Experiment set3IT060 for Methanococcus maripaludis JJ

Compare to:

formate McAA p-aminobenzoic acid dropout

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +3.1 20.6 hypothetical protein compare
MMJJ_RS08830 +0.9 3.1 hypothetical protein compare
MMJJ_RS04005 +0.9 6.8 acetate--CoA ligase family protein compare
MMJJ_RS06505 +0.7 2.4 prephenate dehydratase compare
MMJJ_RS07935 +0.7 0.7 protein fwdD compare
MMJJ_RS04955 +0.6 3.7 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS03725 +0.6 2.0 sulfurtransferase TusA family protein compare
MMJJ_RS07220 +0.6 4.7 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS06675 +0.6 4.4 TIGR01212 family radical SAM protein compare
MMJJ_RS06800 +0.6 2.9 prefoldin subunit alpha compare
MMJJ_RS01785 +0.6 1.0 50S ribosomal protein L14e compare
MMJJ_RS06540 +0.6 1.9 DUF2120 domain-containing protein compare
MMJJ_RS07235 +0.5 4.5 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS08410 +0.5 1.3 CBS domain-containing protein compare
MMJJ_RS06210 +0.5 2.8 hypothetical protein compare
MMJJ_RS07920 +0.5 3.6 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS05770 +0.5 1.0 flagellar protein D compare
MMJJ_RS07015 +0.5 0.6 PFL family protein compare
MMJJ_RS05530 +0.5 1.8 roadblock/LC7 domain-containing protein compare
MMJJ_RS07230 +0.5 3.0 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS07025 +0.5 2.6 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS05685 +0.5 3.0 class III signal peptide-containing protein compare
MMJJ_RS06500 +0.4 3.1 class I SAM-dependent methyltransferase compare
MMJJ_RS06090 +0.4 3.0 hypothetical protein compare
MMJJ_RS07225 +0.4 3.0 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS07240 +0.4 3.9 MBL fold metallo-hydrolase compare
MMJJ_RS06275 +0.4 2.3 hypothetical protein compare
MMJJ_RS06810 +0.4 3.3 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06745 +0.4 2.5 energy-coupling factor ABC transporter permease compare
MMJJ_RS06770 +0.4 3.4 hypothetical protein compare
MMJJ_RS03395 +0.4 1.3 hypothetical protein compare
MMJJ_RS00745 +0.4 2.1 hypothetical protein compare
MMJJ_RS03250 +0.4 1.2 DUF2116 family Zn-ribbon domain-containing protein compare
MMJJ_RS07260 +0.4 2.6 PspC domain-containing protein compare
MMJJ_RS06385 +0.4 1.7 hypothetical protein compare
MMJJ_RS06515 +0.4 2.9 ribonuclease III compare
MMJJ_RS03375 +0.4 1.8 hypothetical protein compare
MMJJ_RS04105 +0.4 3.2 prepilin peptidase compare
MMJJ_RS06190 +0.4 2.9 7-cyano-7-deazaguanine synthase compare
MMJJ_RS07740 +0.4 2.8 DUF2334 domain-containing protein compare
MMJJ_RS05390 +0.4 2.9 tRNA pseudouridine(13) synthase TruD compare
MMJJ_RS06710 +0.4 2.8 TldD/PmbA family protein compare
MMJJ_RS03850 +0.4 1.7 nucleoside-diphosphate kinase compare
MMJJ_RS06960 +0.4 3.1 CAP domain-containing protein compare
MMJJ_RS08165 +0.3 1.8 thermonuclease family protein compare
MMJJ_RS01825 +0.3 1.9 DNA repair and recombination protein RadB compare
MMJJ_RS01010 +0.3 3.2 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS06735 +0.3 2.5 cobalt ECF transporter T component CbiQ compare
MMJJ_RS00150 +0.3 1.8 DUF2180 family protein compare
MMJJ_RS03905 +0.3 2.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS08100 +0.3 1.9 hypothetical protein compare
MMJJ_RS04215 +0.3 2.8 DMT family transporter compare
MMJJ_RS07385 +0.3 2.3 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS06440 +0.3 2.3 DUF4870 domain-containing protein compare
MMJJ_RS02665 +0.3 0.8 methyl-accepting chemotaxis protein compare
MMJJ_RS06685 +0.3 2.9 S-layer protein compare
MMJJ_RS07800 +0.3 2.6 AMP-binding protein compare
MMJJ_RS05975 +0.3 2.1 sulfurtransferase TusA family protein compare
MMJJ_RS06120 +0.3 2.4 DUF4013 domain-containing protein compare
MMJJ_RS08935 +0.3 0.5 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS01855 +0.3 2.4 MBL fold metallo-hydrolase compare
MMJJ_RS07820 +0.3 2.5 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS06580 +0.3 2.5 alanine dehydrogenase compare
MMJJ_RS04345 +0.3 1.6 DUF2080 family transposase-associated protein compare
MMJJ_RS03775 +0.3 1.4 50S ribosomal protein L15e compare
MMJJ_RS07495 +0.3 2.3 4Fe-4S binding protein compare
MMJJ_RS05520 +0.3 2.4 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMJJ_RS08380 +0.3 0.9 hypothetical protein compare
MMJJ_RS06950 +0.3 2.0 4-demethylwyosine synthase TYW1 compare
MMJJ_RS07805 +0.3 1.5 ferredoxin family protein compare
MMJJ_RS05510 +0.3 2.2 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS04365 +0.3 1.7 helix-turn-helix transcriptional regulator compare
MMJJ_RS02270 +0.3 1.6 HEPN domain-containing protein compare
MMJJ_RS07795 +0.3 1.8 cupin domain-containing protein compare
MMJJ_RS06205 +0.3 2.1 EamA family transporter compare
MMJJ_RS09325 +0.3 1.6 hypothetical protein compare
MMJJ_RS07480 +0.3 2.3 FAD-dependent oxidoreductase compare
MMJJ_RS07210 +0.3 2.4 AmmeMemoRadiSam system protein B compare
MMJJ_RS06460 +0.3 1.8 cytochrome c compare
MMJJ_RS06680 +0.3 1.8 DUF366 family protein compare
MMJJ_RS02285 +0.3 1.0 class III signal peptide-containing protein compare
MMJJ_RS07760 +0.3 1.7 GNAT family N-acetyltransferase compare
MMJJ_RS04545 +0.3 0.9 PadR family transcriptional regulator compare
MMJJ_RS06100 +0.3 1.7 rubrerythrin compare
MMJJ_RS06585 +0.3 1.8 alanine racemase compare
MMJJ_RS05350 +0.3 1.2 DUF192 domain-containing protein compare
MMJJ_RS08880 +0.3 1.3 IMPACT family protein compare
MMJJ_RS05960 +0.3 1.9 DUF169 domain-containing protein compare
MMJJ_RS01140 +0.3 1.3 helix-turn-helix domain-containing protein compare
MMJJ_RS09065 +0.3 1.5 hypothetical protein compare
MMJJ_RS08375 +0.3 2.0 ferritin compare
MMJJ_RS08490 +0.3 1.0 rubrerythrin family protein compare
MMJJ_RS08015 +0.3 1.7 HAD family hydrolase compare
MMJJ_RS06640 +0.3 1.8 YfcE family phosphodiesterase compare
MMJJ_RS06665 +0.3 1.0 DUF3236 domain-containing protein compare
MMJJ_RS07445 +0.3 1.8 RlmF-related methyltransferase compare
MMJJ_RS07985 +0.3 1.2 hypothetical protein compare
MMJJ_RS06535 +0.3 2.1 UPF0104 family protein compare
MMJJ_RS07765 +0.3 1.3 DMT family protein compare
MMJJ_RS06765 +0.3 2.2 hypothetical protein compare
MMJJ_RS05605 +0.3 1.4 hypothetical protein compare
MMJJ_RS01970 +0.3 1.3 hypothetical protein compare
MMJJ_RS08400 +0.3 0.6 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS05580 +0.3 1.6 methanogenesis marker 9 domain-containing protein compare
MMJJ_RS07185 +0.3 0.8 DUF371 domain-containing protein compare
MMJJ_RS00155 +0.2 2.1 DUF2193 domain-containing protein compare
MMJJ_RS07810 +0.2 1.7 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS07205 +0.2 1.0 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS08515 +0.2 1.0 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS08130 +0.2 0.2 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS05915 +0.2 0.7 multiprotein bridging factor aMBF1 compare
MMJJ_RS07215 +0.2 1.9 TIGR00341 family protein compare
MMJJ_RS08520 +0.2 0.7 peptidylprolyl isomerase compare
MMJJ_RS06520 +0.2 1.8 TldD/PmbA family protein compare
MMJJ_RS04610 +0.2 1.1 ribosome assembly RNA-binding protein YhbY compare
MMJJ_RS04340 +0.2 0.6 hypothetical protein compare
MMJJ_RS07680 +0.2 1.6 glucose-6-phosphate isomerase compare
MMJJ_RS07905 +0.2 1.7 DUF89 domain-containing protein compare
MMJJ_RS09360 +0.2 1.5 hypothetical protein compare
MMJJ_RS06790 +0.2 1.8 nucleotidyltransferase family protein compare
MMJJ_RS07270 +0.2 1.5 ribonuclease HII compare
MMJJ_RS06470 +0.2 1.7 tripartite tricarboxylate transporter permease compare
MMJJ_RS01955 +0.2 1.9 hypothetical protein compare
MMJJ_RS04420 +0.2 1.7 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family compare
MMJJ_RS04300 +0.2 1.4 hypothetical protein compare
MMJJ_RS03515 +0.2 1.4 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS00320 +0.2 1.2 chemotaxis protein CheD compare
MMJJ_RS06055 +0.2 1.7 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS07200 +0.2 1.7 MFS transporter compare
MMJJ_RS02155 +0.2 1.6 DMT family transporter compare
MMJJ_RS06455 +0.2 1.7 YeeE/YedE family protein compare
MMJJ_RS05410 +0.2 1.4 RecB-family nuclease compare
MMJJ_RS08485 +0.2 1.0 Lrp/AsnC family transcriptional regulator compare
MMJJ_RS04635 +0.2 1.4 DUF367 family protein compare
MMJJ_RS03730 +0.2 1.1 SWIM zinc finger family protein compare
MMJJ_RS05500 +0.2 1.9 hypothetical protein compare
MMJJ_RS06550 +0.2 1.6 ABC transporter permease compare
MMJJ_RS09230 +0.2 0.8 hypothetical protein compare
MMJJ_RS04850 +0.2 1.3 energy-coupling factor transporter transmembrane protein EcfT compare
MMJJ_RS00100 +0.2 1.3 hypothetical protein compare
MMJJ_RS06430 +0.2 1.4 haloacid dehalogenase compare
MMJJ_RS00630 +0.2 1.3 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMJJ_RS01055 +0.2 1.0 hypothetical protein compare
MMJJ_RS07695 +0.2 1.7 glycoside hydrolase family 15 protein compare
MMJJ_RS06560 +0.2 1.5 site-2 protease family protein compare
MMJJ_RS05040 +0.2 1.4 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS09105 +0.2 1.6 AI-2E family transporter compare
MMJJ_RS04550 +0.2 1.3 ATP-binding cassette domain-containing protein compare
MMJJ_RS07255 +0.2 1.7 hypothetical protein compare
MMJJ_RS03690 +0.2 1.2 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS05700 +0.2 1.3 metallophosphoesterase compare
MMJJ_RS01745 +0.2 1.1 metal-dependent transcriptional regulator compare
MMJJ_RS06590 +0.2 1.6 sodium:alanine symporter family protein compare
MMJJ_RS06080 +0.2 1.4 serine/threonine protein kinase compare
MMJJ_RS03350 +0.2 0.4 hypothetical protein compare
MMJJ_RS01735 +0.2 1.3 rubrerythrin family protein compare
MMJJ_RS03380 +0.2 0.8 hypothetical protein compare
MMJJ_RS06555 +0.2 1.5 ATP-binding cassette domain-containing protein compare
MMJJ_RS05690 +0.2 1.8 hypothetical protein compare
MMJJ_RS06495 +0.2 0.5 hypothetical protein compare
MMJJ_RS09005 +0.2 1.7 N-6 DNA methylase compare
MMJJ_RS05750 +0.2 1.4 flagellar accessory protein FlaH compare
MMJJ_RS08285 +0.2 1.5 class I SAM-dependent methyltransferase compare
MMJJ_RS01035 +0.2 0.9 hypothetical protein compare
MMJJ_RS01590 +0.2 0.4 adenine phosphoribosyltransferase compare
MMJJ_RS06135 +0.2 1.4 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS01835 +0.2 1.4 tRNA pseudouridine(13) synthase TruD compare
MMJJ_RS01790 +0.2 1.3 pyridoxamine 5'-phosphate oxidase family protein compare
MMJJ_RS05695 +0.2 0.7 class III signal peptide-containing protein compare
MMJJ_RS03410 +0.2 0.6 hypothetical protein compare
MMJJ_RS07750 +0.2 0.5 class III signal peptide-containing protein compare
MMJJ_RS03290 +0.2 1.5 amidohydrolase compare
MMJJ_RS04500 +0.2 1.3 hypothetical protein compare
MMJJ_RS00400 +0.2 0.8 tautomerase family protein compare
MMJJ_RS07815 +0.2 1.2 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS09255 +0.2 0.5 hypothetical protein compare
MMJJ_RS08350 +0.2 1.5 heavy metal translocating P-type ATPase compare
MMJJ_RS00700 +0.2 1.0 P-II family nitrogen regulator compare
MMJJ_RS05660 +0.2 1.0 sulfopyruvate decarboxylase subunit beta compare
MMJJ_RS04390 +0.2 1.3 rhomboid family intramembrane serine protease compare
MMJJ_RS07010 +0.2 0.9 preprotein translocase subunit Sec61beta compare
MMJJ_RS07365 +0.2 1.3 CatB-related O-acetyltransferase compare
MMJJ_RS03720 +0.2 1.2 DsrE family protein compare
MMJJ_RS05505 +0.2 1.6 hypothetical protein compare
MMJJ_RS05970 +0.2 0.6 MJ0307 family thioredoxin compare
MMJJ_RS04625 +0.2 1.3 SLC13 family permease compare
MMJJ_RS05715 +0.2 1.3 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS05235 +0.2 1.4 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS04135 +0.2 0.8 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS07450 +0.2 0.7 hypothetical protein compare
MMJJ_RS08745 +0.2 1.3 glycosyltransferase family 9 protein compare
MMJJ_RS00555 +0.2 0.9 hypothetical protein compare
MMJJ_RS05665 +0.2 1.0 hypothetical protein compare
MMJJ_RS01715 +0.2 0.9 winged helix-turn-helix domain-containing protein compare
MMJJ_RS02115 +0.2 1.0 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS02950 +0.2 1.2 epoxyqueuosine reductase compare
MMJJ_RS00165 +0.2 1.1 F420-dependent thioredoxin reductase compare
MMJJ_RS06235 +0.2 1.2 IGHMBP2 family helicase compare
MMJJ_RS06740 +0.1 0.8 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS00145 +0.1 1.1 aquaporin family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments