Experiment set3IT042 for Methanococcus maripaludis JJ

Compare to:

formate McAA pyroxidine HCl dropout

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.6 9.5 hypothetical protein compare
MMJJ_RS04005 +0.9 7.3 acetate--CoA ligase family protein compare
MMJJ_RS08130 +0.8 0.9 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS03725 +0.7 3.4 sulfurtransferase TusA family protein compare
MMJJ_RS08830 +0.7 2.8 hypothetical protein compare
MMJJ_RS09120 +0.6 1.3 aspartate kinase compare
MMJJ_RS07230 +0.6 4.3 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS07015 +0.6 1.0 PFL family protein compare
MMJJ_RS06675 +0.6 5.0 TIGR01212 family radical SAM protein compare
MMJJ_RS07920 +0.6 3.8 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS07235 +0.6 4.8 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS06210 +0.6 3.6 hypothetical protein compare
MMJJ_RS07935 +0.6 0.6 protein fwdD compare
MMJJ_RS04955 +0.5 3.8 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS07220 +0.5 4.3 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS09405 +0.5 1.7 hypothetical protein compare
MMJJ_RS05685 +0.5 3.1 class III signal peptide-containing protein compare
MMJJ_RS06190 +0.5 3.6 7-cyano-7-deazaguanine synthase compare
MMJJ_RS06090 +0.5 3.4 hypothetical protein compare
MMJJ_RS06950 +0.5 3.2 4-demethylwyosine synthase TYW1 compare
MMJJ_RS06275 +0.5 2.3 hypothetical protein compare
MMJJ_RS06460 +0.5 2.9 cytochrome c compare
MMJJ_RS06680 +0.4 2.4 DUF366 family protein compare
MMJJ_RS08410 +0.4 0.8 CBS domain-containing protein compare
MMJJ_RS04545 +0.4 1.1 PadR family transcriptional regulator compare
MMJJ_RS06505 +0.4 1.6 prephenate dehydratase compare
MMJJ_RS08935 +0.4 0.7 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS04850 +0.4 2.6 energy-coupling factor transporter transmembrane protein EcfT compare
MMJJ_RS06500 +0.4 2.5 class I SAM-dependent methyltransferase compare
MMJJ_RS06430 +0.4 2.4 haloacid dehalogenase compare
MMJJ_RS07025 +0.4 2.5 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS01855 +0.4 3.0 MBL fold metallo-hydrolase compare
MMJJ_RS04105 +0.4 3.3 prepilin peptidase compare
MMJJ_RS07240 +0.4 3.5 MBL fold metallo-hydrolase compare
MMJJ_RS03605 +0.4 1.9 TIGR00297 family protein compare
MMJJ_RS00500 +0.4 1.6 GNAT family N-acetyltransferase compare
MMJJ_RS05040 +0.4 2.7 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS07260 +0.4 2.5 PspC domain-containing protein compare
MMJJ_RS07765 +0.4 1.3 DMT family protein compare
MMJJ_RS06280 +0.4 3.0 hypothetical protein compare
MMJJ_RS07225 +0.4 2.9 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS06440 +0.4 2.5 DUF4870 domain-containing protein compare
MMJJ_RS03375 +0.4 2.4 hypothetical protein compare
MMJJ_RS05580 +0.4 2.6 methanogenesis marker 9 domain-containing protein compare
MMJJ_RS09050 +0.4 1.9 hypothetical protein compare
MMJJ_RS08100 +0.4 2.1 hypothetical protein compare
MMJJ_RS00115 +0.4 1.6 hypothetical protein compare
MMJJ_RS02665 +0.4 1.5 methyl-accepting chemotaxis protein compare
MMJJ_RS08525 +0.4 2.3 peptidylprolyl isomerase compare
MMJJ_RS03775 +0.3 1.7 50S ribosomal protein L15e compare
MMJJ_RS05695 +0.3 1.3 class III signal peptide-containing protein compare
MMJJ_RS06205 +0.3 2.6 EamA family transporter compare
MMJJ_RS05510 +0.3 2.6 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS09295 +0.3 0.4 hypothetical protein compare
MMJJ_RS01825 +0.3 2.0 DNA repair and recombination protein RadB compare
MMJJ_RS05525 +0.3 2.0 GTP-binding protein compare
MMJJ_RS07680 +0.3 2.2 glucose-6-phosphate isomerase compare
MMJJ_RS04365 +0.3 1.9 helix-turn-helix transcriptional regulator compare
MMJJ_RS07210 +0.3 2.4 AmmeMemoRadiSam system protein B compare
MMJJ_RS06580 +0.3 2.6 alanine dehydrogenase compare
MMJJ_RS06120 +0.3 2.5 DUF4013 domain-containing protein compare
MMJJ_RS06810 +0.3 2.5 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06735 +0.3 2.1 cobalt ECF transporter T component CbiQ compare
MMJJ_RS06770 +0.3 2.6 hypothetical protein compare
MMJJ_RS07740 +0.3 2.3 DUF2334 domain-containing protein compare
MMJJ_RS06960 +0.3 2.8 CAP domain-containing protein compare
MMJJ_RS06685 +0.3 2.7 S-layer protein compare
MMJJ_RS07480 +0.3 2.5 FAD-dependent oxidoreductase compare
MMJJ_RS00405 +0.3 2.0 flavodoxin family protein compare
MMJJ_RS06535 +0.3 2.5 UPF0104 family protein compare
MMJJ_RS08305 +0.3 1.4 peroxiredoxin compare
MMJJ_RS05350 +0.3 1.5 DUF192 domain-containing protein compare
MMJJ_RS03595 +0.3 1.8 hypothetical protein compare
MMJJ_RS07200 +0.3 2.4 MFS transporter compare
MMJJ_RS01590 +0.3 0.8 adenine phosphoribosyltransferase compare
MMJJ_RS01010 +0.3 2.8 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS06085 +0.3 1.7 proteasome assembly chaperone family protein compare
MMJJ_RS07985 +0.3 1.4 hypothetical protein compare
MMJJ_RS05530 +0.3 1.3 roadblock/LC7 domain-containing protein compare
MMJJ_RS07795 +0.3 1.8 cupin domain-containing protein compare
MMJJ_RS09365 +0.3 0.6 hypothetical protein compare
MMJJ_RS03575 +0.3 1.6 NUDIX hydrolase compare
MMJJ_RS03835 +0.3 1.1 DUF504 domain-containing protein compare
MMJJ_RS07835 +0.3 2.1 UPF0489 family protein compare
MMJJ_RS03515 +0.3 1.7 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS02285 +0.3 1.0 class III signal peptide-containing protein compare
MMJJ_RS07815 +0.3 1.9 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS09325 +0.3 1.4 hypothetical protein compare
MMJJ_RS06235 +0.3 2.2 IGHMBP2 family helicase compare
MMJJ_RS06710 +0.3 2.1 TldD/PmbA family protein compare
MMJJ_RS06640 +0.3 1.8 YfcE family phosphodiesterase compare
MMJJ_RS07760 +0.3 1.4 GNAT family N-acetyltransferase compare
MMJJ_RS02240 +0.3 1.0 CGGC domain-containing protein compare
MMJJ_RS03245 +0.3 0.2 UMP kinase compare
MMJJ_RS06080 +0.3 1.8 serine/threonine protein kinase compare
MMJJ_RS04135 +0.2 1.2 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS06745 +0.2 1.5 energy-coupling factor ABC transporter permease compare
MMJJ_RS02355 +0.2 1.7 DUF2798 domain-containing protein compare
MMJJ_RS04625 +0.2 1.9 SLC13 family permease compare
MMJJ_RS06495 +0.2 0.5 hypothetical protein compare
MMJJ_RS00150 +0.2 1.3 DUF2180 family protein compare
MMJJ_RS07445 +0.2 1.9 RlmF-related methyltransferase compare
MMJJ_RS06790 +0.2 2.0 nucleotidyltransferase family protein compare
MMJJ_RS09360 +0.2 1.8 hypothetical protein compare
MMJJ_RS04290 +0.2 1.3 hypothetical protein compare
MMJJ_RS04235 +0.2 1.5 molybdate ABC transporter permease subunit compare
MMJJ_RS04215 +0.2 1.9 DMT family transporter compare
MMJJ_RS09390 +0.2 0.7 hypothetical protein compare
MMJJ_RS07800 +0.2 1.8 AMP-binding protein compare
MMJJ_RS00155 +0.2 1.9 DUF2193 domain-containing protein compare
MMJJ_RS06515 +0.2 1.7 ribonuclease III compare
MMJJ_RS01395 +0.2 1.3 DUF1894 domain-containing protein compare
MMJJ_RS08485 +0.2 1.1 Lrp/AsnC family transcriptional regulator compare
MMJJ_RS07855 +0.2 1.7 YkgJ family cysteine cluster protein compare
MMJJ_RS06445 +0.2 2.0 hypothetical protein compare
MMJJ_RS00145 +0.2 1.8 aquaporin family protein compare
MMJJ_RS06800 +0.2 1.3 prefoldin subunit alpha compare
MMJJ_RS06385 +0.2 1.0 hypothetical protein compare
MMJJ_RS01140 +0.2 1.0 helix-turn-helix domain-containing protein compare
MMJJ_RS03350 +0.2 0.6 hypothetical protein compare
MMJJ_RS07005 +0.2 1.1 transcription factor S compare
MMJJ_RS00400 +0.2 1.0 tautomerase family protein compare
MMJJ_RS05500 +0.2 2.0 hypothetical protein compare
MMJJ_RS07205 +0.2 1.1 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS00630 +0.2 1.5 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMJJ_RS04300 +0.2 1.4 hypothetical protein compare
MMJJ_RS05200 +0.2 1.7 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS07810 +0.2 1.5 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS06765 +0.2 1.8 hypothetical protein compare
MMJJ_RS08810 +0.2 0.3 DUF4040 domain-containing protein compare
MMJJ_RS04375 +0.2 0.9 hypothetical protein compare
MMJJ_RS05690 +0.2 1.9 hypothetical protein compare
MMJJ_RS07365 +0.2 1.6 CatB-related O-acetyltransferase compare
MMJJ_RS07830 +0.2 1.4 DUF1786 domain-containing protein compare
MMJJ_RS01670 +0.2 1.0 hypothetical protein compare
MMJJ_RS05975 +0.2 1.2 sulfurtransferase TusA family protein compare
MMJJ_RS01955 +0.2 1.7 hypothetical protein compare
MMJJ_RS04500 +0.2 1.5 hypothetical protein compare
MMJJ_RS05705 +0.2 1.6 hypothetical protein compare
MMJJ_RS07915 +0.2 1.0 CBS domain-containing protein compare
MMJJ_RS04560 +0.2 1.4 ABC transporter permease compare
MMJJ_RS08285 +0.2 1.6 class I SAM-dependent methyltransferase compare
MMJJ_RS05340 +0.2 1.6 AAA family ATPase compare
MMJJ_RS06590 +0.2 1.6 sodium:alanine symporter family protein compare
MMJJ_RS01835 +0.2 1.6 tRNA pseudouridine(13) synthase TruD compare
MMJJ_RS01790 +0.2 1.4 pyridoxamine 5'-phosphate oxidase family protein compare
MMJJ_RS02115 +0.2 1.4 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS05585 +0.2 1.5 hypothetical protein compare
MMJJ_RS08350 +0.2 1.7 heavy metal translocating P-type ATPase compare
MMJJ_RS08225 +0.2 0.8 peptidylprolyl isomerase compare
MMJJ_RS09065 +0.2 1.2 hypothetical protein compare
MMJJ_RS05700 +0.2 1.3 metallophosphoesterase compare
MMJJ_RS04345 +0.2 0.8 DUF2080 family transposase-associated protein compare
MMJJ_RS08420 +0.2 1.6 uroporphyrinogen decarboxylase family protein compare
MMJJ_RS09005 +0.2 1.7 N-6 DNA methylase compare
MMJJ_RS05400 +0.2 0.9 CoA-binding protein compare
MMJJ_RS06105 +0.2 1.3 DUF99 family protein compare
MMJJ_RS05355 +0.2 1.4 DUF2121 domain-containing protein compare
MMJJ_RS02335 +0.2 1.6 ABC transporter substrate-binding protein compare
MMJJ_RS06555 +0.2 1.4 ATP-binding cassette domain-containing protein compare
MMJJ_RS03825 +0.2 1.3 DUF1624 domain-containing protein compare
MMJJ_RS05960 +0.2 1.3 DUF169 domain-containing protein compare
MMJJ_RS06470 +0.2 1.4 tripartite tricarboxylate transporter permease compare
MMJJ_RS03070 +0.2 0.6 MetS family NSS transporter small subunit compare
MMJJ_RS00780 +0.2 1.4 M48 family metallopeptidase compare
MMJJ_RS01920 +0.2 1.5 phosphoglycerate mutase compare
MMJJ_RS07820 +0.2 1.3 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS06550 +0.2 1.4 ABC transporter permease compare
MMJJ_RS03940 +0.2 1.1 DMT family transporter compare
MMJJ_RS03040 +0.2 1.3 lactate utilization protein compare
MMJJ_RS02160 +0.2 1.2 amino acid ABC transporter permease compare
MMJJ_RS08745 +0.2 1.3 glycosyltransferase family 9 protein compare
MMJJ_RS03735 +0.2 1.3 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS08370 +0.2 0.7 hypothetical protein compare
MMJJ_RS05505 +0.2 1.6 hypothetical protein compare
MMJJ_RS05115 +0.2 0.7 P-II family nitrogen regulator compare
MMJJ_RS02165 +0.2 1.1 ABC transporter substrate-binding protein compare
MMJJ_RS07175 +0.2 1.3 DEAD/DEAH box helicase compare
MMJJ_RS07695 +0.2 1.4 glycoside hydrolase family 15 protein compare
MMJJ_RS05390 +0.2 1.3 tRNA pseudouridine(13) synthase TruD compare
MMJJ_RS04950 +0.2 1.3 TIGR00375 family protein compare
MMJJ_RS01065 +0.2 1.2 DUF1700 domain-containing protein compare
MMJJ_RS02270 +0.2 0.8 HEPN domain-containing protein compare
MMJJ_RS03905 +0.2 0.8 ATP-binding cassette domain-containing protein compare
MMJJ_RS05990 +0.2 1.0 phosphatase PAP2 family protein compare
MMJJ_RS02295 +0.2 1.3 hypothetical protein compare
MMJJ_RS05520 +0.2 1.2 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMJJ_RS05090 +0.2 0.9 MGMT family protein compare
MMJJ_RS05105 +0.2 1.0 P-II family nitrogen regulator compare
MMJJ_RS08045 +0.1 1.2 transporter substrate-binding domain-containing protein compare
MMJJ_RS01100 +0.1 0.3 helix-turn-helix domain-containing protein compare
MMJJ_RS06740 +0.1 0.8 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS00745 +0.1 0.5 hypothetical protein compare
MMJJ_RS03395 +0.1 0.4 hypothetical protein compare
MMJJ_RS04175 +0.1 0.9 hypothetical protein compare
MMJJ_RS06585 +0.1 1.0 alanine racemase compare
MMJJ_RS07610 +0.1 0.9 DUF2119 domain-containing protein compare
MMJJ_RS08565 +0.1 1.2 ATP-binding protein compare
MMJJ_RS09205 +0.1 0.6 hypothetical protein compare
MMJJ_RS03045 +0.1 1.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments