1.1 heme utilization protein compare
AO353_10825 -0.7 -5.2 hypothetical protein compare
AO353_04135 -0.7 -3.4 bacterioferritin compare
AO353_13020 -0.7 -4.8 hypothetical protein compare
AO353_08735 -0.7 -4.6 glycine cleavage system protein T compare
AO353_19170 -0.7 -4.1 histidine kinase compare
AO353_05090 -0.7 -3.1 2-alkenal reductase compare


Specific Phenotypes

For 16 genes in this experiment

For stress Sodium perchlorate monohydrate in Pseudomonas fluorescens FW300-N2E3

For stress Sodium perchlorate monohydrate across organisms