Experiment set3IT054 for Pseudomonas fluorescens FW300-N2E2

Compare to:

LB with Doxycycline hyclate 0.0001 mg/ml

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_3856 -3.1 -10.2 Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) conserved
Pf6N2E2_5846 -2.6 -14.9 Nucleoside ABC transporter, periplasmic nucleoside-binding protein conserved
Pf6N2E2_3637 -2.6 -12.9 yqiA-like hydrolase, affects the cell envelope (from data) conserved
Pf6N2E2_2699 -2.5 -8.2 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO conserved
Pf6N2E2_3515 -2.2 -7.8 Probable transmembrane protein compare
Pf6N2E2_5845 -2.1 -6.5 Nucleoside ABC transporter, periplasmic nucleoside-binding protein conserved
Pf6N2E2_4174 -2.1 -11.7 Methionine ABC transporter substrate-binding protein compare
Pf6N2E2_5633 -2.1 -13.7 Aromatic amino acid transport protein AroP compare
Pf6N2E2_2470 -2.0 -10.4 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) compare
Pf6N2E2_2642 -1.8 -8.5 putative patatin-like phospholipase conserved
Pf6N2E2_2845 -1.5 -8.1 RNA polymerase associated protein RapA (EC 3.6.1.-) compare
Pf6N2E2_5961 -1.4 -7.0 Transcriptional regulator, TetR family compare
Pf6N2E2_5235 -1.4 -6.9 Uracil phosphoribosyltransferase (EC 2.4.2.9) compare
Pf6N2E2_3574 -1.1 -7.4 Mannose-6-phosphate isomerase (EC 5.3.1.8) compare
Pf6N2E2_4031 +1.0 8.3 Biofilm PGA outer membrane secretin PgaA conserved
Pf6N2E2_4028 +1.2 8.9 Biofilm PGA synthesis auxiliary protein PgaD conserved
Pf6N2E2_2645 +1.4 5.2 ATP-dependent DNA helicase RecQ compare
Pf6N2E2_757 +1.5 7.4 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) compare
Pf6N2E2_4029 +1.6 8.9 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) conserved
Pf6N2E2_4167 +1.7 9.3 Zinc ABC transporter, ATP-binding protein ZnuC compare
Pf6N2E2_5546 +2.0 13.6 Queuosine Biosynthesis QueC ATPase compare
Pf6N2E2_926 +2.1 6.3 NADH dehydrogenase (EC 1.6.99.3) compare
Pf6N2E2_2886 +2.4 20.8 Phosphogluconate repressor HexR, RpiR family compare
Pf6N2E2_4654 +2.7 5.8 hypothetical protein compare
Pf6N2E2_5525 +4.0 28.4 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases compare
Pf6N2E2_2806 +7.0 33.3 Methyltransferase (EC 2.1.1.-) conserved


Specific phenotypes for stress Doxycycline hyclate across organisms