Experiment set3IT057 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Amylose from potato

200 most important genes:

  gene name fitness t score description  
BT1377 -4.7 -3.2 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT3933 -4.2 -5.8 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT3395 -4.2 -8.0 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT3733 -3.9 -9.4 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT2122 -3.7 -2.5 lysyl-tRNA synthetase (NCBI ptt file) compare
BT1857 -3.6 -6.5 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT3759 -3.5 -8.1 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT2074 -3.4 -9.2 ketol-acid reductoisomerase (NCBI ptt file) compare
BT1843 -3.4 -8.9 adenylosuccinate synthetase (NCBI ptt file) compare
BT1379 -3.3 -3.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT2402 -3.3 -12.1 homoserine phosphotransferase HomK (from data) compare
BT2129 -3.2 -4.4 aspartate--ammonia ligase (NCBI ptt file) compare
BT3719 -3.2 -3.8 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT2078 -3.2 -12.1 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT3761 -3.1 -5.2 N-succinylglutamate synthase (from data) compare
BT1607 -3.1 -4.7 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT2415 -3.1 -10.5 aspartate aminotransferase (NCBI ptt file) compare
BT1380 -3.1 -2.1 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) compare
BT1153 -3.0 -5.1 phosphoserine aminotransferase (NCBI ptt file) compare
BT3757 -3.0 -6.4 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT2403 -3.0 -9.7 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT2076 -3.0 -7.3 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT1704 -3.0 -2.0 hypothetical protein (NCBI ptt file) compare
BT3197 -3.0 -2.0 hypothetical protein (NCBI ptt file) compare
BT3718 -3.0 -9.5 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT3758 -3.0 -2.9 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT1859 -2.9 -3.5 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT0527 -2.9 -4.0 tryptophan synthase alpha chain (NCBI ptt file) compare
BT0530 -2.9 -4.4 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT1152 -2.9 -2.8 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT1861 -2.9 -6.1 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT3549 -2.9 -5.8 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT1375 -2.9 -8.0 aspartokinase (NCBI ptt file) compare
BT0532 -2.8 -5.3 anthranilate synthase component I (NCBI ptt file) compare
BT3717 -2.8 -4.2 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT0201 -2.8 -4.2 histidinol dehydrogenase (NCBI ptt file) compare
BT0200 -2.7 -2.7 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT0202 -2.7 -4.5 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT1858 -2.7 -7.0 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT2077 -2.7 -7.4 acetolactate synthase large subunit (NCBI ptt file) compare
BT3253 -2.7 -3.2 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT0891 -2.6 -1.8 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT3760 -2.6 -5.3 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT3320 -2.6 -6.9 dihydrodipicolinate reductase (NCBI ptt file) compare
BT0528 -2.6 -4.6 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT_2008 -2.6 -2.5 hypothetical protein (RefSeq) compare
BT0738 -2.6 -3.5 serine hydroxymethyltransferase (NCBI ptt file) compare
BT0203 -2.5 -2.9 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT0215 -2.5 -2.4 iron uptake regulatory protein (NCBI ptt file) compare
BT4644 -2.4 -2.9 putative anti-sigma factor (NCBI ptt file) compare
BT2837 -2.4 -10.2 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT0972 -2.4 -2.3 putative oxidoreductase (NCBI ptt file) compare
BT1381 -2.4 -5.1 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT1860 -2.4 -3.9 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT2401 -2.4 -8.3 threonine synthase (NCBI ptt file) compare
BT0892 -2.3 -1.6 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT0397 -2.2 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1733 -2.2 -3.7 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT2836 -2.2 -11.7 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT0529 -2.1 -2.5 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT1374 -2.1 -5.2 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT0869 -2.1 -2.0 hypothetical protein (NCBI ptt file) compare
BT0533 -2.1 -2.8 tryptophan synthase beta chain (NCBI ptt file) compare
BT3936 -2.1 -3.1 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT0033 -2.0 -2.0 hypothetical protein (NCBI ptt file) compare
BT2684 -2.0 -1.9 hypothetical protein (NCBI ptt file) compare
BT2080 -2.0 -4.3 L-cysteine desulfidase cdsB (from data) compare
BT0833 -1.9 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1844 -1.9 -3.8 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT3935 -1.9 -3.8 aminotransferase (NCBI ptt file) compare
BT4098 -1.9 -1.3 Trk system K+ uptake protein trkA (NCBI ptt file) compare
BT3361 -1.8 -6.7 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT1221 -1.8 -2.7 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT4211 -1.8 -2.4 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT1990 -1.7 -1.6 hypothetical protein (NCBI ptt file) compare
BT1470 -1.7 -2.0 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT3737 -1.7 -1.9 hypothetical protein (NCBI ptt file) compare
BT1145 -1.7 -2.0 glucose-inhibited division protein (NCBI ptt file) compare
BT1220 -1.7 -1.6 6-phosphogluconolactonase (NCBI ptt file) compare
BT4102 -1.7 -1.7 putative Sec-independent protein translocase (NCBI ptt file) compare
BT4177 -1.7 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1270 -1.6 -4.6 putative Na+/H+ antiporter (NCBI ptt file) compare
BT1746 -1.6 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT1970 -1.6 -7.3 glutamate dehydrogenase (NCBI ptt file) compare
BT4551 -1.6 -2.2 putative GTPase, ThdF family (NCBI ptt file) compare
BT1747 -1.6 -4.5 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT0844 -1.6 -1.5 hypothetical protein (NCBI ptt file) compare
BT4339 -1.6 -2.1 glutamine synthetase (NCBI ptt file) compare
BT3702 SusC -1.6 -9.8 SusC, outer membrane protein involved in starch binding (NCBI ptt file) compare
BT1222 -1.5 -1.5 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT0611 -1.5 -2.1 glycosyltransferase (NCBI ptt file) compare
BT3920 -1.5 -1.1 conserved hypothetical protein (NCBI ptt file) compare
BT3164 -1.5 -6.6 quinolinate synthetase A (NCBI ptt file) compare
BT3193 -1.5 -8.8 putative coenzyme A transferase (NCBI ptt file) compare
BT1557 -1.5 -1.4 hypothetical protein (NCBI ptt file) compare
BT3394 -1.5 -5.9 putative arginine decarboxylase (NCBI ptt file) compare
BT0531 -1.5 -2.0 anthranilate synthase component II (NCBI ptt file) compare
BT0321 -1.4 -2.3 cytidine/deoxycytidylate deaminase (NCBI ptt file) compare
BT3182 -1.4 -5.5 rubrerythrin (NCBI ptt file) compare
BT3866 -1.4 -7.9 ammonium-dependent carbamoyl phosphate synthetase CarB2 (EC 6.3.4.16) (from data) compare
BT0004 -1.4 -1.3 hypothetical protein (NCBI ptt file) compare
BT3184 -1.4 -8.4 L-aspartate oxidase (NCBI ptt file) compare
BT0500 -1.4 -2.4 putative transport protein (NCBI ptt file) compare
BT3770 -1.4 -0.9 transcriptional regulator (NCBI ptt file) compare
BT3705 SusR -1.4 -8.4 regulatory protein SusR (NCBI ptt file) compare
BT1146 -1.4 -2.7 putative metallo-beta-lactamase (NCBI ptt file) compare
BT4571 -1.3 -1.6 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0923 -1.3 -1.6 putative periplasmic protein (NCBI ptt file) compare
BT1378 -1.3 -2.0 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT1868 -1.3 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT1173 -1.3 -2.0 hypothetical protein (NCBI ptt file) compare
BT0298 -1.3 -2.3 cation efflux system protein (outer membrane protein) (NCBI ptt file) compare
BT1476 -1.3 -3.1 aspartate aminotransferase (NCBI ptt file) compare
BT4558 -1.3 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT1520 -1.3 -2.4 putative transcriptional regulator (NCBI ptt file) compare
BT3839 -1.3 -1.5 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1168 -1.3 -1.7 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1058 -1.3 -7.2 two-component system sensor histidine kinase (NCBI ptt file) compare
BT2449 -1.3 -1.7 hypothetical protein (NCBI ptt file) compare
BT1944 -1.3 -1.8 putative transposase (NCBI ptt file) compare
BT1347 -1.3 -3.9 conserved hypothetical protein (NCBI ptt file) compare
BT0704 -1.3 -1.4 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT3912 -1.3 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT3211 -1.3 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT3703 SusB -1.2 -7.7 alpha-glucosidase SusB (NCBI ptt file) compare
BT3981 -1.2 -2.3 hypothetical protein (NCBI ptt file) compare
BT3701 SusD -1.2 -6.9 SusD, outer membrane protein (NCBI ptt file) compare
BT0936 -1.2 -1.8 hypothetical protein (NCBI ptt file) compare
BT2742 -1.2 -0.9 integrase, site-specific recombinase (NCBI ptt file) compare
BT0790 -1.2 -1.9 phosphomethylpyrimidine kinase (NCBI ptt file) compare
BT1137 -1.2 -1.2 hypothetical protein (NCBI ptt file) compare
BT0751 -1.2 -1.7 putative efflux pump component protein (NCBI ptt file) compare
BT1845 -1.2 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0782 -1.2 -1.2 hypothetical protein (NCBI ptt file) compare
BT1964 -1.2 -3.5 hypothetical protein (NCBI ptt file) compare
BT1070 -1.1 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0429 -1.1 -1.6 indolepyruvate oxidoreductase subunit iorB (NCBI ptt file) compare
BT2088 -1.1 -1.9 hypothetical protein (NCBI ptt file) compare
BT2281 -1.1 -1.7 hypothetical protein (NCBI ptt file) compare
BT4025 -1.1 -1.5 hypothetical protein (NCBI ptt file) compare
BT4191 -1.1 -6.3 hypothetical protein (NCBI ptt file) compare
BT0231 -1.1 -1.5 excisionase (NCBI ptt file) compare
BT1353 -1.1 -1.1 glycosyltransferase (NCBI ptt file) compare
BT0156 -1.1 -2.0 transcriptional regulator (NCBI ptt file) compare
BT3783 -1.1 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT2142 -1.1 -1.3 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT1617 -1.1 -2.4 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT2302 -1.1 -0.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3918 -1.1 -2.6 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT0875 -1.1 -2.4 beta-ureidopropionase (NCBI ptt file) compare
BT1095 -1.1 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT4003 -1.1 -2.2 stationary-phase survival protein SurE (NCBI ptt file) compare
BT2974 -1.1 -1.4 hypothetical protein (NCBI ptt file) compare
BT1576 -1.1 -1.4 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT2228 -1.1 -3.2 hypothetical protein (NCBI ptt file) compare
BT4487 -1.1 -2.8 putative membrane-bound lytic murein transglycosylase (NCBI ptt file) compare
BT2075 -1.1 -2.5 acyl-ACP thioesterase (NCBI ptt file) compare
BT0437 -1.0 -1.2 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT3882 -1.0 -1.3 putative DNA binding protein (NCBI ptt file) compare
BT0794 -1.0 -3.1 D-xylose-proton symporter (D-xylose transporter) (NCBI ptt file) compare
BT3845 -1.0 -1.7 inosine-5'-monophosphate dehydrogenase (NCBI ptt file) compare
BT4249 -1.0 -1.0 hypothetical protein (NCBI ptt file) compare
BT1455 -1.0 -2.0 protein rtcB (NCBI ptt file) compare
BT4318 -1.0 -2.7 ATP-binding protein (NCBI ptt file) compare
BT1341 -1.0 -3.0 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT2546 -1.0 -4.1 transcriptional regulator (NCBI ptt file) compare
BT2417 -1.0 -0.8 conserved hypothetical protein (NCBI ptt file) compare
BT1343 -1.0 -3.4 putative capsule biosynthesis protein (NCBI ptt file) compare
BT0281 -1.0 -2.6 putative DNA-binding protein (NCBI ptt file) compare
BT0315 -1.0 -2.8 hypothetical protein (NCBI ptt file) compare
BT4061 -1.0 -2.3 NADH dehydrogenase I, chain K (NCBI ptt file) compare
BT3194 -1.0 -2.7 hypothetical protein (NCBI ptt file) compare
BT2375 -1.0 -1.7 hypothetical protein (NCBI ptt file) compare
BT2687 -1.0 -3.5 cation efflux system protein (NCBI ptt file) compare
BT0954 -1.0 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0226 -1.0 -2.4 hypothetical protein (NCBI ptt file) compare
BT0139 -1.0 -2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1385 -1.0 -2.4 transcriptional regulator (NCBI ptt file) compare
p5482_02 -1.0 -3.9 hypothetical protein (NCBI) compare
BT1097 -1.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT1258 -1.0 -1.9 putative acetyltransferase (NCBI ptt file) compare
BT1411 -1.0 -1.3 methylated-DNA--protein-cysteine methyltransferase (NCBI ptt file) compare
BT1355 -1.0 -4.5 hypothetical protein (NCBI ptt file) compare
BT0185 -1.0 -0.9 conserved hypothetical protein (NCBI ptt file) compare
BT1444 -1.0 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1345 -1.0 -2.7 glycosyltransferase (NCBI ptt file) compare
BT4103 -1.0 -1.9 putative Sec-independent protein translocase (NCBI ptt file) compare
BT0588 -1.0 -2.4 BexA: efflux pump for ciprofloxacin, lomefloxacin, and paraquat (from data) compare
BT1718 -1.0 -3.7 putative 2-aminoethylphosphonate pyruvate aminotransferase (NCBI ptt file) compare
BT2299 -1.0 -1.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1459 -1.0 -2.5 putative two-component system sensor histidine kinase, no kinase domain (NCBI ptt file) compare
BT0582 -0.9 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT2206 -0.9 -2.1 Zinc ABC transporter, permease (NCBI ptt file) compare
BT0091 -0.9 -2.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0665 -0.9 -1.5 hypothetical protein (NCBI ptt file) compare
BT0259 -0.9 -3.0 putative amidohydrolase (NCBI ptt file) compare
BT0337 -0.9 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT0876 -0.9 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT0984 -0.9 -3.3 hypothetical protein (NCBI ptt file) compare
BT1107 -0.9 -1.7 ferritin A (NCBI ptt file) compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Amylose from potato in Bacteroides thetaiotaomicron VPI-5482

For carbon source Amylose from potato across organisms