Experiment set3IT054 for Pseudomonas fluorescens FW300-N2E2
LB with Doxycycline hyclate 0.0001 mg/ml
Group: stressMedia: LB + Doxycycline hyclate (1e-04 mg/ml)
Culturing: pseudo6_N2E2_ML5, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Mark on 3/9/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 1184 E5,E6
Specific Phenotypes
For 26 genes in this experiment
For stress Doxycycline hyclate in Pseudomonas fluorescens FW300-N2E2
For stress Doxycycline hyclate across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Lipopolysaccharide biosynthesis
- Fructose and mannose metabolism
- Benzoxazinone biosynthesis
- Carotenoid biosynthesis - General
- Flavonoid biosynthesis
- Anthocyanin biosynthesis
- Biosynthesis of alkaloids derived from shikimate pathway
- Biosynthesis of plant hormones
- Pentose phosphate pathway
- Ubiquinone and menaquinone biosynthesis
- Oxidative phosphorylation
- Purine metabolism
- Pyrimidine metabolism
- Glycine, serine and threonine metabolism
- Histidine metabolism
- Tyrosine metabolism
- Tryptophan metabolism
- Phenylalanine, tyrosine and tryptophan biosynthesis
- Glutathione metabolism
- N-Glycan biosynthesis
- O-Glycan biosynthesis
- High-mannose type N-glycan biosynthesis
- O-Mannosyl glycan biosynthesis
- Nucleotide sugars metabolism
- Keratan sulfate biosynthesis
- Peptidoglycan biosynthesis
- Glycerolipid metabolism
- Glycosylphosphatidylinositol(GPI)-anchor biosynthesis
- Sphingolipid metabolism
- Glycosphingolipid biosynthesis - lacto and neolacto series
- Glycosphingolipid biosynthesis - globo series
- Glycosphingolipid biosynthesis - ganglio series
- Naphthalene and anthracene degradation
- Folate biosynthesis
- Porphyrin and chlorophyll metabolism
- Diterpenoid biosynthesis
- Zeatin biosynthesis
- Phenylpropanoid biosynthesis
- Flavone and flavonol biosynthesis
- Alkaloid biosynthesis I
- Insect hormone biosynthesis
- Biosynthesis of phenylpropanoids
- Biosynthesis of alkaloids derived from histidine and purine
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: