Experiment set3IT045 for Dyella japonica UNC79MFTsu3.2
LB with Paraquat dichloride 0.1 mg/ml
Group: stressMedia: LB + Paraquat dichloride (0.1 mg/ml)
Culturing: Dyella79_ML3, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
Growth: about 5.0 generations
By: Adam on 17-May-17
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 1770 C2
Specific Phenotypes
For 2 genes in this experiment
For stress Paraquat dichloride in Dyella japonica UNC79MFTsu3.2
For stress Paraquat dichloride across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Biogenesis of cytochrome c oxidases | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| NADPH to cytochrome c oxidase via plastocyanin (thylakoid membrane) | 4 | 1 | 1 |
| photosynthesis light reactions | 4 | 1 | 1 |
| superpathway of photosynthetic hydrogen production | 6 | 3 | 1 |
| oxygenic photosynthesis | 17 | 10 | 1 |
| ethene biosynthesis V (engineered) | 25 | 17 | 1 |
| photosynthetic 3-hydroxybutanoate biosynthesis (engineered) | 26 | 17 | 1 |
| 1-butanol autotrophic biosynthesis (engineered) | 27 | 18 | 1 |