Experiment set3IT047 for Caulobacter crescentus NA1000

Compare to:

PYE with Benzalkonium Chloride 0.0001 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01453 +4.4 11.3 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_01059 +4.2 35.3 S-layer protein rsaA compare
CCNA_01712 +4.2 33.6 CopY/TcrY family transcriptional repressor compare
CCNA_02387 +4.1 31.9 glutathione reductase compare
CCNA_00162 +4.0 15.7 hypothetical protein compare
CCNA_01979 +4.0 25.4 LexA repressor compare
CCNA_03718 +4.0 23.3 NADH-ubiquinone oxidoreductase subunit compare
CCNA_00161 +3.8 32.0 hypothetical protein compare
CCNA_03858 +3.8 28.8 protein translocase subunit secB compare
CCNA_00769 +3.8 14.5 TetR family transcriptional regulator compare
CCNA_01324 +3.8 19.0 LSU ribosomal protein L30P compare
CCNA_02037 +3.7 26.9 ATP-dependent endopeptidase Lon compare
CCNA_03012 +3.7 18.6 peroxiredoxin compare
CCNA_03043 +3.7 12.1 type IV pilin protein pilA compare
CCNA_01815 +3.7 26.4 nitrogen assimilation regulatory protein NtrC compare
CCNA_01061 +3.7 14.7 type I secretion adaptor protein RsaE compare
CCNA_01525 +3.7 18.1 flagellar biosynthesis repressor flbT compare
CCNA_01058 +3.7 22.3 helix-turn-helix transcriptional regulator compare
CCNA_03030 +3.6 22.4 cytochrome c2 compare
CCNA_03519 +3.6 22.1 PadR-family transcriptional regulator compare
CCNA_02980 +3.6 22.3 tryptophan 2,3-dioxygenase compare
CCNA_03064 +3.6 22.3 PadR-family transcriptional regulator compare
CCNA_00924 +3.6 23.1 MarR/EmrR family transcriptional regulator compare
CCNA_02000 +3.5 8.2 SSU ribosomal protein S2P compare
CCNA_03252 +3.5 24.2 CopY/TcrY-family transcriptional regulator compare
CCNA_01060 +3.5 19.8 type I protein secretion ATP-binding protein RsaD compare
CCNA_02419 +3.5 11.2 TonB1 protein compare
CCNA_01814 +3.5 21.8 nitrogen regulation protein ntrB compare
CCNA_02242 +3.4 25.1 PHB granule-associated protein, phasin2 compare
CCNA_02957 +3.4 14.2 ArsR-family transcriptional regulator compare
CCNA_00699 +3.4 19.5 LSU ribosomal protein L28P compare
CCNA_03287 +3.4 27.3 PadR-family transcriptional regulator compare
CCNA_02103 +3.4 22.8 hypothetical protein compare
CCNA_03289 +3.4 24.8 HicB-family RNA-binding protein compare
CCNA_00939 +3.3 14.3 MarR-family transcriptional regulator compare
CCNA_03271 +3.3 22.9 methionine gamma-lyase compare
CCNA_00684 +3.3 18.6 anti-sigma factor, ChrR-family compare
CCNA_01968 +3.3 10.3 pentapeptide repeats containing protein compare
CCNA_00505 +3.3 14.6 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_03805 +3.3 21.4 PadR-family transcriptional regulator compare
CCNA_02732 +3.3 6.6 hypothetical protein compare
CCNA_01851 +3.3 24.8 quinol cytochrome oxidase polypeptide II compare
CCNA_01964 +3.3 7.2 NADH dehydrogenase compare
CCNA_01526 +3.3 13.0 flagellar biosynthesis regulatory protein flaF compare
CCNA_00811 +3.3 17.0 TetR-family transcriptional regulator compare
CCNA_02448 +3.3 13.6 hypothetical protein compare
CCNA_00962 +3.3 18.4 MarR-family transcriptional regulator compare
CCNA_01094 +3.2 7.7 hypothetical protein compare
CCNA_00518 +3.2 20.4 LSU ribosomal protein L25P compare
CCNA_01361 +3.2 7.7 PepSY superfamily protein compare
CCNA_02289 +3.2 28.3 MarR/EmrR family transcriptional regulator compare
CCNA_R0037 +3.2 5.2 tRNA-Glu compare
CCNA_01420 +3.1 12.4 NrdR family transcriptional regulator compare
CCNA_02225 +3.1 16.4 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_03498 +3.1 20.9 MarR-family transcriptional regulator compare
CCNA_00163 +3.1 17.8 exopolysaccharide transport family protein compare
CCNA_02447 +3.1 15.1 PspA/IM30 family regulatory protein compare
CCNA_00521 +3.1 5.1 antitoxin protein compare
CCNA_02910 +3.1 24.4 TonB-dependent receptor compare
CCNA_02591 +3.1 19.2 glutaredoxin compare
CCNA_00999 +3.1 12.8 PAS-family motility and cell cycle regulatory protein MopJ compare
CCNA_03479 +3.0 17.7 MarR-family transcriptional regulator compare
CCNA_03936 +3.0 11.8 hypothetical protein compare
CCNA_03989 +3.0 23.1 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_00846 +3.0 24.7 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_00954 +3.0 20.9 AAA-family response regulator flbD compare
CCNA_00028 +3.0 13.9 TonB-dependent receptor compare
CCNA_01942 +3.0 14.6 Rrf2 family protein compare
CCNA_01751 +3.0 11.3 aminodeoxychorismate lyase compare
CCNA_02646 +2.9 7.0 cell division protein MraZ compare
CCNA_01684 +2.9 16.3 phenylalanine-4-hydroxylase compare
CCNA_03612 +2.9 20.1 HTH XRE-family transcriptional regulator compare
CCNA_01931 +2.9 17.2 TetR-family transcriptional regulator compare
CCNA_03280 +2.9 24.5 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_01722 +2.9 6.0 hypothetical protein compare
CCNA_03689 +2.9 18.7 alanine dehydrogenase compare
CCNA_01063 +2.9 12.5 UDP-perosamine 4-acetyl transferase compare
CCNA_01840 +2.9 21.5 MerR-family transcriptional regulator compare
CCNA_00168 +2.9 20.2 polysaccharide export protein compare
CCNA_01923 +2.9 14.9 ATP-dependent RNA helicase compare
CCNA_03062 +2.9 15.7 cell wall hydrolase family protein compare
CCNA_00944 +2.8 14.4 flagellar hook length determination protein compare
CCNA_01848 +2.8 19.5 quinol cytochrome oxidase polypeptide IV compare
CCNA_00354 +2.8 13.8 NlpC/P60 CHAP domain amidase protein compare
CCNA_01780 +2.8 16.3 exopolyphosphatase compare
CCNA_03129 +2.8 16.4 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01573 +2.8 13.2 ArsR-family transcriptional regulator compare
CCNA_01849 +2.8 17.3 quinol cytochrome oxidase polypeptide III compare
CCNA_03379 +2.8 5.2 Cro/CI family transcriptional regulator compare
CCNA_03325 +2.8 11.1 hypothetical protein compare
CCNA_02836 +2.7 12.4 hypothetical protein compare
CCNA_00947 +2.7 19.6 flagellar hook protein FlgE compare
CCNA_01186 +2.7 11.2 hypothetical protein compare
CCNA_01850 +2.7 20.1 quinol cytochrome oxidase polypeptide I compare
CCNA_02617 +2.7 19.8 histidinol-phosphate aminotransferase compare
CCNA_03464 +2.7 14.0 glycine cleavage system H protein compare
CCNA_02127 +2.7 15.9 oxacillin resistance-associated protein fmtC compare
CCNA_02339 +2.6 15.4 methyltransferase compare
CCNA_02644 +2.6 8.0 cell division protein FtsL compare
CCNA_00756 +2.6 4.1 hypothetical protein compare
CCNA_00215 +2.6 12.7 SapC surface layer protein compare
CCNA_02941 +2.6 9.6 transcription elongation factor greA compare
CCNA_02575 +2.6 6.2 hypothetical protein compare
CCNA_01008 +2.6 18.8 urocanate hydratase compare
CCNA_00031 +2.6 13.1 toxin protein VapC compare
CCNA_01181 +2.6 13.1 hypothetical protein compare
CCNA_00945 +2.6 14.4 chemotaxis protein MotD compare
CCNA_03863 +2.6 6.9 hypothetical protein compare
CCNA_01790 +2.6 11.0 protein translocase subunit secG compare
CCNA_00803 +2.6 9.4 chemotaxis protein cheW compare
CCNA_03951 +2.6 8.5 hypothetical protein compare
CCNA_03123 +2.6 15.8 ArsR-family transcriptional regulator compare
CCNA_02081 +2.6 11.7 Sec-independent protein translocase protein tatB compare
CCNA_00011 +2.5 8.3 chaperone protein DnaJ compare
CCNA_00527 +2.5 14.6 hypothetical protein compare
CCNA_02616 +2.5 17.3 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_03518 +2.5 19.1 cytochrome c oxidase polypeptide II coxB compare
CCNA_00998 +2.5 11.2 ROS/MUCR transcriptional regulator compare
CCNA_02075 +2.5 3.2 peptidoglycan binding endopeptidase DipM compare
CCNA_02416 +2.5 13.9 DNA-binding protein HU compare
CCNA_03420 +2.5 10.8 hypothetical protein compare
CCNA_00027 +2.5 5.2 2OG-Fe(II) oxygenase compare
CCNA_01393 +2.5 16.1 soluble lytic murein transglycosylase compare
CCNA_00447 +2.5 13.4 chemotaxis protein cheD compare
CCNA_01242 +2.5 15.5 amino acid permease compare
CCNA_02328 +2.5 2.5 cell cycle regulatory protein GcrA compare
CCNA_00497 +2.5 15.2 putative rhamnosyl transferase compare
CCNA_03938 +2.5 7.8 hypothetical protein compare
CCNA_01235 +2.5 11.3 AcrR-family transcriptional regulator compare
CCNA_00950 +2.5 17.1 flagellar M-ring protein FliF compare
CCNA_00032 +2.5 7.5 antitoxin protein VapB compare
CCNA_00920 +2.4 8.3 hypothetical protein compare
CCNA_02073 +2.4 8.1 cupin domain transcriptional regulator compare
CCNA_03643 +2.4 3.6 succinate dehydrogenase membrane anchor subunit compare
CCNA_03391 +2.4 13.0 Cro/CI family transcriptional regulator compare
CCNA_01913 +2.4 16.9 MarR-family transcriptional regulator compare
CCNA_01801 +2.4 10.0 hypothetical protein compare
CCNA_02316 +2.4 13.2 hypothetical protein compare
CCNA_02619 +2.4 15.9 stomatin/prohibitin-related protein compare
CCNA_00919 +2.4 9.3 hypothetical protein compare
CCNA_03893 +2.4 5.7 hypothetical protein compare
CCNA_03681 +2.4 13.3 ABC transporter ATP-binding protein compare
CCNA_03089 +2.4 12.2 hypothetical protein compare
CCNA_01802 +2.4 5.6 hypothetical protein compare
CCNA_02315 +2.4 8.1 Cro/CI-family transcriptional regulator compare
CCNA_03108 +2.4 18.4 TonB-dependent outer membrane receptor compare
CCNA_01553 +2.4 11.1 undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase compare
CCNA_01066 +2.4 15.4 glycosyltransferase compare
CCNA_00375 +2.4 8.9 hypothetical protein compare
CCNA_02021 +2.3 5.4 hypothetical protein compare
CCNA_02324 +2.3 11.6 heat shock protein 33 hsp33 compare
CCNA_00149 +2.3 5.5 Cro/CI-family transcriptional regulator compare
CCNA_01064 +2.3 12.8 perosamine synthetase compare
CCNA_03680 +2.3 19.5 aminopeptidase N compare
CCNA_03959 +2.3 2.0 hypothetical protein compare
CCNA_01959 +2.3 5.8 3-dehydroquinate dehydratase compare
CCNA_03513 +2.3 9.6 cytochrome c oxidase subunit III coxC compare
CCNA_03557 +2.3 8.9 hypothetical protein compare
CCNA_02030 +2.3 4.7 hypothetical protein compare
CCNA_01763 +2.3 14.2 multifunctional aminopeptidase compare
CCNA_01065 +2.3 12.0 glycosyltransferase compare
CCNA_01593 +2.2 11.9 Xaa-pro aminopeptidase compare
CCNA_02042 +2.2 14.3 trigger factor chaperone compare
CCNA_03371 +2.2 9.8 bacterioferritin compare
CCNA_00895 +2.2 12.3 hypothetical protein compare
CCNA_01528 +2.2 12.5 flagellin fljK compare
CCNA_03215 +2.2 14.2 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_00167 +2.2 13.6 metallophosphatase family protein compare
CCNA_03281 +2.2 17.0 AsnC-family transcriptional regulator compare
CCNA_01804 +2.2 13.1 glutathione peroxidase compare
CCNA_00189 +2.2 4.4 zinc-finger domain protein compare
CCNA_00834 +2.2 9.2 flagellin FljM compare
CCNA_00946 +2.2 9.8 Basal-body rod modification protein FlgD compare
CCNA_02287 +2.2 11.5 TetR-family transcriptional regulator compare
CCNA_00441 +2.2 11.5 chemotaxis receiver domain protein cheYI compare
CCNA_02012 +2.2 12.2 metal-dependent hydrolase compare
CCNA_02367 +2.2 13.3 CelR-family transcriptional regulator compare
CCNA_00079 +2.1 8.5 MerR-family transcriptional regulator compare
CCNA_01655 +2.1 11.5 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01062 +2.1 13.4 GDP-mannose 4,6 dehydratase compare
CCNA_03515 +2.1 6.7 hypothetical protein compare
CCNA_02025 +2.1 8.5 hypothetical protein compare
CCNA_02576 +2.1 13.7 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_00951 +2.1 12.9 flagellar motor switch protein FliG compare
CCNA_02567 +2.1 13.1 sensory transduction histidine kinase pleC compare
CCNA_03722 +2.1 17.7 glutamate synthase (NADPH) large chain GltB compare
CCNA_00352 +2.1 11.0 integral membrane protein compare
CCNA_00164 +2.1 13.3 O-antigen polymerase compare
CCNA_00324 +2.1 3.4 ExbD-family protein compare
CCNA_03622 +2.1 12.0 beta-lactamase repressor compare
CCNA_03105 +2.0 9.1 DnaJ domain protein compare
CCNA_00507 +2.0 10.5 cytochrome c1 compare
CCNA_01679 +2.0 11.4 succinylglutamic semialdehyde dehydrogenase compare
CCNA_00506 +2.0 11.3 cytochrome b compare
CCNA_01678 +2.0 11.3 arginine N-succinyltransferase, beta chain compare
CCNA_02243 +2.0 12.9 D-alanyl-D-alanine serine-type carboxypeptidase compare
CCNA_02805 +2.0 8.5 hypothetical protein compare
CCNA_01011 +2.0 9.7 imidazolonepropionase compare
CCNA_00035 +2.0 10.5 tRNA pseudouridine synthase B compare
CCNA_03132 +2.0 7.3 transcriptional regulator, antitoxin protein higA compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in stress experiments

For stress Benzalkonium Chloride across organisms