Experiment set3IT050 for Methanococcus maripaludis JJ

200 most detrimental genes:

gene	name	fitness	t score	description
MMJJ_RS04415		+2.4	9.1	hypothetical protein
MMJJ_RS03725		+0.9	3.8	sulfurtransferase TusA family protein
MMJJ_RS08130		+0.7	0.8	translation initiation factor IF-2 subunit gamma
MMJJ_RS04005		+0.7	5.6	acetate--CoA ligase family protein
MMJJ_RS04955		+0.7	4.3	tRNA pseudouridine(54/55) synthase Pus10
MMJJ_RS06800		+0.6	4.3	prefoldin subunit alpha
MMJJ_RS07235		+0.6	4.9	coenzyme F420 hydrogenase subunit alpha
MMJJ_RS03250		+0.5	1.7	DUF2116 family Zn-ribbon domain-containing protein
MMJJ_RS05685		+0.5	3.0	class III signal peptide-containing protein
MMJJ_RS08830		+0.5	2.2	hypothetical protein
MMJJ_RS07015		+0.5	0.7	PFL family protein
MMJJ_RS07230		+0.5	3.1	coenzyme F420-reducing hydrogenase, FrhD protein
MMJJ_RS07240		+0.5	4.5	MBL fold metallo-hydrolase
MMJJ_RS07795		+0.5	2.8	cupin domain-containing protein
MMJJ_RS06210		+0.5	2.8	hypothetical protein
MMJJ_RS06680		+0.5	2.9	DUF366 family protein
MMJJ_RS01855		+0.5	3.7	MBL fold metallo-hydrolase
MMJJ_RS07220		+0.5	3.7	coenzyme F420 hydrogenase subunit beta
MMJJ_RS06675		+0.5	3.6	TIGR01212 family radical SAM protein
MMJJ_RS07920		+0.4	3.1	6-carboxytetrahydropterin synthase QueD
MMJJ_RS07025		+0.4	2.8	tRNA (cytidine(56)-2'-O)-methyltransferase
MMJJ_RS03605		+0.4	1.8	TIGR00297 family protein
MMJJ_RS08485		+0.4	2.2	Lrp/AsnC family transcriptional regulator
MMJJ_RS07225		+0.4	3.0	coenzyme F420 hydrogenase subunit gamma
MMJJ_RS04105		+0.4	3.5	prepilin peptidase
MMJJ_RS06470		+0.4	2.8	tripartite tricarboxylate transporter permease
MMJJ_RS07985		+0.4	1.9	hypothetical protein
MMJJ_RS09300		+0.4	1.2	hypothetical protein
MMJJ_RS04545		+0.4	1.5	PadR family transcriptional regulator
MMJJ_RS08100		+0.4	2.5	hypothetical protein
MMJJ_RS06665		+0.4	2.0	DUF3236 domain-containing protein
MMJJ_RS07270		+0.4	2.6	ribonuclease HII
MMJJ_RS06770		+0.4	3.2	hypothetical protein
MMJJ_RS06275		+0.4	1.9	hypothetical protein
MMJJ_RS06950		+0.4	2.8	4-demethylwyosine synthase TYW1
MMJJ_RS05580		+0.4	2.8	methanogenesis marker 9 domain-containing protein
MMJJ_RS08225		+0.4	1.4	peptidylprolyl isomerase
MMJJ_RS06515		+0.4	2.7	ribonuclease III
MMJJ_RS07810		+0.4	2.2	3-methyl-2-oxobutanoate dehydrogenase subunit VorB
MMJJ_RS07010		+0.4	2.1	preprotein translocase subunit Sec61beta
MMJJ_RS05040		+0.4	2.4	7-carboxy-7-deazaguanine synthase QueE
MMJJ_RS07280		+0.3	2.0	phosphomannomutase/phosphoglucomutase
MMJJ_RS01670		+0.3	1.6	hypothetical protein
MMJJ_RS06505		+0.3	1.2	prephenate dehydratase
MMJJ_RS03070		+0.3	1.2	MetS family NSS transporter small subunit
MMJJ_RS03805		+0.3	1.3	hypothetical protein
MMJJ_RS07800		+0.3	2.7	AMP-binding protein
MMJJ_RS02665		+0.3	0.9	methyl-accepting chemotaxis protein
MMJJ_RS08705		+0.3	2.4	AEC family transporter
MMJJ_RS05520		+0.3	2.6	H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein
MMJJ_RS09065		+0.3	1.9	hypothetical protein
MMJJ_RS07740		+0.3	2.3	DUF2334 domain-containing protein
MMJJ_RS06790		+0.3	2.8	nucleotidyltransferase family protein
MMJJ_RS06740		+0.3	1.6	energy-coupling factor ABC transporter substrate-binding protein
MMJJ_RS03515		+0.3	2.2	GPR1/FUN34/YaaH family transporter
MMJJ_RS06440		+0.3	2.4	DUF4870 domain-containing protein
MMJJ_RS06500		+0.3	2.0	class I SAM-dependent methyltransferase
MMJJ_RS02180		+0.3	1.6	DHH family phosphoesterase
MMJJ_RS06735		+0.3	2.0	cobalt ECF transporter T component CbiQ
MMJJ_RS08455		+0.3	2.2	tetratricopeptide repeat protein
MMJJ_RS06535		+0.3	2.4	UPF0104 family protein
MMJJ_RS07680		+0.3	2.2	glucose-6-phosphate isomerase
MMJJ_RS08410		+0.3	1.2	CBS domain-containing protein
MMJJ_RS08315		+0.3	2.2	DNA protection protein DPS
MMJJ_RS05510		+0.3	2.2	archaellum operon transcriptional activator EarA family protein
MMJJ_RS07915		+0.3	1.5	CBS domain-containing protein
MMJJ_RS06810		+0.3	2.3	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
MMJJ_RS06745		+0.3	2.1	energy-coupling factor ABC transporter permease
MMJJ_RS08240		+0.3	1.9	L-fuculose phosphate aldolase
MMJJ_RS07260		+0.3	1.7	PspC domain-containing protein
MMJJ_RS02270		+0.3	1.2	HEPN domain-containing protein
MMJJ_RS05975		+0.3	1.8	sulfurtransferase TusA family protein
MMJJ_RS07805		+0.3	1.3	ferredoxin family protein
MMJJ_RS01265		+0.3	1.5	cupin domain-containing protein
MMJJ_RS07005		+0.3	1.4	transcription factor S
MMJJ_RS06460		+0.3	1.7	cytochrome c
MMJJ_RS08525		+0.3	1.3	peptidylprolyl isomerase
MMJJ_RS06585		+0.3	1.8	alanine racemase
MMJJ_RS07835		+0.3	1.8	UPF0489 family protein
MMJJ_RS07210		+0.3	2.1	AmmeMemoRadiSam system protein B
MMJJ_RS07890		+0.3	1.7	pyrimidine dimer DNA glycosylase/endonuclease V
MMJJ_RS00150		+0.3	1.6	DUF2180 family protein
MMJJ_RS04580		+0.3	1.9	2-phosphosulfolactate phosphatase
MMJJ_RS06710		+0.3	2.1	TldD/PmbA family protein
MMJJ_RS01010		+0.3	2.4	right-handed parallel beta-helix repeat-containing protein
MMJJ_RS03835		+0.2	1.3	DUF504 domain-containing protein
MMJJ_RS06190		+0.2	1.9	7-cyano-7-deazaguanine synthase
MMJJ_RS09295		+0.2	0.3	hypothetical protein
MMJJ_RS05500		+0.2	2.3	hypothetical protein
MMJJ_RS05505		+0.2	2.3	hypothetical protein
MMJJ_RS06090		+0.2	1.3	hypothetical protein
MMJJ_RS01955		+0.2	2.0	hypothetical protein
MMJJ_RS06685		+0.2	2.1	S-layer protein
MMJJ_RS09390		+0.2	0.5	hypothetical protein
MMJJ_RS00615		+0.2	1.3	nucleoside deaminase
MMJJ_RS08515		+0.2	0.8	secondary thiamine-phosphate synthase enzyme YjbQ
MMJJ_RS06120		+0.2	1.6	DUF4013 domain-containing protein
MMJJ_RS06205		+0.2	1.7	EamA family transporter
MMJJ_RS01300		+0.2	1.3	MarR family transcriptional regulator
MMJJ_RS05980		+0.2	1.5	DUF5400 domain-containing protein
MMJJ_RS05690		+0.2	2.1	hypothetical protein
MMJJ_RS04215		+0.2	1.9	DMT family transporter
MMJJ_RS05605		+0.2	1.1	hypothetical protein
MMJJ_RS09360		+0.2	1.5	hypothetical protein
MMJJ_RS03040		+0.2	1.5	lactate utilization protein
MMJJ_RS05355		+0.2	1.7	DUF2121 domain-containing protein
MMJJ_RS07495		+0.2	1.3	4Fe-4S binding protein
MMJJ_RS09005		+0.2	1.9	N-6 DNA methylase
MMJJ_RS05400		+0.2	1.3	CoA-binding protein
MMJJ_RS06520		+0.2	1.6	TldD/PmbA family protein
MMJJ_RS06580		+0.2	1.6	alanine dehydrogenase
MMJJ_RS06960		+0.2	1.9	CAP domain-containing protein
MMJJ_RS03360		+0.2	0.2	hypothetical protein
MMJJ_RS06130		+0.2	1.0	hypothetical protein
MMJJ_RS07450		+0.2	1.1	hypothetical protein
MMJJ_RS04610		+0.2	1.0	ribosome assembly RNA-binding protein YhbY
MMJJ_RS05915		+0.2	0.7	multiprotein bridging factor aMBF1
MMJJ_RS05390		+0.2	1.6	tRNA pseudouridine(13) synthase TruD
MMJJ_RS06495		+0.2	1.0	hypothetical protein
MMJJ_RS01435		+0.2	1.6	4Fe-4S binding protein
MMJJ_RS09365		+0.2	0.5	hypothetical protein
MMJJ_RS05960		+0.2	1.5	DUF169 domain-containing protein
MMJJ_RS07445		+0.2	1.4	RlmF-related methyltransferase
MMJJ_RS07815		+0.2	1.5	2-oxoacid:acceptor oxidoreductase family protein
MMJJ_RS06765		+0.2	1.7	hypothetical protein
MMJJ_RS07480		+0.2	1.7	FAD-dependent oxidoreductase
MMJJ_RS04220		+0.2	1.3	helix-turn-helix transcriptional regulator
MMJJ_RS04715		+0.2	0.9	hypothetical protein
MMJJ_RS02230		+0.2	1.6	hypothetical protein
MMJJ_RS01515		+0.2	0.9	DUF2178 domain-containing protein
MMJJ_RS08305		+0.2	1.1	peroxiredoxin
MMJJ_RS05700		+0.2	1.4	metallophosphoesterase
MMJJ_RS02240		+0.2	0.8	CGGC domain-containing protein
MMJJ_RS00145		+0.2	1.4	aquaporin family protein
MMJJ_RS07855		+0.2	1.4	YkgJ family cysteine cluster protein
MMJJ_RS04135		+0.2	0.8	7-cyano-7-deazaguanine synthase QueC
MMJJ_RS07865		+0.2	1.2	zinc ribbon domain-containing protein
MMJJ_RS07820		+0.2	1.3	bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
MMJJ_RS05660		+0.2	1.0	sulfopyruvate decarboxylase subunit beta
MMJJ_RS08165		+0.2	1.1	thermonuclease family protein
MMJJ_RS03375		+0.2	1.1	hypothetical protein
MMJJ_RS07215		+0.2	1.5	TIGR00341 family protein
MMJJ_RS08300		+0.2	1.4	hypothetical protein
MMJJ_RS06540		+0.2	1.0	DUF2120 domain-containing protein
MMJJ_RS02340		+0.2	1.0	SAM-dependent methyltransferase
MMJJ_RS04375		+0.2	0.5	hypothetical protein
MMJJ_RS09335		+0.2	0.8	hypothetical protein
MMJJ_RS06085		+0.2	0.8	proteasome assembly chaperone family protein
MMJJ_RS01835		+0.2	1.4	tRNA pseudouridine(13) synthase TruD
MMJJ_RS03775		+0.2	0.5	50S ribosomal protein L15e
MMJJ_RS07200		+0.2	1.4	MFS transporter
MMJJ_RS06280		+0.2	1.3	hypothetical protein
MMJJ_RS08045		+0.2	1.4	transporter substrate-binding domain-containing protein
MMJJ_RS02160		+0.2	1.1	amino acid ABC transporter permease
MMJJ_RS04965		+0.2	0.5	RNA polymerase Rpb4 family protein
MMJJ_RS07765		+0.2	0.7	DMT family protein
MMJJ_RS05410		+0.2	1.0	RecB-family nuclease
MMJJ_RS07830		+0.2	1.2	DUF1786 domain-containing protein
MMJJ_RS06640		+0.2	1.1	YfcE family phosphodiesterase
MMJJ_RS08375		+0.2	1.2	ferritin
MMJJ_RS08580		+0.2	0.9	YkgJ family cysteine cluster protein
MMJJ_RS02335		+0.2	1.4	ABC transporter substrate-binding protein
MMJJ_RS02115		+0.2	1.1	class I SAM-dependent methyltransferase family protein
MMJJ_RS05790		+0.2	1.2	flagellin
MMJJ_RS01825		+0.2	0.8	DNA repair and recombination protein RadB
MMJJ_RS01800		+0.2	1.2	ADP-ribosylglycohydrolase family protein
MMJJ_RS02865		+0.2	1.1	amino acid ABC transporter substrate-binding protein
MMJJ_RS06455		+0.2	1.2	YeeE/YedE family protein
MMJJ_RS03905		+0.2	0.8	ATP-binding cassette domain-containing protein
MMJJ_RS04350		+0.2	0.6	hypothetical protein
MMJJ_RS07595		+0.2	0.9	hypothetical protein
MMJJ_RS00500		+0.2	0.6	GNAT family N-acetyltransferase
MMJJ_RS01590		+0.2	0.4	adenine phosphoribosyltransferase
MMJJ_RS05335		+0.2	1.0	heavy metal-binding domain-containing protein
MMJJ_RS08810		+0.1	0.2	DUF4040 domain-containing protein
MMJJ_RS05750		+0.1	1.1	flagellar accessory protein FlaH
MMJJ_RS01795		+0.1	1.1	TIGR00266 family protein
MMJJ_RS07685		+0.1	1.2	glycogen/starch synthase
MMJJ_RS05530		+0.1	0.5	roadblock/LC7 domain-containing protein
MMJJ_RS02010		+0.1	1.0	MBL fold metallo-hydrolase
MMJJ_RS07365		+0.1	1.1	CatB-related O-acetyltransferase
MMJJ_RS01125		+0.1	0.6	hypothetical protein
MMJJ_RS04180		+0.1	0.4	metalloregulator ArsR/SmtB family transcription factor
MMJJ_RS02355		+0.1	1.0	DUF2798 domain-containing protein
MMJJ_RS00155		+0.1	1.2	DUF2193 domain-containing protein
MMJJ_RS03025		+0.1	1.2	Ig-like domain-containing protein
MMJJ_RS00785		+0.1	0.4	hypothetical protein
MMJJ_RS04345		+0.1	0.4	DUF2080 family transposase-associated protein
MMJJ_RS08040		+0.1	1.1	NAD(P)/FAD-dependent oxidoreductase
MMJJ_RS08665		+0.1	1.2	transcriptional regulator
MMJJ_RS08350		+0.1	1.2	heavy metal translocating P-type ATPase
MMJJ_RS07695		+0.1	1.2	glycoside hydrolase family 15 protein
MMJJ_RS09120		+0.1	0.2	aspartate kinase
MMJJ_RS00810		+0.1	1.0	GTP-binding protein
MMJJ_RS01380		+0.1	0.9	DUF1890 domain-containing protein
MMJJ_RS04825		+0.1	1.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase
MMJJ_RS08215		+0.1	1.0	radical SAM protein
MMJJ_RS03045		+0.1	1.0	hypothetical protein
MMJJ_RS05365		+0.1	0.7	DUF2798 domain-containing protein
MMJJ_RS08210		+0.1	1.3	hypothetical protein

Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments