Experiment set3IT046 for Sinorhizobium meliloti 1021

Compare to:

LB with Sisomicin sulfate salt 0.004 mg/ml

200 most important genes:

  gene name fitness t score description  
SMc02234 -5.2 -3.8 hypothetical protein compare
SMc02641 -5.1 -5.9 UDP-glucose 6-dehydrogenase compare
SMc02575 -5.1 -14.9 ATP-dependent protease peptidase subunit conserved
SMc00427 -4.6 -4.1 peptide chain release factor RF-3 protein compare
SMc03978 -4.4 -4.2 transketolase compare
SMc01207 -4.3 -3.7 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc02520 -4.1 -10.3 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc04085 -4.1 -7.8 hypothetical protein compare
SMc01880 -4.1 -2.8 pantoate--beta-alanine ligase compare
SMc00619 -4.0 -2.6 hypothetical protein compare
SMc00815 -4.0 -2.3 inosine 5'-monophosphate dehydrogenase compare
SMc00169 -4.0 -17.9 malic enzyme compare
SMc01881 -4.0 -3.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02576 -3.8 -1.3 acetyltransferase compare
SMc02102 -3.5 -5.3 hypothetical protein compare
SMc02246 -3.5 -0.9 hypothetical protein compare
SMc00010 -3.5 -2.5 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02147 -3.4 -9.5 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc03763 -3.4 -5.8 cytosine-specific methyltransferase compare
SMc01147 -3.3 -4.3 coproporphyrinogen III oxidase compare
SMa0789 -3.2 -4.2 GntR family transcriptional regulator compare
SMc01220 -3.2 -7.4 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00302 -3.1 -3.0 hypothetical protein compare
SMc00416 -3.1 -7.3 hypothetical protein conserved
SMc03850 -2.9 -1.4 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc01929 -2.9 -4.2 hypothetical protein compare
SMc01852 -2.9 -10.4 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc02909 -2.9 -2.4 transglycosylase transmembrane protein compare
SMc02141 -2.8 -4.6 phosphate transporter PhoU compare
SMc02114 -2.8 -4.4 hypothetical protein compare
SMc02309 -2.8 -6.1 arsenate reductase compare
SMc02640 -2.7 -5.8 UDP-glucuronic acid epimerase compare
SMc02142 -2.7 -4.8 phosphate transporter ATP-binding protein compare
SM_b20676 -2.7 -7.4 hypothetical protein compare
SMc03070 -2.6 -7.8 glucose-6-phosphate 1-dehydrogenase compare
SM_b20948 -2.6 -1.7 glucosyltransferase compare
SMc02385 -2.6 -3.4 hypothetical protein compare
SMc00067 -2.6 -8.4 outer-membranne lipoprotein compare
SMc02232 -2.6 -2.0 hypothetical protein compare
SMc01347 -2.5 -5.1 hypothetical protein compare
SMc02115 -2.5 -1.2 hypothetical protein compare
SMc02753 -2.5 -2.0 PTS system transporter subunit IIA compare
SM_b20226 -2.5 -1.6 hypothetical protein compare
SMc00656 -2.5 -1.6 hypothetical protein compare
SMc03967 -2.4 -1.4 Holliday junction resolvase compare
SMc02866 -2.3 -2.9 transcriptional regulator compare
SMc02144 -2.3 -3.8 phosphate ABC transporter permease compare
SM_b20750 -2.3 -2.2 dehydrogenase compare
SMc02140 -2.3 -2.2 phosphate regulon transcriptional regulatory protein compare
SMc00914 -2.3 -4.0 oxidoreductase compare
SMc01438 -2.2 -6.3 protease precursor signal peptide protein compare
SMc02833 -2.2 -2.5 penicillin-insensitive murein endopeptidase compare
SMc01360 -2.2 -3.8 aspartate carbamoyltransferase catalytic subunit compare
SMc00013 -2.2 -2.0 cytochrome C oxidase subunit III transmembrane protein compare
SMc00492 -2.2 -1.0 hypothetical protein compare
SMc01801 -2.2 -2.6 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc01853 -2.2 -4.4 hypothetical protein compare
SMc02145 -2.1 -1.2 signal peptide protein compare
SMc03839 -2.1 -1.8 hypothetical protein compare
SMc01206 -2.1 -1.9 queuine tRNA-ribosyltransferase compare
SMc01858 -2.1 -1.2 S-adenosyl-methyltransferase MraW compare
SMc04242 -2.0 -2.2 zinc uptake regulation protein compare
SMc01613 -2.0 -4.9 ribose-5-phosphate isomerase B compare
SMc03924 -2.0 -6.6 glycogen synthase compare
SMc02363 -2.0 -3.0 cytochrome C-type biogenesis transmembrane protein compare
SMc01857 -2.0 -3.1 cell division protein MraZ compare
SMc02478 -2.0 -11.1 hypothetical protein compare
SMc00689 -1.9 -4.8 lipoprotein compare
SMc00334 -1.9 -1.0 cytidylate kinase compare
SM_b20509 -1.9 -2.6 transcriptional regulator compare
SMc00320 -1.9 -6.9 ribosome-binding factor A compare
SMc02978 -1.9 -3.8 hypothetical protein compare
SMc01361 -1.8 -3.7 dihydroorotase compare
SMc01441 -1.8 -5.4 membrane bound protease compare
SM_b20452 -1.8 -3.6 hypothetical protein compare
SMc02227 -1.8 -4.6 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SM_b21213 -1.8 -4.1 serinethreonine protein phosphatase compare
SMc02510 -1.8 -0.9 ferric uptake regulation protein compare
SMc02786 -1.8 -5.6 translocase transmembrane protein compare
SM_b20655 -1.8 -2.5 hypothetical protein compare
SMc04330 -1.7 -2.4 trimethylamine methyltransferase compare
SMc02435 -1.7 -2.4 methyltransferase compare
SMc01472 -1.7 -0.9 50S ribosomal protein L11 methyltransferase compare
SMc01221 -1.7 -7.8 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02868 -1.7 -5.8 multidrug efflux system protein compare
SMc00963 -1.7 -3.4 hypothetical protein compare
SMc03091 -1.6 -3.8 arginase compare
SMc00053 -1.6 -0.7 monovalent cation/H+ antiporter subunit C compare
SMc00580 -1.6 -2.9 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc02505 -1.6 -1.6 hypothetical protein compare
SMc04169 -1.6 -11.8 transcriptional regulator compare
SMc00088 -1.6 -1.7 hypothetical protein compare
SMc04024 -1.6 -4.5 membrane-bound lytic murein transglycosylase compare
SMc02569 -1.6 -3.6 imidazole glycerol phosphate synthase subunit HisF compare
SM_b20876 -1.5 -2.5 hypothetical protein compare
SMc03849 -1.5 -1.3 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02867 -1.5 -3.8 multidrug-efflux system transmembrane protein compare
SMc04296 -1.5 -1.0 cell division protein FtsZ compare
SMc02143 -1.5 -2.7 phosphate ABC transporter permease compare
SMc01845 -1.5 -1.5 transglycosylase transmembrane protein compare
SMc01458 -1.5 -5.3 transporter compare
SMc00347 -1.5 -2.1 nucleoside diphosphate kinase regulator compare
SMc01885 -1.5 -4.8 aminopeptidase P protein compare
SMc01457 -1.4 -5.6 transport transmembrane protein compare
SMc02365 -1.4 -5.3 protease precursor protein compare
SMc01001 -1.4 -4.7 hypothetical protein compare
SMc04432 -1.4 -2.4 hypothetical protein compare
SMc00897 -1.4 -5.6 PMBA protein compare
SMc00355 -1.4 -3.7 hypothetical protein compare
SMc01342 -1.4 -4.1 hypothetical protein compare
SMc01939 -1.4 -1.0 urease subunit beta compare
SMc00189 -1.4 -3.5 cytochrome C1 protein compare
SMc01127 -1.4 -4.1 hypothetical protein compare
SMc03100 -1.4 -1.3 hypothetical protein compare
SMc02719 -1.4 -1.1 transposase compare
SMc02582 -1.4 -3.2 hypothetical protein compare
SMc01701 -1.4 -2.2 hypothetical protein compare
SMc01800 -1.4 -1.5 cytochrome C oxidase assembly transmembrane protein compare
SMc01461 -1.4 -3.9 DNA helicase II protein compare
SMc01183 -1.4 -1.4 LexA repressor compare
SM_b21551 -1.4 -0.9 hypothetical protein compare
SMc02373 -1.4 -1.0 hypothetical protein compare
SM_b20563 -1.4 -2.3 hypothetical protein compare
SM_b20146 -1.4 -3.6 pyridoxal phosphate biosynthetic protein compare
SMa1323 -1.4 -1.8 Transcription regulator compare
SMc01106 -1.4 -5.1 small heat shock protein compare
SMc03229 -1.4 -0.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00876 -1.4 -5.4 ATP-binding MRP protein compare
SMc00461 -1.4 -1.4 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMc02484 -1.3 -2.5 amino acid efflux transmembrane protein compare
SMc00981 -1.3 -4.6 ferredoxin protein compare
SMc02451 -1.3 -1.3 hypothetical protein compare
SMc02799 -1.3 -1.8 16S rRNA methyltransferase GidB compare
SMc01724 -1.3 -1.6 hypothetical protein compare
SMc00726 -1.3 -0.9 thiol:disulfide interchange redox-active center transmembrane protein compare
SM_b21192 -1.3 -6.3 fructose-1,6-bisphosphate aldolase compare
SMa0132 -1.3 -2.1 hypothetical protein compare
SMc01770 -1.3 -1.6 serine hydroxymethyltransferase compare
SMc02714 -1.3 -1.2 hypothetical protein compare
SMc00239 -1.3 -0.9 hypothetical protein compare
SM_b21181 -1.3 -5.8 glutaryl-CoA dehydrogenase compare
SMc02758 -1.3 -3.1 nucleotidyl transferase compare
SM_b20260 -1.3 -2.3 hypothetical protein compare
SMc02229 -1.3 -6.4 acyl-CoA dehydrogenase compare
SMc02407 -1.3 -5.0 hypothetical protein compare
SMc00760 -1.2 -3.0 recombinase A compare
SMc00735 -1.2 -5.8 glutamyl-Q tRNA(Asp) synthetase compare
SM_b20323 -1.2 -1.1 transcriptional regulator compare
SM_b20647 -1.2 -3.1 hypothetical protein compare
SMc02813 -1.2 -5.0 aminoglycoside N3-acetyltransferase compare
SMc01258 -1.2 -3.6 hypothetical protein compare
SMc01568 -1.2 -1.3 hypothetical protein compare
SMa0833 -1.2 -1.1 hypothetical protein compare
SMc02713 -1.2 -1.2 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc00151 -1.2 -4.6 phosphoglycolate phosphatase compare
SMc02853 -1.2 -3.9 hypothetical protein compare
SMc01280 -1.2 -1.4 protease compare
SMc00987 -1.2 -2.2 hypothetical protein compare
SMc02707 -1.2 -1.6 hypothetical protein compare
SMc00982 -1.2 -3.6 dioxygenase compare
SMc00406 -1.1 -6.2 4Fe-4S ferredoxin conserved
SMc00511 -1.1 -2.5 D-ribulose-5-phosphate 3-epimerase compare
SMc03800 -1.1 -2.9 hypothetical protein compare
SMc00828 -1.1 -3.4 hypothetical protein compare
SMc01440 -1.1 -2.3 hydrolase serine protease transmembrane protein compare
SMa0887 -1.1 -1.7 hypothetical protein compare
SMc02071 -1.1 -2.0 hydrolase glycosidase compare
SMc02434 -1.1 -2.2 hypothetical protein compare
SMc00566 -1.1 -2.0 hypothetical protein compare
SMc02306 -1.1 -1.0 hypothetical protein compare
SMc02266 -1.1 -1.2 hypothetical protein compare
SM_b21429 -1.1 -4.5 iron ABC transporter ATP-binding protein compare
SMc03996 -1.1 -2.8 thiamine-phosphate pyrophosphorylase compare
SMc02844 -1.1 -1.0 transcriptional regulator compare
SMc00762 -1.1 -5.3 glutamine synthetase compare
SM_b21687 -1.1 -1.0 hypothetical protein compare
SMa0575 -1.1 -1.8 hypothetical protein compare
SM_b20383 -1.1 -3.3 ABC transporter substrate-binding protein compare
SMc00725 -1.1 -2.7 argininosuccinate lyase compare
SMc05011 -1.1 -1.3 bacteriophage DNA-binding transcription regulator compare
SMa0144 -1.1 -0.7 hypothetical protein compare
SMc02695 -1.0 -4.3 GTP-dependent nucleic acid-binding protein EngD compare
SMa0872 -1.0 -2.0 hypothetical protein compare
SMc02856 -1.0 -5.0 penicillin-binding protein compare
SMc00928 -1.0 -1.0 signal peptide protein compare
SMc02260 -1.0 -1.7 ABC transporter ATP-binding protein compare
SM_b21126 -1.0 -3.4 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) compare
SMc03993 -1.0 -3.2 hypothetical protein compare
SM_b20293 -1.0 -0.7 hypothetical protein compare
SM_b20773 -1.0 -2.8 GntR family transcriptional regulator compare
SMc00691 -1.0 -2.1 site-specific tyrosine recombinase XerD compare
SM_b21669 -1.0 -1.4 hypothetical protein compare
SMc01877 -1.0 -4.2 DNA repair protein compare
SMc00960 -1.0 -4.8 hypothetical protein compare
SMc04351 -1.0 -5.4 transmembrane ATP-binding ABC transporter protein compare
SMc02886 -1.0 -1.3 signal peptide protein compare
SM_b20194 -1.0 -3.1 hypothetical protein compare
SMc00166 -1.0 -0.8 oxidoreductase NAD protein compare
SMc00070 -1.0 -2.3 signal peptide protein compare
SMc04462 -1.0 -2.4 glycerate dehydrogenase compare


Specific Phenotypes

For 11 genes in this experiment

For stress Sisomicin sulfate salt in Sinorhizobium meliloti 1021

For stress Sisomicin sulfate salt across organisms