Experiment set3IT045 for Methanococcus maripaludis JJ

Compare to:

formate McAA thiamine dropout

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.9 11.4 hypothetical protein compare
MMJJ_RS08830 +1.3 4.4 hypothetical protein compare
MMJJ_RS03725 +1.3 4.3 sulfurtransferase TusA family protein compare
MMJJ_RS04005 +1.1 8.6 acetate--CoA ligase family protein compare
MMJJ_RS06675 +0.8 6.0 TIGR01212 family radical SAM protein compare
MMJJ_RS05685 +0.8 5.0 class III signal peptide-containing protein compare
MMJJ_RS08130 +0.8 0.7 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS06540 +0.8 2.0 DUF2120 domain-containing protein compare
MMJJ_RS06505 +0.8 2.6 prephenate dehydratase compare
MMJJ_RS07240 +0.7 5.8 MBL fold metallo-hydrolase compare
MMJJ_RS06680 +0.7 3.2 DUF366 family protein compare
MMJJ_RS01855 +0.6 4.4 MBL fold metallo-hydrolase compare
MMJJ_RS07185 +0.6 1.8 DUF371 domain-containing protein compare
MMJJ_RS06500 +0.6 3.9 class I SAM-dependent methyltransferase compare
MMJJ_RS07260 +0.6 3.7 PspC domain-containing protein compare
MMJJ_RS07220 +0.6 4.2 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS07005 +0.6 2.4 transcription factor S compare
MMJJ_RS07750 +0.6 1.8 class III signal peptide-containing protein compare
MMJJ_RS08410 +0.5 1.2 CBS domain-containing protein compare
MMJJ_RS04955 +0.5 2.9 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS07010 +0.5 2.4 preprotein translocase subunit Sec61beta compare
MMJJ_RS07280 +0.5 3.1 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS07450 +0.5 3.2 hypothetical protein compare
MMJJ_RS03375 +0.5 2.9 hypothetical protein compare
MMJJ_RS06190 +0.5 3.7 7-cyano-7-deazaguanine synthase compare
MMJJ_RS06210 +0.5 2.3 hypothetical protein compare
MMJJ_RS07025 +0.5 2.3 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS04375 +0.5 1.9 hypothetical protein compare
MMJJ_RS09120 +0.5 0.7 aspartate kinase compare
MMJJ_RS06460 +0.5 2.7 cytochrome c compare
MMJJ_RS06440 +0.5 3.4 DUF4870 domain-containing protein compare
MMJJ_RS06515 +0.5 3.4 ribonuclease III compare
MMJJ_RS07680 +0.5 3.2 glucose-6-phosphate isomerase compare
MMJJ_RS06385 +0.5 2.6 hypothetical protein compare
MMJJ_RS06950 +0.5 3.8 4-demethylwyosine synthase TYW1 compare
MMJJ_RS07225 +0.5 3.6 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS06090 +0.5 2.7 hypothetical protein compare
MMJJ_RS07985 +0.5 2.7 hypothetical protein compare
MMJJ_RS07890 +0.5 3.0 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS09360 +0.5 3.0 hypothetical protein compare
MMJJ_RS06280 +0.5 3.2 hypothetical protein compare
MMJJ_RS07495 +0.5 2.7 4Fe-4S binding protein compare
MMJJ_RS06535 +0.5 3.5 UPF0104 family protein compare
MMJJ_RS07235 +0.5 3.5 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS06745 +0.5 2.0 energy-coupling factor ABC transporter permease compare
MMJJ_RS06735 +0.5 3.0 cobalt ECF transporter T component CbiQ compare
MMJJ_RS06800 +0.5 2.2 prefoldin subunit alpha compare
MMJJ_RS09365 +0.4 1.5 hypothetical protein compare
MMJJ_RS03835 +0.4 1.5 DUF504 domain-containing protein compare
MMJJ_RS07205 +0.4 1.9 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS05975 +0.4 2.6 sulfurtransferase TusA family protein compare
MMJJ_RS07795 +0.4 2.2 cupin domain-containing protein compare
MMJJ_RS01745 +0.4 2.3 metal-dependent transcriptional regulator compare
MMJJ_RS06520 +0.4 2.8 TldD/PmbA family protein compare
MMJJ_RS09065 +0.4 2.2 hypothetical protein compare
MMJJ_RS04105 +0.4 3.2 prepilin peptidase compare
MMJJ_RS06770 +0.4 3.2 hypothetical protein compare
MMJJ_RS07480 +0.4 3.0 FAD-dependent oxidoreductase compare
MMJJ_RS06085 +0.4 1.5 proteasome assembly chaperone family protein compare
MMJJ_RS01825 +0.4 2.1 DNA repair and recombination protein RadB compare
MMJJ_RS06665 +0.4 1.3 DUF3236 domain-containing protein compare
MMJJ_RS06810 +0.4 3.0 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06790 +0.4 3.0 nucleotidyltransferase family protein compare
MMJJ_RS07765 +0.4 1.5 DMT family protein compare
MMJJ_RS06470 +0.4 2.8 tripartite tricarboxylate transporter permease compare
MMJJ_RS06205 +0.4 2.4 EamA family transporter compare
MMJJ_RS07920 +0.4 2.5 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS06685 +0.4 3.1 S-layer protein compare
MMJJ_RS00890 +0.4 2.3 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS07800 +0.4 2.8 AMP-binding protein compare
MMJJ_RS08225 +0.4 1.2 peptidylprolyl isomerase compare
MMJJ_RS07270 +0.4 2.3 ribonuclease HII compare
MMJJ_RS04850 +0.4 1.7 energy-coupling factor transporter transmembrane protein EcfT compare
MMJJ_RS04215 +0.4 2.7 DMT family transporter compare
MMJJ_RS05510 +0.4 2.2 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS04545 +0.4 1.2 PadR family transcriptional regulator compare
MMJJ_RS07230 +0.4 1.9 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS08515 +0.4 1.3 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS05040 +0.3 2.3 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS04135 +0.3 1.3 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS09230 +0.3 1.1 hypothetical protein compare
MMJJ_RS05530 +0.3 0.7 roadblock/LC7 domain-containing protein compare
MMJJ_RS05980 +0.3 2.1 DUF5400 domain-containing protein compare
MMJJ_RS07215 +0.3 2.6 TIGR00341 family protein compare
MMJJ_RS08375 +0.3 2.2 ferritin compare
MMJJ_RS00150 +0.3 1.6 DUF2180 family protein compare
MMJJ_RS08285 +0.3 2.1 class I SAM-dependent methyltransferase compare
MMJJ_RS06120 +0.3 2.2 DUF4013 domain-containing protein compare
MMJJ_RS08100 +0.3 1.7 hypothetical protein compare
MMJJ_RS06075 +0.3 2.0 DNA-binding protein Alba compare
MMJJ_RS06640 +0.3 1.9 YfcE family phosphodiesterase compare
MMJJ_RS07445 +0.3 2.0 RlmF-related methyltransferase compare
MMJJ_RS04635 +0.3 1.6 DUF367 family protein compare
MMJJ_RS05200 +0.3 2.3 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS06275 +0.3 1.1 hypothetical protein compare
MMJJ_RS07210 +0.3 2.2 AmmeMemoRadiSam system protein B compare
MMJJ_RS03575 +0.3 1.3 NUDIX hydrolase compare
MMJJ_RS06285 +0.3 1.7 YchF/TatD family DNA exonuclease compare
MMJJ_RS05580 +0.3 1.6 methanogenesis marker 9 domain-containing protein compare
MMJJ_RS06455 +0.3 2.1 YeeE/YedE family protein compare
MMJJ_RS02115 +0.3 2.1 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS00305 +0.3 2.0 chemotaxis protein CheC compare
MMJJ_RS09015 +0.3 1.7 SPFH domain-containing protein compare
MMJJ_RS01530 +0.3 0.7 YwbE family protein compare
MMJJ_RS00320 +0.3 1.5 chemotaxis protein CheD compare
MMJJ_RS07385 +0.3 1.9 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS06585 +0.3 1.6 alanine racemase compare
MMJJ_RS00155 +0.3 2.1 DUF2193 domain-containing protein compare
MMJJ_RS00145 +0.3 2.0 aquaporin family protein compare
MMJJ_RS08160 +0.3 1.2 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMJJ_RS06430 +0.3 1.5 haloacid dehalogenase compare
MMJJ_RS02270 +0.3 1.0 HEPN domain-containing protein compare
MMJJ_RS08935 +0.3 0.4 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS07500 +0.3 2.2 hypothetical protein compare
MMJJ_RS03515 +0.3 1.5 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS04345 +0.3 1.0 DUF2080 family transposase-associated protein compare
MMJJ_RS01270 +0.3 1.6 4Fe-4S binding protein compare
MMJJ_RS08520 +0.3 0.6 peptidylprolyl isomerase compare
MMJJ_RS06960 +0.3 2.2 CAP domain-containing protein compare
MMJJ_RS01100 +0.3 0.6 helix-turn-helix domain-containing protein compare
MMJJ_RS08370 +0.3 1.1 hypothetical protein compare
MMJJ_RS06740 +0.3 1.2 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS08305 +0.3 1.1 peroxiredoxin compare
MMJJ_RS06445 +0.3 2.2 hypothetical protein compare
MMJJ_RS07860 +0.3 1.3 hypothetical protein compare
MMJJ_RS06235 +0.3 1.9 IGHMBP2 family helicase compare
MMJJ_RS03730 +0.3 1.4 SWIM zinc finger family protein compare
MMJJ_RS02180 +0.3 1.2 DHH family phosphoesterase compare
MMJJ_RS02230 +0.3 2.0 hypothetical protein compare
MMJJ_RS06100 +0.3 1.4 rubrerythrin compare
MMJJ_RS04390 +0.3 1.8 rhomboid family intramembrane serine protease compare
MMJJ_RS08685 +0.3 1.7 phosphate ABC transporter permease subunit PstC compare
MMJJ_RS08485 +0.3 1.0 Lrp/AsnC family transcriptional regulator compare
MMJJ_RS08580 +0.2 1.3 YkgJ family cysteine cluster protein compare
MMJJ_RS05390 +0.2 1.6 tRNA pseudouridine(13) synthase TruD compare
MMJJ_RS03595 +0.2 0.9 hypothetical protein compare
MMJJ_RS05700 +0.2 1.6 metallophosphoesterase compare
MMJJ_RS04410 +0.2 1.0 hypothetical protein compare
MMJJ_RS05505 +0.2 2.3 hypothetical protein compare
MMJJ_RS06765 +0.2 1.9 hypothetical protein compare
MMJJ_RS00630 +0.2 1.3 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMJJ_RS08930 +0.2 1.5 5'/3'-nucleotidase SurE compare
MMJJ_RS03450 +0.2 1.1 hypothetical protein compare
MMJJ_RS01970 +0.2 1.0 hypothetical protein compare
MMJJ_RS08350 +0.2 2.0 heavy metal translocating P-type ATPase compare
MMJJ_RS02895 +0.2 1.5 ATP-binding protein compare
MMJJ_RS08310 +0.2 1.2 ZIP family metal transporter compare
MMJJ_RS03290 +0.2 1.8 amidohydrolase compare
MMJJ_RS07255 +0.2 1.9 hypothetical protein compare
MMJJ_RS06135 +0.2 1.6 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS04240 +0.2 1.8 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS02160 +0.2 1.5 amino acid ABC transporter permease compare
MMJJ_RS01300 +0.2 1.4 MarR family transcriptional regulator compare
MMJJ_RS04815 +0.2 0.9 TIM barrel protein compare
MMJJ_RS09020 +0.2 1.0 hypothetical protein compare
MMJJ_RS01035 +0.2 1.0 hypothetical protein compare
MMJJ_RS06710 +0.2 1.6 TldD/PmbA family protein compare
MMJJ_RS02330 +0.2 1.8 ABC transporter ATP-binding protein compare
MMJJ_RS07815 +0.2 1.5 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS01785 +0.2 0.3 50S ribosomal protein L14e compare
MMJJ_RS05585 +0.2 1.4 hypothetical protein compare
MMJJ_RS06495 +0.2 0.6 hypothetical protein compare
MMJJ_RS01395 +0.2 0.8 DUF1894 domain-containing protein compare
MMJJ_RS04500 +0.2 1.2 hypothetical protein compare
MMJJ_RS03040 +0.2 1.2 lactate utilization protein compare
MMJJ_RS06290 +0.2 1.3 DUF749 domain-containing protein compare
MMJJ_RS07835 +0.2 1.2 UPF0489 family protein compare
MMJJ_RS07365 +0.2 1.4 CatB-related O-acetyltransferase compare
MMJJ_RS07760 +0.2 1.1 GNAT family N-acetyltransferase compare
MMJJ_RS06590 +0.2 1.5 sodium:alanine symporter family protein compare
MMJJ_RS03905 +0.2 1.2 ATP-binding cassette domain-containing protein compare
MMJJ_RS04195 +0.2 1.0 XTP/dITP diphosphatase compare
MMJJ_RS03025 +0.2 1.6 Ig-like domain-containing protein compare
MMJJ_RS09005 +0.2 1.6 N-6 DNA methylase compare
MMJJ_RS03395 +0.2 0.5 hypothetical protein compare
MMJJ_RS05355 +0.2 1.3 DUF2121 domain-containing protein compare
MMJJ_RS05750 +0.2 1.4 flagellar accessory protein FlaH compare
MMJJ_RS07595 +0.2 0.9 hypothetical protein compare
MMJJ_RS03380 +0.2 0.9 hypothetical protein compare
MMJJ_RS08275 +0.2 1.7 iron ABC transporter substrate-binding protein compare
MMJJ_RS05500 +0.2 1.6 hypothetical protein compare
MMJJ_RS00740 +0.2 0.9 hypothetical protein compare
MMJJ_RS08670 +0.2 1.3 phosphate signaling complex protein PhoU compare
MMJJ_RS07820 +0.2 1.3 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS00395 +0.2 1.2 DUF473 domain-containing protein compare
MMJJ_RS08255 +0.2 1.2 GNAT family N-acetyltransferase compare
MMJJ_RS07175 +0.2 1.4 DEAD/DEAH box helicase compare
MMJJ_RS07745 +0.2 1.3 DUF5814 domain-containing protein compare
MMJJ_RS04950 +0.2 1.4 TIGR00375 family protein compare
MMJJ_RS06450 +0.2 1.2 DUF3343 domain-containing protein compare
MMJJ_RS04070 +0.2 1.5 DUF2341 domain-containing protein compare
MMJJ_RS05925 +0.2 1.2 DUF2099 family protein compare
MMJJ_RS02335 +0.2 1.4 ABC transporter substrate-binding protein compare
MMJJ_RS07935 +0.2 0.2 protein fwdD compare
MMJJ_RS08395 +0.2 1.3 CoB--CoM heterodisulfide reductase subunit B compare
MMJJ_RS06055 +0.2 1.1 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS02340 +0.2 0.8 SAM-dependent methyltransferase compare
MMJJ_RS02295 +0.2 1.4 hypothetical protein compare
MMJJ_RS05895 +0.2 1.4 ABC transporter permease compare
MMJJ_RS04430 +0.2 1.2 purine NTPase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments