Experiment set3IT054 for Methanococcus maripaludis S2

200 most detrimental genes:

gene	name	fitness	t score	description
MMP_RS01650		+0.7	1.3	sulfurtransferase TusA family protein
MMP_RS08930		+0.7	1.5	hypothetical protein
MMP_RS07345		+0.6	3.4	glycine synthesis protein GlyXL (from data)
MMP_RS06975		+0.5	1.8	sulfide-dependent adenosine diphosphate thiazole synthase
MMP_RS08310		+0.5	2.1	TMEM165/GDT1 family protein
MMP_RS01570		+0.5	1.6	hypothetical protein
MMP_RS07120		+0.4	3.8	coenzyme F420 hydrogenase subunit alpha
MMP_RS00545		+0.4	2.9	XRE family transcriptional regulator
MMP_RS02605		+0.4	0.7	MotA/TolQ/ExbB proton channel family protein
MMP_RS05315		+0.4	1.3	hypothetical protein
MMP_RS05970		+0.4	2.1	class II SORL domain-containing protein
MMP_RS07860		+0.4	0.6	hypothetical protein
MMP_RS03520		+0.4	0.8	YwbE family protein
MMP_RS06155		+0.4	1.8	DUF4186 domain-containing protein
MMP_RS08775		+0.4	2.3	methanogenesis marker 9 domain-containing protein
MMP_RS03300		+0.4	0.6	TOBE domain-containing protein
MMP_RS02410		+0.4	1.6	ABC transporter substrate-binding protein
MMP_RS06540		+0.3	1.4	3-methyl-2-oxobutanoate dehydrogenase subunit VorB
MMP_RS02310		+0.3	1.3	RimK-like ATPgrasp N-terminal domain-containing protein
MMP_RS05985		+0.3	0.9	hypothetical protein
MMP_RS07130		+0.3	2.9	coenzyme F420 hydrogenase subunit gamma
MMP_RS07135		+0.3	2.5	coenzyme F420 hydrogenase subunit beta
MMP_RS00675		+0.3	0.6	nitroreductase family protein
MMP_RS03465		+0.3	0.7	adenine phosphoribosyltransferase
MMP_RS02045		+0.3	1.0	tRNA-Met
MMP_RS08835		+0.3	2.2	H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein
MMP_RS01435		+0.3	1.9	DMT family transporter
MMP_RS06005		+0.3	1.5	heavy-metal-associated domain-containing protein
MMP_RS03340		+0.3	0.5	ABC transporter ATP-binding protein
MMP_RS06930		+0.3	2.2	MBL fold metallo-hydrolase
MMP_RS07095		+0.3	1.1	PspC domain-containing protein
MMP_RS00285		+0.3	2.0	TIGR04013 family B12-binding domain/radical SAM domain-containing protein
MMP_RS04030		+0.3	1.8	hypothetical protein
MMP_RS02745		+0.3	1.1	hypothetical protein
MMP_RS08485		+0.3	2.0	tungstate ABC transporter substrate-binding protein WtpA
MMP_RS07985		+0.3	2.5	nitroreductase family protein
MMP_RS09025		+0.3	0.7	hypothetical protein
MMP_RS08395		+0.3	2.2	DsrE family protein
MMP_RS05945		+0.3	1.7	CBS domain-containing protein
MMP_RS06910		+0.3	2.1	RlmF-related methyltransferase
MMP_RS02370		+0.3	1.5	NifB/NifX family molybdenum-iron cluster-binding protein
MMP_RS07895		+0.3	1.2	cytochrome c
MMP_RS00795		+0.3	2.1	formate dehydrogenase H subunit alpha selenocysteine-containing
MMP_RS08500		+0.3	1.9	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
MMP_RS07805		+0.3	1.6	ABC transporter permease
MMP_RS00665		+0.3	1.5	hypothetical protein
MMP_RS05355		+0.3	0.5	hypothetical protein
MMP_RS08315		+0.3	0.9	S-methyl-5-thioribose-1-phosphate isomerase
MMP_RS05835		+0.3	0.4	secondary thiamine-phosphate synthase enzyme YjbQ
MMP_RS06610		+0.3	1.0	DUF2334 domain-containing protein
MMP_RS08580		+0.2	1.2	flagellin
MMP_RS07850		+0.2	1.4	prephenate dehydratase
MMP_RS08700		+0.2	2.1	hypothetical protein
MMP_RS06560		+0.2	2.1	hypothetical protein
MMP_RS07115		+0.2	1.4	MBL fold metallo-hydrolase
MMP_RS05975		+0.2	0.7	hypothetical protein
MMP_RS03065		+0.2	1.2	AzlC family ABC transporter permease
MMP_RS01630		+0.2	1.8	N-glycosylase/DNA lyase
MMP_RS04740		+0.2	1.5	DUF473 domain-containing protein
MMP_RS04205		+0.2	1.5	carboxymuconolactone decarboxylase family protein
MMP_RS02770		+0.2	1.4	hypothetical protein
MMP_RS07560		+0.2	1.4	prefoldin subunit alpha
MMP_RS08075		+0.2	1.5	DUF749 domain-containing protein
MMP_RS03910		+0.2	0.9	hypothetical protein
MMP_RS07100		+0.2	1.9	hypothetical protein
MMP_RS05790		+0.2	1.3	HDIG domain-containing protein
MMP_RS01855		+0.2	1.7	2-hydroxyacyl-CoA dehydratase family protein
MMP_RS08260		+0.2	1.6	DUF99 family protein
MMP_RS01430		+0.2	1.5	mechanosensitive ion channel family protein
MMP_RS08980		+0.2	1.1	hypothetical protein
MMP_RS02790		+0.2	0.5	class III signal peptide-containing protein
MMP_RS06480		+0.2	1.2	ABC transporter substrate-binding protein
MMP_RS05715		+0.2	1.6	hypothetical protein
MMP_RS06710		+0.2	1.5	selenium-binding protein
MMP_RS07590		+0.2	1.8	hypothetical protein
MMP_RS06655		+0.2	1.5	glycoside hydrolase family 15 protein
MMP_RS08455		+0.2	1.2	multiprotein bridging factor aMBF1
MMP_RS08850		+0.2	1.9	hypothetical protein
MMP_RS08390		+0.2	1.4	DUF5400 domain-containing protein
MMP_RS08205		+0.2	1.6	stage II sporulation protein M
MMP_RS07835		+0.2	0.9	TldD/PmbA family protein
MMP_RS00660		+0.2	1.8	alkaline phosphatase family protein
MMP_RS03890		+0.2	1.3	DUF2540 domain-containing protein
MMP_RS05940		+0.2	1.5	corrinoid protein
MMP_RS08380		+0.2	1.5	phosphatase PAP2 family protein
MMP_RS01065		+0.2	1.7	alpha/beta hydrolase
MMP_RS07925		+0.2	1.4	haloacid dehalogenase
MMP_RS06535		+0.2	0.6	2-oxoacid:acceptor oxidoreductase family protein
MMP_RS07150		+0.2	0.9	MTH895/ArsE family thioredoxin-like protein
MMP_RS01775		+0.2	0.9	TIGR00297 family protein
MMP_RS03220		+0.2	0.6	RNA 2' 3'-cyclic phosphodiesterase
MMP_RS00480		+0.2	1.3	hypothetical protein
MMP_RS01620		+0.2	1.1	hypothetical protein
MMP_RS07970		+0.2	1.0	hypothetical protein
MMP_RS08325		+0.2	1.5	hypothetical protein
MMP_RS09050		+0.2	1.3	CAP domain-containing protein
MMP_RS00865		+0.2	1.1	SLC13 family permease
MMP_RS01120		+0.2	1.3	permease
MMP_RS06165		+0.2	1.5	ABC transporter permease
MMP_RS01090		+0.2	1.4	ABC transporter substrate-binding protein
MMP_RS01685		+0.2	0.9	indolepyruvate oxidoreductase subunit beta
MMP_RS07640		+0.2	1.1	mechanosensitive ion channel family protein
MMP_RS03765		+0.2	1.4	CopG family ribbon-helix-helix protein
MMP_RS08620		+0.2	1.1	flagellar accessory protein FlaH
MMP_RS07840		+0.2	0.9	ribonuclease III
MMP_RS08610		+0.2	1.4	flagellar protein F
MMP_RS05470		+0.2	1.3	DUF523 and DUF1722 domain-containing protein
MMP_RS07155		+0.2	1.4	MFS transporter
MMP_RS08275		+0.2	1.3	hypothetical protein
MMP_RS07770		+0.2	1.3	alanine racemase
MMP_RS04595		+0.2	0.9	hypothetical protein
MMP_RS08160		+0.2	1.2	EamA family transporter
MMP_RS03820		+0.2	1.1	EamA family transporter
MMP_RS08245		+0.2	1.2	DUF4013 domain-containing protein
MMP_RS09060		+0.2	1.4	hypothetical protein
MMP_RS08130		+0.2	1.2	IGHMBP2 family helicase
MMP_RS01980		+0.2	1.5	trimeric intracellular cation channel family protein
MMP_RS08405		+0.2	1.3	MFS transporter
MMP_RS00155		+0.2	1.3	heavy metal-binding domain-containing protein
MMP_RS08250		+0.2	1.3	pyruvate kinase
MMP_RS08175		+0.2	1.2	7-cyano-7-deazaguanine synthase
MMP_RS01945		+0.2	1.2	DUF4350 domain-containing protein
MMP_RS01635		+0.2	1.1	thiamine pyrophosphate-dependent enzyme
MMP_RS08575		+0.2	1.4	hypothetical protein
MMP_RS08625		+0.2	1.3	type II/IV secretion system ATPase subunit
MMP_RS05960		+0.2	1.2	CoB--CoM heterodisulfide reductase subunit B
MMP_RS01105		+0.2	1.1	hypothetical protein
MMP_RS00540		+0.1	1.2	PLP-dependent aminotransferase family protein
MMP_RS09035		+0.1	0.6	hypothetical protein
MMP_RS08630		+0.1	0.9	archaellar assembly protein FlaJ
MMP_RS05275		+0.1	1.2	AI-2E family transporter
MMP_RS06430		+0.1	0.9	6-carboxytetrahydropterin synthase QueD
MMP_RS03215		+0.1	1.2	MBL fold metallo-hydrolase
MMP_RS08415		+0.1	0.7	radical SAM protein
MMP_RS00630		+0.1	1.2	ECF transporter S component
MMP_RS01060		+0.1	1.2	calcium/sodium antiporter
MMP_RS08235		+0.1	0.9	hypothetical protein
MMP_RS03150		+0.1	1.1	phosphoglycerate mutase
MMP_RS05680		+0.1	1.0	phosphate signaling complex protein PhoU
MMP_RS03745		+0.1	1.1	phenylacetate--CoA ligase
MMP_RS00055		+0.1	1.1	DUF2254 domain-containing protein
MMP_RS03830		+0.1	1.2	exodeoxyribonuclease VII large subunit
MMP_RS08265		+0.1	0.8	rubrerythrin
MMP_RS04365		+0.1	1.2	M48 family metallopeptidase
MMP_RS02805		+0.1	0.4	HEPN domain-containing protein
MMP_RS05175		+0.1	0.7	hypothetical protein
MMP_RS07650		+0.1	1.2	TldD/PmbA family protein
MMP_RS06665		+0.1	1.0	glycogen/starch synthase
MMP_RS03790		+0.1	0.9	hypothetical protein
MMP_RS00945		+0.1	0.4	PadR family transcriptional regulator
MMP_RS06150		+0.1	1.1	hypothetical protein
MMP_RS05530		+0.1	1.1	signal peptide peptidase SppA
MMP_RS00565		+0.1	0.7	CBS domain-containing protein
MMP_RS06320		+0.1	1.0	hypothetical protein
MMP_RS06555		+0.1	0.7	cupin domain-containing protein
MMP_RS00690		+0.1	1.0	MBL fold metallo-hydrolase
MMP_RS07855		+0.1	1.0	class I SAM-dependent methyltransferase
MMP_RS08615		+0.1	0.5	flagellar protein G
MMP_RS01940		+0.1	0.8	MoxR family ATPase
MMP_RS01525		+0.1	0.5	nucleoside-diphosphate kinase
MMP_RS03320		+0.1	0.4	metal-dependent transcriptional regulator
MMP_RS04015		+0.1	0.5	hypothetical protein
MMP_RS01320		+0.1	0.6	hypothetical protein
MMP_RS00390		+0.1	1.0	ammonium transporter
MMP_RS07140		+0.1	1.1	TIGR00341 family protein
MMP_RS04060		+0.1	0.7	hypothetical protein
MMP_RS03450		+0.1	0.4	glycine synthesis protein GlyXS (from data)
MMP_RS08750		+0.1	0.8	hypothetical protein
MMP_RS08400		+0.1	0.7	MJ0307 family thioredoxin
MMP_RS06965		+0.1	0.9	TIGR04014 family B12-binding domain/radical SAM domain-containing protein
MMP_RS01580		+0.1	0.7	PQQ-binding-like beta-propeller repeat protein
MMP_RS09065		+0.1	0.9	hypothetical protein
MMP_RS01145		+0.1	1.0	ABC transporter ATP-binding protein
MMP_RS08430		+0.1	0.6	HAD family hydrolase
MMP_RS01975		+0.1	1.0	hypothetical protein
MMP_RS06520		+0.1	0.6	DUF1786 domain-containing protein
MMP_RS02735		+0.1	0.7	MBL fold metallo-hydrolase
MMP_RS02295		+0.1	0.9	TatD family hydrolase
MMP_RS08480		+0.1	1.0	molybdate ABC transporter substrate-binding protein
MMP_RS07675		+0.1	1.1	S-layer protein
MMP_RS07145		+0.1	0.6	AmmeMemoRadiSam system protein B
MMP_RS08640		+0.1	1.0	TIM barrel protein
MMP_RS02845		+0.1	1.0	hypothetical protein
MMP_RS00385		+0.1	0.8	P-II family nitrogen regulator
MMP_RS06045		+0.1	0.9	DNA polymerase
MMP_RS06735		+0.1	0.7	class I SAM-dependent rRNA methyltransferase
MMP_RS06905		+0.1	0.5	hypothetical protein
MMP_RS06065		+0.1	1.0	iron ABC transporter substrate-binding protein
MMP_RS07185		+0.1	0.9	pyridoxal phosphate-dependent aminotransferase
MMP_RS04150		+0.1	0.8	MFS transporter
MMP_RS01965		+0.1	0.6	DUF1616 domain-containing protein
MMP_RS08225		+0.1	0.9	RimK family alpha-L-glutamate ligase
MMP_RS02400		+0.1	1.0	site-2 protease family protein
MMP_RS05235		+0.1	0.9	exodeoxyribonuclease III
MMP_RS03965		+0.1	0.5	hypothetical protein
MMP_RS01460		+0.1	0.4	hypothetical protein
MMP_RS08215		+0.1	0.6	DUF483 domain-containing protein
MMP_RS05995		+0.1	0.8	FprA family A-type flavoprotein
MMP_RS07550		+0.1	0.9	L-serine ammonia-lyase iron-sulfur-dependent subunit alpha
MMP_RS00655		+0.1	0.5	hypothetical protein

Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in rich t1 experiments