Experiment set3IT053 for Methanococcus maripaludis JJ

Compare to:

formate McAA pantothenate dropout

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.7 8.8 hypothetical protein compare
MMJJ_RS05280 +1.0 1.1 hypothetical protein compare
MMJJ_RS07015 +0.8 1.4 PFL family protein compare
MMJJ_RS04005 +0.7 5.3 acetate--CoA ligase family protein compare
MMJJ_RS07025 +0.7 3.9 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS01405 +0.6 0.5 proline--tRNA ligase compare
MMJJ_RS06495 +0.6 1.9 hypothetical protein compare
MMJJ_RS03725 +0.6 2.1 sulfurtransferase TusA family protein compare
MMJJ_RS07235 +0.6 5.1 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS09120 +0.6 1.3 aspartate kinase compare
MMJJ_RS07825 +0.6 3.7 YciI family protein compare
MMJJ_RS05685 +0.6 4.1 class III signal peptide-containing protein compare
MMJJ_RS07240 +0.6 5.0 MBL fold metallo-hydrolase compare
MMJJ_RS07220 +0.6 4.5 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS04545 +0.5 2.4 PadR family transcriptional regulator compare
MMJJ_RS07225 +0.5 4.0 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS03835 +0.5 1.9 DUF504 domain-containing protein compare
MMJJ_RS04955 +0.5 3.4 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS08525 +0.5 2.8 peptidylprolyl isomerase compare
MMJJ_RS07920 +0.5 3.4 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS06210 +0.5 2.6 hypothetical protein compare
MMJJ_RS05915 +0.5 2.0 multiprotein bridging factor aMBF1 compare
MMJJ_RS05525 +0.5 3.4 GTP-binding protein compare
MMJJ_RS05040 +0.5 3.8 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS03070 +0.4 1.5 MetS family NSS transporter small subunit compare
MMJJ_RS01855 +0.4 3.4 MBL fold metallo-hydrolase compare
MMJJ_RS06090 +0.4 2.5 hypothetical protein compare
MMJJ_RS08410 +0.4 1.5 CBS domain-containing protein compare
MMJJ_RS06085 +0.4 2.1 proteasome assembly chaperone family protein compare
MMJJ_RS01825 +0.4 2.5 DNA repair and recombination protein RadB compare
MMJJ_RS06275 +0.4 2.0 hypothetical protein compare
MMJJ_RS01150 +0.4 1.2 hypothetical protein compare
MMJJ_RS06675 +0.4 3.2 TIGR01212 family radical SAM protein compare
MMJJ_RS06580 +0.4 3.1 alanine dehydrogenase compare
MMJJ_RS06540 +0.4 1.6 DUF2120 domain-containing protein compare
MMJJ_RS06190 +0.4 3.2 7-cyano-7-deazaguanine synthase compare
MMJJ_RS04105 +0.4 3.4 prepilin peptidase compare
MMJJ_RS07260 +0.4 2.5 PspC domain-containing protein compare
MMJJ_RS06735 +0.4 2.6 cobalt ECF transporter T component CbiQ compare
MMJJ_RS05410 +0.4 2.1 RecB-family nuclease compare
MMJJ_RS06800 +0.4 2.0 prefoldin subunit alpha compare
MMJJ_RS07010 +0.4 2.1 preprotein translocase subunit Sec61beta compare
MMJJ_RS06640 +0.4 2.5 YfcE family phosphodiesterase compare
MMJJ_RS06950 +0.4 2.5 4-demethylwyosine synthase TYW1 compare
MMJJ_RS06440 +0.4 2.2 DUF4870 domain-containing protein compare
MMJJ_RS04345 +0.4 1.2 DUF2080 family transposase-associated protein compare
MMJJ_RS06810 +0.4 2.9 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06585 +0.4 2.0 alanine racemase compare
MMJJ_RS05980 +0.4 2.5 DUF5400 domain-containing protein compare
MMJJ_RS06205 +0.3 2.7 EamA family transporter compare
MMJJ_RS06500 +0.3 2.2 class I SAM-dependent methyltransferase compare
MMJJ_RS05975 +0.3 2.3 sulfurtransferase TusA family protein compare
MMJJ_RS06710 +0.3 2.8 TldD/PmbA family protein compare
MMJJ_RS06535 +0.3 2.9 UPF0104 family protein compare
MMJJ_RS08515 +0.3 1.3 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS03250 +0.3 1.2 DUF2116 family Zn-ribbon domain-containing protein compare
MMJJ_RS09360 +0.3 2.2 hypothetical protein compare
MMJJ_RS06960 +0.3 2.8 CAP domain-containing protein compare
MMJJ_RS06280 +0.3 2.2 hypothetical protein compare
MMJJ_RS06680 +0.3 1.9 DUF366 family protein compare
MMJJ_RS06120 +0.3 2.3 DUF4013 domain-containing protein compare
MMJJ_RS08455 +0.3 1.8 tetratricopeptide repeat protein compare
MMJJ_RS07230 +0.3 2.0 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS06515 +0.3 2.5 ribonuclease III compare
MMJJ_RS07495 +0.3 2.2 4Fe-4S binding protein compare
MMJJ_RS03905 +0.3 1.7 ATP-binding cassette domain-containing protein compare
MMJJ_RS07915 +0.3 2.0 CBS domain-containing protein compare
MMJJ_RS07210 +0.3 2.4 AmmeMemoRadiSam system protein B compare
MMJJ_RS07270 +0.3 2.2 ribonuclease HII compare
MMJJ_RS07795 +0.3 1.6 cupin domain-containing protein compare
MMJJ_RS06790 +0.3 2.3 nucleotidyltransferase family protein compare
MMJJ_RS06685 +0.3 2.5 S-layer protein compare
MMJJ_RS03375 +0.3 1.3 hypothetical protein compare
MMJJ_RS05700 +0.3 2.0 metallophosphoesterase compare
MMJJ_RS05510 +0.3 2.1 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS06100 +0.3 1.9 rubrerythrin compare
MMJJ_RS06770 +0.3 2.3 hypothetical protein compare
MMJJ_RS01010 +0.3 2.6 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS08830 +0.3 1.0 hypothetical protein compare
MMJJ_RS04500 +0.3 1.9 hypothetical protein compare
MMJJ_RS06080 +0.3 2.0 serine/threonine protein kinase compare
MMJJ_RS05500 +0.3 2.4 hypothetical protein compare
MMJJ_RS07185 +0.3 1.1 DUF371 domain-containing protein compare
MMJJ_RS07610 +0.3 1.9 DUF2119 domain-containing protein compare
MMJJ_RS09050 +0.3 1.2 hypothetical protein compare
MMJJ_RS06470 +0.3 2.1 tripartite tricarboxylate transporter permease compare
MMJJ_RS05580 +0.3 1.6 methanogenesis marker 9 domain-containing protein compare
MMJJ_RS04215 +0.3 2.1 DMT family transporter compare
MMJJ_RS00500 +0.3 1.2 GNAT family N-acetyltransferase compare
MMJJ_RS07445 +0.3 2.0 RlmF-related methyltransferase compare
MMJJ_RS04610 +0.2 1.0 ribosome assembly RNA-binding protein YhbY compare
MMJJ_RS08375 +0.2 1.9 ferritin compare
MMJJ_RS05960 +0.2 1.9 DUF169 domain-containing protein compare
MMJJ_RS06430 +0.2 1.5 haloacid dehalogenase compare
MMJJ_RS05115 +0.2 1.0 P-II family nitrogen regulator compare
MMJJ_RS07760 +0.2 1.4 GNAT family N-acetyltransferase compare
MMJJ_RS06745 +0.2 1.5 energy-coupling factor ABC transporter permease compare
MMJJ_RS08015 +0.2 1.2 HAD family hydrolase compare
MMJJ_RS06460 +0.2 1.5 cytochrome c compare
MMJJ_RS00395 +0.2 1.3 DUF473 domain-containing protein compare
MMJJ_RS07205 +0.2 1.3 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS08705 +0.2 1.5 AEC family transporter compare
MMJJ_RS04375 +0.2 0.6 hypothetical protein compare
MMJJ_RS07365 +0.2 1.8 CatB-related O-acetyltransferase compare
MMJJ_RS05530 +0.2 1.0 roadblock/LC7 domain-containing protein compare
MMJJ_RS07680 +0.2 1.5 glucose-6-phosphate isomerase compare
MMJJ_RS07200 +0.2 1.9 MFS transporter compare
MMJJ_RS04965 +0.2 0.6 RNA polymerase Rpb4 family protein compare
MMJJ_RS06765 +0.2 1.8 hypothetical protein compare
MMJJ_RS01670 +0.2 0.9 hypothetical protein compare
MMJJ_RS07215 +0.2 1.8 TIGR00341 family protein compare
MMJJ_RS05605 +0.2 0.9 hypothetical protein compare
MMJJ_RS07695 +0.2 1.7 glycoside hydrolase family 15 protein compare
MMJJ_RS07765 +0.2 0.8 DMT family protein compare
MMJJ_RS07985 +0.2 1.1 hypothetical protein compare
MMJJ_RS08130 +0.2 0.2 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS05690 +0.2 1.9 hypothetical protein compare
MMJJ_RS05900 +0.2 1.6 ATP-binding cassette domain-containing protein compare
MMJJ_RS08745 +0.2 1.7 glycosyltransferase family 9 protein compare
MMJJ_RS03605 +0.2 0.9 TIGR00297 family protein compare
MMJJ_RS06235 +0.2 1.6 IGHMBP2 family helicase compare
MMJJ_RS03575 +0.2 1.1 NUDIX hydrolase compare
MMJJ_RS01790 +0.2 1.4 pyridoxamine 5'-phosphate oxidase family protein compare
MMJJ_RS01090 +0.2 1.3 hypothetical protein compare
MMJJ_RS06555 +0.2 1.3 ATP-binding cassette domain-containing protein compare
MMJJ_RS08390 +0.2 0.8 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS06450 +0.2 1.5 DUF3343 domain-containing protein compare
MMJJ_RS06550 +0.2 1.5 ABC transporter permease compare
MMJJ_RS09230 +0.2 0.8 hypothetical protein compare
MMJJ_RS03040 +0.2 1.4 lactate utilization protein compare
MMJJ_RS08180 +0.2 1.1 ABC transporter ATP-binding protein compare
MMJJ_RS03850 +0.2 0.8 nucleoside-diphosphate kinase compare
MMJJ_RS08400 +0.2 0.6 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS02265 +0.2 1.4 hypothetical protein compare
MMJJ_RS07890 +0.2 1.0 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS07450 +0.2 0.8 hypothetical protein compare
MMJJ_RS04635 +0.2 1.1 DUF367 family protein compare
MMJJ_RS02160 +0.2 1.3 amino acid ABC transporter permease compare
MMJJ_RS00555 +0.2 1.1 hypothetical protein compare
MMJJ_RS08305 +0.2 1.0 peroxiredoxin compare
MMJJ_RS08370 +0.2 0.8 hypothetical protein compare
MMJJ_RS05660 +0.2 1.1 sulfopyruvate decarboxylase subunit beta compare
MMJJ_RS08100 +0.2 1.0 hypothetical protein compare
MMJJ_RS03805 +0.2 0.7 hypothetical protein compare
MMJJ_RS09005 +0.2 1.6 N-6 DNA methylase compare
MMJJ_RS05990 +0.2 1.2 phosphatase PAP2 family protein compare
MMJJ_RS00845 +0.2 1.1 hypothetical protein compare
MMJJ_RS04915 +0.2 1.3 protein-L-isoaspartate O-methyltransferase compare
MMJJ_RS05355 +0.2 1.2 DUF2121 domain-containing protein compare
MMJJ_RS09205 +0.2 0.8 hypothetical protein compare
MMJJ_RS04525 +0.2 0.6 hypothetical protein compare
MMJJ_RS08165 +0.2 1.1 thermonuclease family protein compare
MMJJ_RS02180 +0.2 1.0 DHH family phosphoesterase compare
MMJJ_RS05340 +0.2 1.3 AAA family ATPase compare
MMJJ_RS00980 +0.2 1.2 flavodoxin family protein compare
MMJJ_RS01910 +0.2 1.4 class III signal peptide-containing protein compare
MMJJ_RS01250 +0.2 0.9 hypothetical protein compare
MMJJ_RS06045 +0.2 1.0 hypothetical protein compare
MMJJ_RS07280 +0.2 1.0 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS02270 +0.2 1.2 HEPN domain-containing protein compare
MMJJ_RS04135 +0.2 0.6 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS00145 +0.2 1.2 aquaporin family protein compare
MMJJ_RS03730 +0.2 1.0 SWIM zinc finger family protein compare
MMJJ_RS07480 +0.2 1.4 FAD-dependent oxidoreductase compare
MMJJ_RS03775 +0.2 0.5 50S ribosomal protein L15e compare
MMJJ_RS02240 +0.2 0.9 CGGC domain-containing protein compare
MMJJ_RS03025 +0.2 1.4 Ig-like domain-containing protein compare
MMJJ_RS06505 +0.2 0.7 prephenate dehydratase compare
MMJJ_RS02285 +0.2 0.7 class III signal peptide-containing protein compare
MMJJ_RS07910 +0.2 1.1 CBS domain-containing protein compare
MMJJ_RS07905 +0.2 1.1 DUF89 domain-containing protein compare
MMJJ_RS06455 +0.2 1.2 YeeE/YedE family protein compare
MMJJ_RS08365 +0.2 1.1 DsrE family protein compare
MMJJ_RS02865 +0.2 1.0 amino acid ABC transporter substrate-binding protein compare
MMJJ_RS01300 +0.2 1.0 MarR family transcriptional regulator compare
MMJJ_RS06740 +0.2 0.8 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS00960 +0.2 0.9 flavodoxin family protein compare
MMJJ_RS06135 +0.2 1.3 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS01430 +0.2 1.0 hypothetical protein compare
MMJJ_RS00150 +0.2 1.0 DUF2180 family protein compare
MMJJ_RS04580 +0.2 1.2 2-phosphosulfolactate phosphatase compare
MMJJ_RS07740 +0.2 1.1 DUF2334 domain-containing protein compare
MMJJ_RS04825 +0.1 1.3 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MMJJ_RS05240 +0.1 1.3 type II secretion system F family protein compare
MMJJ_RS04870 +0.1 0.3 tRNA-Asp compare
MMJJ_RS05390 +0.1 1.2 tRNA pseudouridine(13) synthase TruD compare
MMJJ_RS04920 +0.1 0.9 CBS domain-containing protein compare
MMJJ_RS06445 +0.1 1.2 hypothetical protein compare
MMJJ_RS07855 +0.1 1.2 YkgJ family cysteine cluster protein compare
MMJJ_RS07815 +0.1 1.0 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS02165 +0.1 1.0 ABC transporter substrate-binding protein compare
MMJJ_RS09065 +0.1 0.8 hypothetical protein compare
MMJJ_RS02355 +0.1 1.0 DUF2798 domain-containing protein compare
MMJJ_RS07385 +0.1 1.0 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS05235 +0.1 1.2 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS08210 +0.1 1.4 hypothetical protein compare
MMJJ_RS07790 +0.1 1.0 hypothetical protein compare
MMJJ_RS07255 +0.1 1.2 hypothetical protein compare
MMJJ_RS02970 +0.1 1.1 DUF378 domain-containing protein compare
MMJJ_RS07835 +0.1 0.9 UPF0489 family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments