Experiment set3IT050 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Glutamine carbon source

200 most important genes:

  gene name fitness t score description  
AO353_12090 -4.2 -2.8 imidazole glycerol phosphate synthase subunit HisF compare
AO353_02070 -3.8 -4.5 prephenate dehydratase compare
AO353_20625 -3.6 -3.5 3-isopropylmalate dehydratase compare
AO353_20665 -3.3 -8.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_26790 -3.3 -8.1 Glutaminase (EC 3.5.1.2) (from data) conserved
AO353_05115 -3.3 -5.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_20695 -3.2 -5.9 O-succinylhomoserine sulfhydrylase compare
AO353_20635 -3.2 -9.9 3-isopropylmalate dehydrogenase compare
AO353_20540 -3.1 -7.1 aromatic amino acid aminotransferase compare
AO353_10670 -3.1 -5.9 shikimate dehydrogenase compare
AO353_07210 -3.1 -5.4 indole-3-glycerol-phosphate synthase compare
AO353_12365 -3.1 -2.9 phosphoribosyl-AMP cyclohydrolase compare
AO353_12070 -3.0 -7.2 imidazoleglycerol-phosphate dehydratase compare
AO353_07220 -3.0 -7.0 anthranilate synthase compare
AO353_14505 -2.9 -9.3 ketol-acid reductoisomerase compare
AO353_08475 -2.9 -5.4 phosphoserine phosphatase compare
AO353_20620 -2.9 -6.7 isopropylmalate isomerase compare
AO353_07230 -2.9 -12.0 anthranilate synthase compare
AO353_08185 -2.9 -7.7 methionine biosynthesis protein MetW compare
AO353_13070 -2.8 -5.7 phosphoserine phosphatase compare
AO353_13165 -2.8 -4.6 ATP phosphoribosyltransferase regulatory subunit compare
AO353_08180 -2.8 -9.6 homoserine O-acetyltransferase compare
AO353_11775 -2.8 -7.8 phosphoenolpyruvate carboxykinase [ATP] compare
AO353_12360 -2.7 -7.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_08345 -2.6 -6.5 dihydroxy-acid dehydratase compare
AO353_02075 -2.6 -8.3 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_05110 -2.6 -9.7 histidinol dehydrogenase compare
AO353_15925 -2.6 -12.3 2-isopropylmalate synthase compare
AO353_14500 -2.5 -4.7 acetolactate synthase 3 regulatory subunit compare
AO353_12075 -2.5 -5.7 imidazole glycerol phosphate synthase subunit HisH compare
AO353_04105 -2.5 -6.0 argininosuccinate synthase compare
AO353_12085 -2.5 -5.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_10710 -2.5 -2.9 tryptophan synthase subunit beta compare
AO353_08780 -2.5 -7.7 5-formyltetrahydrofolate cyclo-ligase compare
AO353_14495 -2.5 -7.3 acetolactate synthase 3 catalytic subunit compare
AO353_09285 -2.4 -10.0 reactive intermediate/imine deaminase compare
AO353_08685 -2.4 -5.3 N-acetylglutamate synthase compare
AO353_19060 -2.4 -4.1 CysB family transcriptional regulator compare
AO353_14400 -2.3 -2.6 Fis family transcriptional regulator compare
AO353_04155 -2.3 -9.4 ornithine carbamoyltransferase compare
AO353_09240 -2.3 -3.0 acetylglutamate kinase compare
AO353_09955 -2.2 -12.3 sodium:alanine symporter conserved
AO353_08510 -2.2 -3.8 3-phosphoglycerate dehydrogenase compare
AO353_12500 -2.2 -1.5 shikimate kinase compare
AO353_07215 -2.2 -6.1 anthranilate phosphoribosyltransferase compare
AO353_05075 -2.1 -8.9 adenylylsulfate kinase compare
AO353_09000 -2.1 -4.3 argininosuccinate lyase compare
AO353_05105 -2.1 -9.2 histidinol-phosphate aminotransferase compare
AO353_12460 -2.0 -6.3 malate dehydrogenase compare
AO353_00430 -2.0 -2.6 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_09945 -2.0 -4.2 LysR family transcriptional regulator compare
AO353_14150 -2.0 -2.5 peptidylprolyl isomerase compare
AO353_07155 -2.0 -5.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_22800 -2.0 -2.9 sulfite reductase compare
AO353_02720 -1.9 -5.9 cysteine synthase compare
AO353_08015 -1.9 -6.0 5,10-methylenetetrahydrofolate reductase compare
AO353_16210 -1.8 -10.7 XRE family transcriptional regulator compare
AO353_03795 -1.8 -3.6 fumarate hydratase compare
AO353_00865 -1.8 -8.1 phosphoenolpyruvate synthase compare
AO353_05080 -1.8 -8.0 sulfate adenylyltransferase compare
AO353_13390 -1.7 -8.1 N-acylglucosamine 2-epimerase compare
AO353_05130 -1.7 -1.8 anti-anti-sigma factor compare
AO353_13100 -1.7 -1.8 GTPase RsgA compare
AO353_14115 -1.6 -5.4 gamma-glutamyl kinase compare
AO353_24130 -1.6 -2.7 hypothetical protein compare
AO353_16940 -1.6 -4.4 deoxycytidine triphosphate deaminase compare
AO353_09890 -1.6 -4.4 phosphate ABC transporter ATP-binding protein compare
AO353_01375 -1.6 -5.2 phosphate acyltransferase compare
AO353_19360 -1.5 -2.5 peroxiredoxin compare
AO353_10705 -1.5 -3.6 tryptophan synthase subunit alpha compare
AO353_00495 -1.5 -2.0 DNA topoisomerase I compare
AO353_24260 -1.5 -2.6 hypothetical protein compare
AO353_06495 -1.5 -4.2 gamma-glutamyl phosphate reductase compare
AO353_14370 -1.4 -4.0 glucose-6-phosphate isomerase compare
AO353_06540 -1.4 -2.4 hypothetical protein compare
AO353_04355 -1.4 -1.7 homoserine dehydrogenase compare
AO353_08165 -1.4 -1.8 pyrroline-5-carboxylate reductase compare
AO353_07355 -1.4 -3.4 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_18715 -1.4 -1.7 histidine kinase compare
AO353_21625 -1.4 -2.7 Fe/S biogenesis protein NfuA compare
AO353_16280 -1.4 -5.3 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 1 (from data) compare
AO353_12115 -1.3 -1.5 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_00650 -1.3 -2.6 cytochrome biogenesis protein compare
AO353_12870 -1.3 -9.1 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
AO353_00750 -1.3 -2.6 GntR family transcriptional regulator compare
AO353_16290 -1.3 -7.0 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, periplasmic substrate-binding component (from data) compare
AO353_07460 -1.3 -2.9 DNA-binding protein compare
AO353_03020 -1.3 -5.2 arginine N-succinyltransferase compare
AO353_02685 -1.2 -2.9 phosphoribosylglycinamide formyltransferase compare
AO353_15185 -1.2 -3.8 ATPase compare
AO353_13640 -1.2 -3.3 histidine kinase compare
AO353_00825 -1.2 -2.8 porin compare
AO353_02975 -1.2 -2.5 aspartate kinase compare
AO353_12420 -1.2 -3.0 predicted FeS cluster maintenance protein (from data) compare
AO353_04565 -1.2 -3.7 nucleoid-associated protein compare
AO353_16285 -1.2 -5.4 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 2 (from data) conserved
AO353_11165 -1.2 -6.2 hypothetical protein compare
AO353_02250 -1.2 -2.2 chorismate synthase compare
AO353_16270 -1.2 -8.4 histidine kinase conserved
AO353_27720 -1.2 -3.9 cupin compare
AO353_27650 -1.2 -3.0 cell division protein FtsK compare
AO353_12345 -1.1 -1.6 twin-arginine protein translocation system subunit TatC compare
AO353_10945 -1.1 -2.7 cytochrome C compare
AO353_19145 -1.1 -3.1 protease HtpX compare
AO353_21615 -1.1 -6.7 methionine synthase compare
AO353_00610 -1.1 -1.9 cytochrome C oxidase Cbb3 compare
AO353_13925 -1.1 -2.1 XRE family transcriptional regulator compare
AO353_16265 -1.1 -4.1 Fis family transcriptional regulator compare
AO353_14940 -1.1 -2.4 malate:quinone oxidoreductase compare
AO353_15250 -1.1 -2.5 cytochrome B compare
AO353_08130 -1.1 -1.8 uracil phosphoribosyltransferase compare
AO353_15725 -1.1 -3.1 hypothetical protein compare
AO353_03590 -1.1 -2.3 crossover junction endodeoxyribonuclease RuvC compare
AO353_06045 -1.1 -3.9 exodeoxyribonuclease V subunit beta compare
AO353_29145 -1.1 -3.1 HxlR family transcriptional regulator compare
AO353_06720 -1.0 -1.9 NrdR family transcriptional regulator compare
AO353_00760 -1.0 -2.2 hypothetical protein compare
AO353_23570 -1.0 -3.1 LysR family transcriptional regulator compare
AO353_03365 -1.0 -4.9 transcriptional regulator compare
AO353_14395 -1.0 -3.1 poly(A) polymerase compare
AO353_16835 -1.0 -1.9 LuxR family transcriptional regulator compare
AO353_06050 -1.0 -3.8 exodeoxyribonuclease V subunit gamma compare
AO353_09135 -1.0 -1.6 cytochrome C compare
AO353_02550 -1.0 -3.1 TetR family transcriptional regulator compare
AO353_08265 -0.9 -3.4 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
AO353_02000 -0.9 -2.7 polysaccharide/polyol phosphate ABC transporter ATP-binding protein compare
AO353_16805 -0.9 -3.1 recombinase RecA compare
AO353_05230 -0.9 -4.9 ribonuclease G compare
AO353_03580 -0.9 -1.6 ATP-dependent DNA helicase RuvB compare
AO353_07935 -0.9 -2.8 hypothetical protein compare
AO353_24425 -0.9 -1.7 amino acid ABC transporter permease compare
AO353_09950 -0.9 -2.7 aspartate ammonia-lyase compare
AO353_10520 -0.9 -3.7 GntR family transcriptional regulator compare
AO353_10780 -0.9 -1.3 DNA-binding protein compare
AO353_23410 -0.9 -1.7 hypothetical protein compare
AO353_13605 -0.9 -5.1 oxidoreductase compare
AO353_04090 -0.9 -1.8 leucyl-tRNA synthetase compare
AO353_17520 -0.9 -2.4 hypothetical protein compare
AO353_17035 -0.9 -2.9 hypothetical protein compare
AO353_03630 -0.9 -5.6 porin compare
AO353_13245 -0.9 -4.3 hypothetical protein compare
AO353_20565 -0.9 -0.9 tRNA-Ala compare
AO353_20340 -0.9 -2.3 gamma-carboxygeranoyl-CoA hydratase compare
AO353_10495 -0.9 -2.1 serine hydroxymethyltransferase compare
AO353_00635 -0.9 -2.3 hypothetical protein compare
AO353_06155 -0.8 -4.6 copper-transporting ATPase compare
AO353_01595 -0.8 -1.4 Flp pilus assembly protein CpaB compare
AO353_02465 -0.8 -1.5 hypothetical protein compare
AO353_05415 -0.8 -1.4 hypothetical protein compare
AO353_07445 -0.8 -1.4 pyrroloquinoline quinone biosynthesis protein PqqD compare
AO353_15385 -0.8 -1.9 hypothetical protein compare
AO353_04520 -0.8 -2.6 elongation factor 4 compare
AO353_17410 -0.8 -1.5 arylsulfate sulfotransferase compare
AO353_13155 -0.8 -2.2 hypothetical protein compare
AO353_04325 -0.8 -1.5 hypothetical protein compare
AO353_11530 -0.8 -4.1 diguanylate cyclase compare
AO353_28380 -0.8 -2.2 GntR family transcriptional regulator compare
AO353_07315 -0.8 -1.5 rRNA methyltransferase compare
AO353_10505 -0.8 -2.3 hypothetical protein compare
AO353_14595 -0.8 -4.0 carbonate dehydratase compare
AO353_10515 -0.8 -4.7 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_01220 -0.8 -1.6 hypothetical protein compare
AO353_17855 -0.8 -1.6 ribonuclease D compare
AO353_09260 -0.8 -3.3 ribonuclease PH compare
AO353_24595 -0.8 -1.7 hypothetical protein compare
AO353_22920 -0.8 -2.6 GntR family transcriptional regulator compare
AO353_22600 -0.8 -1.5 hypothetical protein compare
AO353_22415 -0.8 -2.2 alcohol dehydrogenase compare
AO353_14405 -0.8 -5.1 ATPase compare
AO353_15785 -0.8 -4.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
AO353_12510 -0.8 -5.0 cell division protein compare
AO353_17675 -0.8 -2.6 hypothetical protein compare
AO353_14585 -0.7 -2.7 ribosomal-protein-alanine acetyltransferase compare
AO353_09785 -0.7 -1.7 hypothetical protein compare
AO353_13220 -0.7 -3.2 hypothetical protein compare
AO353_12930 -0.7 -1.9 GlcNAc-PI de-N-acetylase compare
AO353_06455 -0.7 -1.5 D-alanyl-D-alanine carboxypeptidase compare
AO353_15395 -0.7 -2.0 transcriptional regulator compare
AO353_24745 -0.7 -0.9 hypothetical protein compare
AO353_07075 -0.7 -2.1 elongation factor Tu compare
AO353_17450 -0.7 -2.9 hypothetical protein compare
AO353_07940 -0.7 -2.6 hypothetical protein compare
AO353_14775 -0.7 -2.5 hypothetical protein compare
AO353_05690 -0.7 -1.6 SsrA-binding protein compare
AO353_18890 -0.7 -2.4 cytochrome C compare
AO353_06160 -0.7 -2.4 transcriptional regulator compare
AO353_01915 -0.7 -1.0 GlcG protein compare
AO353_19750 -0.7 -1.2 diaminopimelate epimerase compare
AO353_27380 -0.7 -1.0 pyocin R2, holin compare
AO353_28815 -0.7 -1.6 hypothetical protein compare
AO353_04190 -0.7 -1.3 glycerol-3-phosphate dehydrogenase compare
AO353_09560 -0.7 -1.1 type VI secretion protein compare
AO353_22025 -0.7 -1.3 iron-sulfur cluster repair di-iron protein compare
AO353_06750 -0.7 -2.1 methionine ABC transporter ATP-binding protein compare
AO353_12650 -0.7 -0.9 hypothetical protein compare
AO353_27995 -0.7 -2.3 RpiR family transcriptional regulator compare
AO353_20630 -0.7 -3.8 SAM-dependent methyltransferase compare
AO353_03870 -0.7 -2.2 LysR family transcriptional regulator compare
AO353_20175 -0.7 -1.3 ATP-dependent Clp protease proteolytic subunit compare
AO353_27925 -0.7 -1.1 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source L-Glutamine in Pseudomonas fluorescens FW300-N2E3

For carbon source L-Glutamine across organisms