Experiment set3IT050 for Pseudomonas fluorescens FW300-N2E2
LB with Cephalothin sodium salt 4 mg/ml
Group: stressMedia: LB + Cephalothin sodium salt (4 mg/ml)
Culturing: pseudo6_N2E2_ML5, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Mark on 3/9/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 1184 B1,B2
Specific Phenotypes
For 7 genes in this experiment
For stress Cephalothin sodium salt in Pseudomonas fluorescens FW300-N2E2
For stress Cephalothin sodium salt across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria | 2 |
| Methionine Salvage | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Methionine metabolism
- Geraniol degradation
- Pyruvate metabolism
- 1- and 2-Methylnaphthalene degradation
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| 3-methylthiopropanoate biosynthesis | 1 | 1 | 1 |
| S-methyl-5-thio-α-D-ribose 1-phosphate degradation I | 7 | 2 | 1 |
| L-methionine salvage cycle III | 11 | 5 | 1 |
| L-methionine salvage cycle II (plants) | 11 | 3 | 1 |
| L-methionine salvage cycle I (bacteria and plants) | 12 | 4 | 1 |