Experiment set3IT054 for Shewanella loihica PV-4
LB with Polymyxin B sulfate 20 mg/ml
Group: stressMedia: LB + Polymyxin B sulfate (20 mg/ml)
Culturing: PV4_ML1, 48 well microplate; Tecan Infinite F200, Aerobic, at 30 (C), shaken=orbital
By: Adam on 12/11/2013
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 812 E5,E6
Specific Phenotypes
For 9 genes in this experiment
For stress Polymyxin B sulfate in Shewanella loihica PV-4
For stress Polymyxin B sulfate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| LOS core oligosaccharide biosynthesis | 1 |
| Orphan regulatory proteins | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| palmitoleate biosynthesis IV (fungi and animals) | 2 | 1 | 1 |
| oleate biosynthesis II (animals and fungi) | 2 | 1 | 1 |
| ADP-L-glycero-β-D-manno-heptose biosynthesis | 5 | 5 | 1 |
| sorgoleone biosynthesis | 8 | 2 | 1 |