Experiment set3IT058 for Burkholderia phytofirmans PsJN

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L-Glutamic acid monopotassium salt monohydrate nitrogen source

200 most important genes:

  gene name fitness t score description  
BPHYT_RS13705 -7.4 -4.0 chorismate synthase compare
BPHYT_RS14915 -7.3 -5.1 phosphoserine aminotransferase compare
BPHYT_RS33915 -7.0 -6.8 isopropylmalate isomerase compare
BPHYT_RS06555 -7.0 -6.8 ketol-acid reductoisomerase compare
BPHYT_RS14845 -6.8 -3.7 cysteine synthase compare
BPHYT_RS14895 -6.6 -4.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS03150 -6.4 -14.9 Phosphoglycerate dehydrogenase (EC:1.1.1.95) (from data) compare
BPHYT_RS14910 -6.3 -10.4 chorismate mutase compare
BPHYT_RS15915 -6.3 -7.5 ornithine carbamoyltransferase compare
BPHYT_RS15920 -6.3 -8.7 argininosuccinate synthase compare
BPHYT_RS33900 -6.0 -12.3 3-isopropylmalate dehydrogenase compare
BPHYT_RS17680 -6.0 -4.0 imidazole glycerol phosphate synthase subunit HisF compare
BPHYT_RS18320 -5.9 -9.5 orotate phosphoribosyltransferase compare
BPHYT_RS33865 -5.8 -8.9 tryptophan synthase alpha chain compare
BPHYT_RS12985 -5.8 -2.8 amino acid acetyltransferase compare
BPHYT_RS10100 -5.8 -3.7 dihydroxy-acid dehydratase compare
BPHYT_RS04725 -5.8 -7.8 sulfite reductase compare
BPHYT_RS09515 -5.7 -3.9 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS16735 -5.6 -7.1 phosphogluconate dehydratase compare
BPHYT_RS04740 -5.6 -5.7 sulfate adenylyltransferase subunit 2 compare
BPHYT_RS33875 -5.5 -8.9 tryptophan synthase subunit alpha compare
BPHYT_RS08960 -5.5 -2.3 threonine synthase compare
BPHYT_RS17885 -5.4 -5.9 3-dehydroquinate synthase compare
BPHYT_RS06545 -5.3 -12.8 acetolactate synthase compare
BPHYT_RS17690 -5.3 -7.9 imidazole glycerol phosphate synthase compare
BPHYT_RS03640 -5.2 -3.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BPHYT_RS14855 -5.2 -2.2 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS33880 -5.2 -9.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
BPHYT_RS14195 -5.1 -2.8 carbamoyl phosphate synthase small subunit compare
BPHYT_RS29540 -5.1 -1.3 aldolase compare
BPHYT_RS33840 -5.1 -9.1 amidophosphoribosyltransferase compare
BPHYT_RS08955 -5.0 -6.4 homoserine dehydrogenase compare
BPHYT_RS17715 -5.0 -9.0 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
BPHYT_RS17405 -5.0 -1.2 indole-3-glycerol phosphate synthase compare
BPHYT_RS33645 -5.0 -6.9 homoserine kinase compare
BPHYT_RS14190 -4.9 -9.6 carbamoyl phosphate synthase large subunit compare
BPHYT_RS33835 -4.8 -5.9 O-succinylhomoserine sulfhydrylase compare
BPHYT_RS16675 -4.8 -2.6 dihydroorotase compare
BPHYT_RS16245 -4.8 -6.0 phosphoribosylaminoimidazole carboxylase compare
BPHYT_RS02590 -4.8 -7.8 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS12055 -4.7 -13.9 phosphoenolpyruvate synthase compare
BPHYT_RS10135 -4.7 -1.2 hypothetical protein compare
BPHYT_RS04720 -4.7 -5.1 transcriptional regulator compare
BPHYT_RS04965 -4.5 -6.7 ATP-binding protein compare
BPHYT_RS29520 -4.5 -1.1 hypothetical protein compare
BPHYT_RS17685 -4.4 -5.1 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BPHYT_RS16255 -4.3 -3.0 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS08765 -4.2 -1.0 ABC transporter ATP-binding protein compare
BPHYT_RS06900 -4.2 -3.9 aspartate aminotransferase compare
BPHYT_RS16905 -4.2 -5.8 orotidine 5'-phosphate decarboxylase compare
BPHYT_RS06610 -4.1 -1.8 triosephosphate isomerase compare
BPHYT_RS06045 -4.1 -7.8 transaldolase compare
BPHYT_RS03725 -4.0 -1.7 serine hydroxymethyltransferase compare
BPHYT_RS18590 -4.0 -1.0 hypothetical protein compare
BPHYT_RS01595 -4.0 -7.6 homoserine O-acetyltransferase compare
BPHYT_RS10345 -3.9 -1.0 flagellar motor protein MotB compare
BPHYT_RS17670 -3.9 -3.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
BPHYT_RS01455 -3.9 -1.0 peptide deformylase compare
BPHYT_RS28620 -3.8 -2.4 enoyl-CoA hydratase compare
BPHYT_RS33905 -3.8 -1.3 3-isopropylmalate dehydratase small subunit compare
BPHYT_RS07220 -3.8 -1.8 GCN5 family acetyltransferase compare
BPHYT_RS17700 -3.8 -4.2 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (from data) compare
BPHYT_RS17675 -3.7 -2.2 phosphoribosyl-AMP cyclohydrolase compare
BPHYT_RS16270 -3.7 -3.1 phosphoglycerate kinase compare
BPHYT_RS17400 -3.7 -5.7 anthranilate phosphoribosyltransferase compare
BPHYT_RS16710 -3.7 -1.3 LysR family transcriptional regulator compare
BPHYT_RS11795 -3.6 -1.2 membrane protein compare
BPHYT_RS12530 -3.5 -3.2 ATP phosphoribosyltransferase regulatory subunit compare
BPHYT_RS05960 -3.5 -5.0 endoribonuclease L-PSP compare
BPHYT_RS15670 -3.4 -5.3 phosphoribosylglycinamide formyltransferase compare
BPHYT_RS33765 -3.4 -1.2 membrane protein compare
BPHYT_RS28255 -3.3 -1.4 hypothetical protein compare
BPHYT_RS03645 -3.3 -2.6 tRNA dimethylallyltransferase compare
BPHYT_RS16335 -3.3 -0.8 membrane protein compare
BPHYT_RS04385 -3.3 -2.8 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS35750 -3.3 -1.1 hypothetical protein compare
BPHYT_RS17520 -3.3 -4.5 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS16835 -3.3 -6.1 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS00705 -3.2 -1.8 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS30750 -3.2 -2.3 GntR family transcriptional regulator compare
BPHYT_RS01095 -3.2 -1.1 hypothetical protein compare
BPHYT_RS03535 -3.1 -3.7 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BPHYT_RS06405 -3.1 -3.9 phosphoribosylamine--glycine ligase compare
BPHYT_RS17395 -2.9 -1.8 anthranilate synthase subunit II compare
BPHYT_RS04730 -2.9 -3.1 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
BPHYT_RS17095 -2.9 -2.5 proline--tRNA ligase compare
BPHYT_RS08565 -2.9 -0.9 dihydroorotate dehydrogenase compare
BPHYT_RS16840 -2.8 -3.5 transketolase compare
BPHYT_RS04745 -2.8 -5.9 sulfate adenylyltransferase compare
BPHYT_RS19325 -2.8 -3.2 glycine cleavage system H protein compare
BPHYT_RS17390 -2.8 -8.3 anthranilate synthase subunit I compare
BPHYT_RS06685 -2.8 -3.6 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS33150 -2.7 -0.9 beta-lactamase compare
BPHYT_RS33920 -2.7 -5.9 type II citrate synthase compare
BPHYT_RS16975 -2.7 -5.6 shikimate 5-dehydrogenase compare
BPHYT_RS16290 -2.6 -1.1 hypothetical protein compare
BPHYT_RS02100 -2.6 -1.4 AsnC family transcriptional regulator compare
BPHYT_RS03625 -2.6 -7.7 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS06990 -2.6 -1.8 membrane protein compare
BPHYT_RS01590 -2.6 -4.6 methionine biosynthesis protein MetW compare
BPHYT_RS12845 -2.5 -12.4 ATPase compare
BPHYT_RS09500 -2.5 -2.3 glucose-6-phosphate isomerase compare
BPHYT_RS28075 -2.5 -1.0 cytochrome B561 compare
BPHYT_RS19785 -2.5 -1.3 chemotaxis protein CheY compare
BPHYT_RS04095 -2.5 -1.3 SAM-dependent methyltransferase PhcB compare
BPHYT_RS03495 -2.4 -2.9 hypothetical protein compare
BPHYT_RS18705 -2.4 -1.6 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS12150 -2.4 -9.8 PII uridylyl-transferase compare
BPHYT_RS33610 -2.4 -1.2 DNA polymerase I compare
BPHYT_RS12935 -2.4 -7.6 chemotaxis protein CheY compare
BPHYT_RS32475 -2.4 -1.8 dihydroxyacetone kinase compare
BPHYT_RS10240 -2.4 -1.1 translation initiation inhibitor compare
BPHYT_RS02905 -2.4 -11.2 RNA polymerase subunit sigma-54 compare
BPHYT_RS36150 -2.3 -2.2 hypothetical protein compare
BPHYT_RS18340 -2.3 -2.2 n-acetyl-gamma-glutamyl-phosphate reductase compare
BPHYT_RS13220 -2.3 -5.7 phosphomethylpyrimidine synthase compare
BPHYT_RS17890 -2.2 -1.3 shikimate kinase compare
BPHYT_RS02610 -2.2 -2.8 glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
BPHYT_RS23230 -2.1 -1.6 histidine kinase compare
BPHYT_RS30645 -2.1 -2.1 hypothetical protein compare
BPHYT_RS31840 -2.0 -1.7 anhydrase compare
BPHYT_RS20845 -2.0 -1.3 peroxidase compare
BPHYT_RS08950 -2.0 -4.6 aminotransferase compare
BPHYT_RS24730 -2.0 -3.1 AraC family transcriptional regulator compare
BPHYT_RS07325 -2.0 -1.0 GntR family transcriptional regulator compare
BPHYT_RS10065 -2.0 -1.5 cytochrome C oxidase subunit I compare
BPHYT_RS32730 -1.9 -2.4 histidine phosphatase compare
BPHYT_RS22420 -1.9 -1.2 membrane protein compare
BPHYT_RS34490 -1.9 -0.8 hypothetical protein compare
BPHYT_RS11900 -1.9 -2.1 LysR family transcriptional regulator compare
BPHYT_RS11745 -1.9 -1.2 (2Fe-2S)-binding protein compare
BPHYT_RS12940 -1.8 -3.5 signal transduction histidine kinase compare
BPHYT_RS04830 -1.8 -2.4 hypothetical protein compare
BPHYT_RS25335 -1.8 -1.0 hypothetical protein compare
BPHYT_RS30720 -1.8 -1.7 hypothetical protein compare
BPHYT_RS27295 -1.8 -1.1 hypothetical protein compare
BPHYT_RS04820 -1.8 -3.9 LysR family transcriptional regulator compare
BPHYT_RS05010 -1.8 -2.3 RpiR family transcriptional regulator compare
BPHYT_RS23600 -1.8 -1.7 hypothetical protein compare
BPHYT_RS02305 -1.8 -6.8 methionine synthase compare
BPHYT_RS26185 -1.8 -1.1 thioesterase compare
BPHYT_RS11170 -1.7 -1.2 hypothetical protein compare
BPHYT_RS02650 -1.7 -1.2 membrane protein compare
BPHYT_RS10740 -1.7 -1.0 LuxR family transcriptional regulator compare
BPHYT_RS23940 -1.7 -1.5 GntR family transcriptional regulator compare
BPHYT_RS29805 -1.7 -1.4 lysine transporter LysE compare
BPHYT_RS26665 -1.7 -4.5 cobalt-precorrin-6X reductase compare
BPHYT_RS13470 -1.7 -0.8 arylsulfate sulfotransferase compare
BPHYT_RS02880 -1.7 -1.1 ATP-dependent protease compare
BPHYT_RS08135 -1.6 -1.1 hypothetical protein compare
BPHYT_RS02310 -1.6 -8.1 5-methyltetrahydrofolate--homocysteine methyltransferase compare
BPHYT_RS15015 -1.6 -1.1 ArsR family transcriptional regulator compare
BPHYT_RS33630 -1.6 -1.6 chromate transporter compare
BPHYT_RS18420 -1.6 -1.8 hypothetical protein compare
BPHYT_RS04940 -1.6 -2.8 hypothetical protein compare
BPHYT_RS35405 -1.6 -2.0 hypothetical protein compare
BPHYT_RS07165 -1.6 -1.4 peptide ABC transporter permease compare
BPHYT_RS04890 -1.5 -1.3 cobalamin biosynthesis protein CobD compare
BPHYT_RS01240 -1.5 -1.9 hypothetical protein compare
BPHYT_RS09905 -1.5 -1.2 hypothetical protein compare
BPHYT_RS29015 -1.5 -1.5 RND transporter compare
BPHYT_RS30425 -1.5 -1.0 LysR family transcriptional regulator compare
BPHYT_RS16700 -1.5 -3.9 ABC transporter compare
BPHYT_RS28605 -1.5 -1.6 NADPH-dependent FMN reductase compare
BPHYT_RS30995 -1.5 -0.9 glucose-1-phosphate thymidylyltransferase compare
BPHYT_RS15550 -1.5 -1.3 transcriptional regulator compare
BPHYT_RS09810 -1.5 -1.2 hypothetical protein compare
BPHYT_RS33360 -1.5 -1.9 formyl-CoA transferase compare
BPHYT_RS02975 -1.5 -2.6 membrane protein compare
BPHYT_RS04895 -1.5 -4.1 adenosylcobinamide kinase compare
BPHYT_RS31205 -1.5 -1.4 peptide ABC transporter ATP-binding protein compare
BPHYT_RS29345 -1.5 -1.5 lipoyl synthase compare
BPHYT_RS10435 -1.5 -2.9 ThiJ/PfpI domain-containing protein compare
BPHYT_RS05910 -1.5 -1.3 hypothetical protein compare
BPHYT_RS24630 -1.4 -1.7 (2Fe-2S)-binding protein compare
BPHYT_RS12840 -1.4 -3.2 pyruvate dehydrogenase compare
BPHYT_RS07835 -1.4 -1.9 muconolactone delta-isomerase compare
BPHYT_RS26685 -1.4 -1.3 precorrin-8X methylmutase compare
BPHYT_RS05285 -1.4 -1.0 hypothetical protein compare
BPHYT_RS04875 -1.4 -2.0 alpha-ribazole phosphatase compare
BPHYT_RS01685 -1.4 -4.1 phytanoyl-CoA dioxygenase compare
BPHYT_RS18760 -1.4 -2.1 flagellar biosynthesis protein FliT compare
BPHYT_RS15330 -1.4 -3.1 nucleoside-triphosphate diphosphatase compare
BPHYT_RS33120 -1.4 -2.0 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
BPHYT_RS10760 -1.4 -3.6 major facilitator transporter compare
BPHYT_RS25560 -1.4 -1.4 RNA polymerase sigma factor compare
BPHYT_RS10395 -1.3 -1.4 sulfonate ABC transporter compare
BPHYT_RS23395 -1.3 -0.9 glycosyl transferase compare
BPHYT_RS01955 -1.3 -1.5 hypothetical protein compare
BPHYT_RS02955 -1.3 -4.9 formyltetrahydrofolate deformylase compare
BPHYT_RS28575 -1.3 -0.8 transcriptional regulator compare
BPHYT_RS13645 -1.3 -8.1 threonine--tRNA ligase compare
BPHYT_RS14900 -1.3 -1.6 prephenate dehydrogenase compare
BPHYT_RS30685 -1.3 -1.8 ubiquinol oxidase subunit II, cyanide insensitive compare
BPHYT_RS06985 -1.3 -3.6 fumarate hydratase compare
BPHYT_RS28930 -1.3 -0.8 chromosome partitioning protein ParA compare
BPHYT_RS21485 -1.3 -0.9 hypothetical protein compare
BPHYT_RS17920 -1.3 -1.0 protein CyaY compare
BPHYT_RS26280 -1.3 -1.3 hypothetical protein compare
BPHYT_RS03755 -1.3 -2.1 pilus assembly protein PilE compare


Specific Phenotypes

For 3 genes in this experiment

For nitrogen source L-Glutamic acid monopotassium salt monohydrate in Burkholderia phytofirmans PsJN

For nitrogen source L-Glutamic acid monopotassium salt monohydrate across organisms