Experiment set3IT059 for Dyella japonica UNC79MFTsu3.2

Compare to:

LB with Sodium Chloride 250 mM

200 most important genes:

  gene name fitness t score description  
ABZR86_RS06630 -8.0 -5.6 phosphopyruvate hydratase compare
ABZR86_RS13515 -6.5 -7.7 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
ABZR86_RS20775 -6.2 -6.0 TetR/AcrR family transcriptional regulator compare
ABZR86_RS10945 -5.7 -9.1 trehalose-phosphatase compare
ABZR86_RS09075 -5.2 -2.5 NrsF family protein compare
ABZR86_RS18545 -5.2 -12.2 hypothetical protein compare
ABZR86_RS18585 -4.9 -10.9 polysaccharide biosynthesis/export family protein compare
ABZR86_RS12005 -4.8 -3.3 ribose-5-phosphate isomerase RpiA compare
ABZR86_RS18490 -4.7 -6.4 low molecular weight protein-tyrosine-phosphatase compare
ABZR86_RS12885 -4.6 -3.2 magnesium-translocating P-type ATPase compare
ABZR86_RS06580 -4.6 -3.8 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR86_RS18495 -4.6 -13.7 polysaccharide biosynthesis tyrosine autokinase compare
ABZR86_RS18675 -4.3 -7.3 phosphoglycerate kinase compare
ABZR86_RS08015 -4.2 -2.8 tRNA pseudouridine(38-40) synthase TruA compare
ABZR86_RS07215 -3.8 -5.8 FKBP-type peptidyl-prolyl cis-trans isomerase compare
ABZR86_RS18615 -3.7 -4.4 type I glyceraldehyde-3-phosphate dehydrogenase compare
ABZR86_RS05550 -3.6 -4.9 lipopolysaccharide assembly protein LapB compare
ABZR86_RS18600 -3.2 -19.9 YjbH domain-containing protein compare
ABZR86_RS12595 -3.1 -2.6 cell division ATP-binding protein FtsE compare
ABZR86_RS14930 -3.0 -10.1 exodeoxyribonuclease III compare
ABZR86_RS10830 -2.8 -3.1 Holliday junction branch migration DNA helicase RuvB compare
ABZR86_RS10955 -2.7 -15.0 alpha,alpha-trehalose-phosphate synthase (UDP-forming) conserved
ABZR86_RS18450 -2.7 -4.1 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha compare
ABZR86_RS12215 -2.7 -4.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABZR86_RS09840 -2.7 -1.8 Trm112 family protein compare
ABZR86_RS09535 -2.6 -2.2 preprotein translocase subunit YajC compare
ABZR86_RS09935 -2.6 -2.7 DUF4105 domain-containing protein compare
ABZR86_RS05445 -2.6 -3.9 helix-turn-helix domain-containing protein compare
ABZR86_RS09885 -2.5 -2.9 trypsin-like peptidase domain-containing protein compare
ABZR86_RS10710 -2.4 -2.9 transcriptional regulator NrdR compare
ABZR86_RS18595 -2.4 -6.4 capsule biosynthesis GfcC family protein compare
ABZR86_RS19235 -2.4 -3.6 phosphoribosylformylglycinamidine synthase compare
ABZR86_RS07180 -2.4 -5.5 RNA polymerase sigma factor RpoE compare
ABZR86_RS05700 -2.4 -4.5 SsrA-binding protein SmpB compare
ABZR86_RS07665 -2.4 -4.7 exodeoxyribonuclease V subunit beta compare
ABZR86_RS12410 -2.3 -3.9 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
ABZR86_RS13355 -2.3 -11.8 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR86_RS15640 -2.3 -2.7 orotate phosphoribosyltransferase compare
ABZR86_RS12280 -2.3 -2.0 dihydrolipoyl dehydrogenase compare
ABZR86_RS02165 -2.2 -16.7 aconitate hydratase AcnA compare
ABZR86_RS15670 -2.2 -12.8 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR86_RS02215 -2.2 -2.7 FHA domain-containing protein compare
ABZR86_RS12590 -2.1 -13.8 permease-like cell division protein FtsX compare
ABZR86_RS11655 -2.1 -6.2 SLC13 family permease compare
ABZR86_RS00660 -2.1 -4.0 recombinase RecA compare
ABZR86_RS00685 -2.0 -2.5 carbon storage regulator CsrA compare
ABZR86_RS17485 -1.9 -11.3 septal ring lytic transglycosylase RlpA family protein compare
ABZR86_RS19865 -1.8 -3.8 phosphoribosylformylglycinamidine cyclo-ligase compare
ABZR86_RS11485 -1.8 -6.7 hypothetical protein compare
ABZR86_RS06780 -1.7 -4.1 CvpA family protein compare
ABZR86_RS02200 -1.7 -11.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR86_RS08415 -1.7 -3.1 OmpA family protein compare
ABZR86_RS07660 -1.7 -3.6 exodeoxyribonuclease V subunit gamma compare
ABZR86_RS18960 -1.6 -4.8 TetR/AcrR family transcriptional regulator compare
ABZR86_RS18640 -1.6 -8.0 class I fructose-bisphosphate aldolase compare
ABZR86_RS18355 -1.6 -2.0 PepSY domain-containing protein compare
ABZR86_RS03990 -1.6 -2.4 HlyD family efflux transporter periplasmic adaptor subunit compare
ABZR86_RS11825 -1.6 -2.3 citrate synthase compare
ABZR86_RS06030 -1.5 -1.6 transcription termination factor NusA compare
ABZR86_RS06785 -1.5 -4.4 SPOR domain-containing protein compare
ABZR86_RS02195 -1.5 -3.5 ATP-dependent Clp protease adapter ClpS compare
ABZR86_RS08865 -1.5 -1.8 30S ribosomal protein S18 compare
ABZR86_RS19225 -1.4 -3.1 site-specific tyrosine recombinase XerD compare
ABZR86_RS17015 -1.4 -10.1 DNA polymerase I compare
ABZR86_RS06190 -1.4 -2.4 YceD family protein compare
ABZR86_RS14580 -1.4 -2.8 DUF3224 domain-containing protein compare
ABZR86_RS14085 -1.4 -3.9 hypothetical protein compare
ABZR86_RS07265 -1.3 -5.8 protein phosphatase 2C domain-containing protein compare
ABZR86_RS10840 -1.3 -3.5 Holliday junction branch migration protein RuvA compare
ABZR86_RS22135 -1.3 -3.9 hypothetical protein compare
ABZR86_RS20820 -1.3 -1.5 CsbD family protein compare
ABZR86_RS12835 -1.3 -6.2 DedA family protein compare
ABZR86_RS11900 -1.3 -2.0 ribonuclease PH compare
ABZR86_RS17075 -1.3 -4.2 four helix bundle protein compare
ABZR86_RS05910 -1.3 -3.7 cupin domain-containing protein compare
ABZR86_RS09660 -1.3 -3.3 MerR family transcriptional regulator compare
ABZR86_RS16045 -1.2 -6.7 N-acetylglucosamine-6-phosphate deacetylase compare
ABZR86_RS07130 -1.2 -7.8 hypothetical protein compare
ABZR86_RS13380 -1.2 -1.8 Sec-independent protein translocase subunit TatA compare
ABZR86_RS02180 -1.2 -2.6 high frequency lysogenization protein HflD compare
ABZR86_RS01565 -1.2 -2.0 hypothetical protein compare
ABZR86_RS06590 -1.2 -2.3 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABZR86_RS13370 -1.2 -8.0 twin-arginine translocase subunit TatC compare
ABZR86_RS07310 -1.2 -4.5 tRNA-Val compare
ABZR86_RS10480 -1.2 -3.7 3-dehydroquinate synthase compare
ABZR86_RS19980 -1.2 -5.2 AsmA family protein compare
ABZR86_RS21345 -1.1 -6.6 GNAT family N-acetyltransferase compare
ABZR86_RS12205 -1.1 -4.9 co-chaperone DjlA compare
ABZR86_RS06275 -1.1 -3.6 DUF6165 family protein compare
ABZR86_RS08775 -1.1 -3.4 HAD-IA family hydrolase compare
ABZR86_RS12605 -1.1 -2.3 thioredoxin TrxA compare
ABZR86_RS18705 -1.1 -1.5 pyridoxal-phosphate dependent enzyme compare
ABZR86_RS11970 -1.1 -7.9 aminopeptidase P N-terminal domain-containing protein compare
ABZR86_RS11985 -1.1 -4.6 cell division protein ZapA compare
ABZR86_RS11815 -1.1 -4.8 penicillin-binding protein 1A compare
ABZR86_RS13935 -1.1 -3.5 lipid A biosynthesis acyltransferase compare
ABZR86_RS08435 -1.1 -3.0 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare
ABZR86_RS14100 -1.1 -4.7 DNA adenine methylase compare
ABZR86_RS13385 -1.1 -5.8 lipid-binding SYLF domain-containing protein compare
ABZR86_RS19715 -1.1 -5.9 Dps family protein compare
ABZR86_RS21350 -1.0 -4.0 septum site-determining protein MinC compare
ABZR86_RS21725 -1.0 -7.0 YhdP family protein compare
ABZR86_RS06265 -1.0 -4.2 3-deoxy-D-manno-octulosonic acid kinase compare
ABZR86_RS17480 -1.0 -4.6 lytic murein transglycosylase B compare
ABZR86_RS20980 -1.0 -1.9 hypothetical protein compare
ABZR86_RS07820 -1.0 -1.3 Spy/CpxP family protein refolding chaperone compare
ABZR86_RS11870 -1.0 -6.3 phospholipid-binding protein MlaC compare
ABZR86_RS18720 -0.9 -2.7 dTDP-4-dehydrorhamnose reductase compare
ABZR86_RS15025 -0.9 -2.7 tyrosine recombinase XerC compare
ABZR86_RS12900 -0.9 -5.7 heme A synthase compare
ABZR86_RS12760 -0.9 -5.3 LTA synthase family protein compare
ABZR86_RS05690 -0.9 -1.0 RnfH family protein compare
ABZR86_RS08250 -0.9 -1.9 phosphate signaling complex protein PhoU compare
ABZR86_RS19710 -0.9 -7.3 glycosyltransferase family 2 protein compare
ABZR86_RS11885 -0.9 -3.3 ATP-binding cassette domain-containing protein compare
ABZR86_RS06270 -0.9 -4.4 glycosyltransferase family 9 protein compare
ABZR86_RS10530 -0.9 -1.2 H-NS histone family protein compare
ABZR86_RS12895 -0.9 -3.4 heme o synthase compare
ABZR86_RS09505 -0.9 -4.6 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare
ABZR86_RS17095 -0.9 -4.0 protein-disulfide reductase DsbD compare
ABZR86_RS07340 -0.9 -1.4 tRNA-Leu compare
ABZR86_RS05820 -0.9 -3.1 GntR family transcriptional regulator compare
ABZR86_RS13430 -0.9 -2.7 DUF4156 domain-containing protein compare
ABZR86_RS17210 -0.9 -6.1 TolC family outer membrane protein compare
ABZR86_RS05860 -0.9 -1.6 adenylosuccinate lyase compare
ABZR86_RS08430 -0.8 -2.4 2-methylaconitate cis-trans isomerase PrpF compare
ABZR86_RS07725 -0.8 -1.7 barstar family protein compare
ABZR86_RS01755 -0.8 -2.9 helix-turn-helix domain-containing protein compare
ABZR86_RS10315 -0.8 -2.8 Imm42 family immunity protein compare
ABZR86_RS07560 -0.8 -4.9 NAD-glutamate dehydrogenase domain-containing protein compare
ABZR86_RS09145 -0.8 -1.5 hypothetical protein compare
ABZR86_RS11880 -0.8 -2.7 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
ABZR86_RS07165 -0.8 -5.7 translation elongation factor 4 compare
ABZR86_RS21280 -0.8 -2.8 hypothetical protein compare
ABZR86_RS16770 -0.8 -1.1 phage holin family protein compare
ABZR86_RS16525 -0.8 -2.7 alpha/beta fold hydrolase compare
ABZR86_RS11735 -0.8 -1.0 large-conductance mechanosensitive channel protein MscL compare
ABZR86_RS19805 -0.8 -3.3 HPr(Ser) kinase/phosphatase compare
ABZR86_RS01150 -0.8 -1.0 hypothetical protein compare
ABZR86_RS08755 -0.8 -3.8 membrane protein insertion efficiency factor YidD compare
ABZR86_RS02185 -0.8 -4.3 tRNA 2-thiouridine(34) synthase MnmA compare
ABZR86_RS05545 -0.8 -4.7 glycosyltransferase family 4 protein compare
ABZR86_RS15890 -0.8 -2.8 TetR/AcrR family transcriptional regulator compare
ABZR86_RS20570 -0.8 -2.0 acetyl-CoA C-acyltransferase compare
ABZR86_RS02210 -0.7 -1.6 polyhydroxyalkanoic acid system family protein compare
ABZR86_RS17905 -0.7 -2.6 DUF6229 family protein compare
ABZR86_RS20700 -0.7 -1.0 transcriptional repressor AgaR compare
ABZR86_RS12925 -0.7 -5.4 cytochrome c oxidase subunit I compare
ABZR86_RS20600 -0.7 -3.8 ferrous iron transporter B compare
ABZR86_RS12910 -0.7 -5.0 SURF1 family protein compare
ABZR86_RS21305 -0.7 -2.6 copper chaperone PCu(A)C compare
ABZR86_RS02400 -0.7 -0.9 hypothetical protein compare
ABZR86_RS05665 -0.7 -4.3 DNA repair protein RecN compare
ABZR86_RS18765 -0.7 -1.4 dehydrogenase compare
ABZR86_RS00580 -0.7 -3.3 protease HtpX compare
ABZR86_RS16760 -0.7 -1.3 phage tail terminator-like protein compare
ABZR86_RS03505 -0.7 -1.9 aldolase/citrate lyase family protein compare
ABZR86_RS11875 -0.7 -4.2 outer membrane lipid asymmetry maintenance protein MlaD compare
ABZR86_RS21480 -0.7 -3.8 arginase family protein compare
ABZR86_RS10430 -0.7 -3.5 YggT family protein compare
ABZR86_RS15330 -0.7 -4.0 TetR/AcrR family transcriptional regulator compare
ABZR86_RS02135 -0.7 -1.6 pseudouridine synthase compare
ABZR86_RS08270 -0.7 -5.2 ribonuclease R compare
ABZR86_RS21355 -0.7 -2.8 septum site-determining protein MinD compare
ABZR86_RS12415 -0.7 -1.9 NADP-dependent malic enzyme compare
ABZR86_RS07160 -0.7 -3.3 signal peptidase I compare
ABZR86_RS12790 -0.7 -2.0 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase compare
ABZR86_RS19800 -0.7 -4.2 RNase adapter RapZ compare
ABZR86_RS18130 -0.7 -2.5 FAD/NAD(P)-binding protein compare
ABZR86_RS10110 -0.7 -2.6 ATP-binding protein compare
ABZR86_RS21335 -0.7 -0.7 response regulator transcription factor compare
ABZR86_RS19515 -0.7 -4.1 molybdopterin cofactor-binding domain-containing protein compare
ABZR86_RS10950 -0.7 -4.6 glycoside hydrolase family 15 protein compare
ABZR86_RS12915 -0.7 -1.3 twin transmembrane helix small protein compare
ABZR86_RS08185 -0.6 -4.1 endonuclease III compare
ABZR86_RS11280 -0.6 -4.1 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABZR86_RS20605 -0.6 -1.3 FeoA family protein compare
ABZR86_RS13180 -0.6 -0.8 K(+)-transporting ATPase subunit F compare
ABZR86_RS07620 -0.6 -4.8 cytochrome o ubiquinol oxidase subunit I compare
ABZR86_RS09815 -0.6 -2.5 SDR family NAD(P)-dependent oxidoreductase compare
ABZR86_RS18690 -0.6 -3.4 DUF4398 domain-containing protein compare
ABZR86_RS09870 -0.6 -4.3 cytochrome c1 compare
ABZR86_RS19795 -0.6 -3.4 PTS sugar transporter subunit IIA compare
ABZR86_RS09380 -0.6 -2.5 response regulator transcription factor compare
ABZR86_RS09015 -0.6 -2.6 anti-sigma factor compare
ABZR86_RS07615 -0.6 -2.3 cytochrome o ubiquinol oxidase subunit III compare
ABZR86_RS21310 -0.6 -3.1 cytochrome c oxidase assembly protein compare
ABZR86_RS08355 -0.6 -2.1 FtsH protease activity modulator HflK compare
ABZR86_RS16745 -0.6 -1.6 hypothetical protein compare
ABZR86_RS07430 -0.6 -1.7 hypothetical protein compare
ABZR86_RS12930 -0.6 -3.9 cytochrome c oxidase subunit II compare
ABZR86_RS18725 -0.6 -2.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR86_RS15665 -0.6 -3.0 anhydro-N-acetylmuramic acid kinase compare
ABZR86_RS06260 -0.6 -2.3 MBL fold metallo-hydrolase compare
ABZR86_RS20640 -0.6 -3.4 translational GTPase TypA compare
ABZR86_RS21300 -0.6 -4.0 SCO family protein compare
ABZR86_RS06690 -0.6 -1.9 acireductone synthase compare
ABZR86_RS02805 -0.6 -1.3 STAS/SEC14 domain-containing protein compare
ABZR86_RS02455 -0.6 -1.5 hypothetical protein compare
ABZR86_RS20560 -0.6 -1.6 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium Chloride in Dyella japonica UNC79MFTsu3.2

For stress Sodium Chloride across organisms