Experiment set3IT040 for Sinorhizobium meliloti 1021

Compare to:

LB with Thallium(I) acetate 0.001 mg/ml

200 most important genes:

  gene name fitness t score description  
SMc02232 -6.3 -3.5 hypothetical protein compare
SMc00876 -5.7 -5.5 ATP-binding MRP protein compare
SMc00963 -4.4 -4.1 hypothetical protein compare
SMc02144 -4.4 -7.6 phosphate ABC transporter permease compare
SMc01881 -4.3 -3.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02510 -4.3 -1.1 ferric uptake regulation protein compare
SMc01119 -4.3 -2.1 hypothetical protein compare
SMc02909 -4.2 -2.8 transglycosylase transmembrane protein compare
SMc02147 -4.2 -9.3 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc00619 -4.1 -2.7 hypothetical protein compare
SMa0753 -4.1 -1.0 hypothetical protein compare
SMc02435 -4.1 -3.3 methyltransferase compare
SMc02833 -4.1 -2.8 penicillin-insensitive murein endopeptidase compare
SMc00914 -3.9 -6.0 oxidoreductase compare
SMc03967 -3.7 -1.6 Holliday junction resolvase compare
SMc02140 -3.4 -2.0 phosphate regulon transcriptional regulatory protein compare
SMc03978 -3.4 -5.5 transketolase compare
SMc03763 -3.3 -4.6 cytosine-specific methyltransferase compare
SMc01183 -3.3 -2.0 LexA repressor compare
SMc02145 -3.1 -1.1 signal peptide protein compare
SM_b20955 -3.1 -4.2 endo-beta-1,3-1,4-glycanase compare
SMc01880 -3.1 -3.7 pantoate--beta-alanine ligase compare
SMc02115 -3.1 -1.3 hypothetical protein compare
SMc00815 -3.0 -1.8 inosine 5'-monophosphate dehydrogenase compare
SMc02142 -3.0 -6.3 phosphate transporter ATP-binding protein compare
SMc02505 -2.9 -2.0 hypothetical protein compare
SMc02234 -2.8 -3.1 hypothetical protein compare
SMc01361 -2.8 -5.1 dihydroorotase compare
SMc00053 -2.7 -0.9 monovalent cation/H+ antiporter subunit C compare
SM_b20948 -2.7 -1.6 glucosyltransferase compare
SMc02683 -2.6 -2.7 hypothetical protein compare
SMc02114 -2.6 -5.2 hypothetical protein compare
SMc00295 -2.6 -1.0 hypothetical protein compare
SMc01579 -2.5 -1.4 hypothetical protein compare
SMc04296 -2.5 -1.2 cell division protein FtsZ compare
SMc02582 -2.4 -4.0 hypothetical protein compare
SMc01315 -2.3 -1.8 hypothetical protein compare
SM_b21213 -2.3 -4.8 serinethreonine protein phosphatase compare
SMc00492 -2.3 -1.1 hypothetical protein compare
SMc01147 -2.3 -2.9 coproporphyrinogen III oxidase compare
SMc03072 -2.3 -2.1 hypothetical protein compare
SMc00067 -2.3 -8.2 outer-membranne lipoprotein compare
SMc00580 -2.2 -4.2 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc02850 -2.2 -3.2 DNA polymerase I compare
SMc02753 -2.2 -1.9 PTS system transporter subunit IIA compare
SMc01569 -2.2 -1.8 carbamoyl phosphate synthase small subunit compare
SMc02867 -2.1 -4.0 multidrug-efflux system transmembrane protein compare
SMc02077 -2.0 -3.2 exodeoxyribonuclease III protein compare
SMc00987 -2.0 -2.4 hypothetical protein compare
SMa1570 -2.0 -1.4 PilA2 pilus assembly protein compare
SMc00461 -1.9 -2.2 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMc02641 -1.9 -3.9 UDP-glucose 6-dehydrogenase compare
SM_b20509 -1.9 -1.7 transcriptional regulator compare
SMc01850 -1.9 -2.5 hypothetical protein compare
SMc01187 -1.9 -2.4 rare lipoprotein A compare
SM_b20387 -1.9 -2.2 transcriptional regulator compare
SMc04024 -1.8 -5.1 membrane-bound lytic murein transglycosylase compare
SMc02861 -1.8 -1.9 phosphate transporter compare
SMa2289 -1.8 -1.3 hypothetical protein compare
SMc01845 -1.8 -2.2 transglycosylase transmembrane protein compare
SMc04121 -1.8 -1.9 uracil phosphoribosyltransferase compare
SMc02856 -1.8 -8.0 penicillin-binding protein compare
SMc01360 -1.7 -2.8 aspartate carbamoyltransferase catalytic subunit compare
SMc02694 -1.7 -1.0 ATP-dependent Clp protease adaptor compare
SMc01461 -1.7 -6.4 DNA helicase II protein compare
SMc04330 -1.7 -2.2 trimethylamine methyltransferase compare
SMc00928 -1.7 -1.4 signal peptide protein compare
SMa1924 -1.7 -0.9 hypothetical protein compare
SMc02484 -1.7 -3.3 amino acid efflux transmembrane protein compare
SMa0543 -1.6 -1.8 hypothetical protein compare
SMc02102 -1.6 -3.7 hypothetical protein compare
SMa1700 -1.6 -1.5 hypothetical protein compare
SMc04085 -1.6 -4.7 hypothetical protein compare
SM_b20021 -1.6 -1.0 transcriptional regulator compare
SMa0132 -1.6 -3.4 hypothetical protein compare
SMc02868 -1.6 -3.7 multidrug efflux system protein compare
SMc01438 -1.6 -3.7 protease precursor signal peptide protein compare
SMc02280 -1.5 -1.9 hypothetical protein compare
SMa0789 -1.5 -2.6 GntR family transcriptional regulator compare
SMa1002 -1.5 -1.2 hypothetical protein compare
SMa1365 -1.5 -0.9 ATP-binding protein compare
SMc02778 -1.5 -0.8 hydroxyacid aldolase compare
SMc00334 -1.4 -1.4 cytidylate kinase compare
SM_b20580 -1.4 -2.3 LysR family transcriptional regulator compare
SM_b20075 -1.4 -1.5 hypothetical protein compare
SMc02143 -1.4 -2.2 phosphate ABC transporter permease compare
SMc00355 -1.3 -3.2 hypothetical protein compare
SMc02149 -1.3 -1.2 hypothetical protein compare
SMc01208 -1.3 -1.7 peptidyl-prolyl cis-trans isomerase B protein compare
SMc03242 -1.3 -2.4 GTP-binding protein compare
SMc00823 -1.3 -1.7 hypothetical protein compare
SMc01853 -1.3 -2.9 hypothetical protein compare
SMc00726 -1.3 -0.9 thiol:disulfide interchange redox-active center transmembrane protein compare
SMa0112 -1.2 -2.7 hypothetical protein compare
SMc02758 -1.2 -2.0 nucleotidyl transferase compare
SMa1625 -1.2 -1.9 LysR family transcriptional regulator compare
SMa1456 -1.2 -2.9 hypothetical protein compare
SMc01178 -1.2 -1.1 multidrug transmembrane resistance signal peptide protein compare
SMa1095 -1.2 -0.6 hypothetical protein compare
SM_b21551 -1.2 -0.8 hypothetical protein compare
SMa0872 -1.2 -2.8 hypothetical protein compare
SM_b20450 -1.2 -6.5 regulatory protein compare
SM_b20595 -1.2 -3.0 cell division protein FtsK compare
SMc00296 -1.2 -5.2 POLY3-hydroxybutyrate polymerase compare
SMc03850 -1.2 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02787 -1.2 -1.9 hypothetical protein compare
SMc02363 -1.2 -2.4 cytochrome C-type biogenesis transmembrane protein compare
SM_b20750 -1.2 -1.5 dehydrogenase compare
SMc03182 -1.1 -3.1 pH adaptation potassium efflux system E transmembrane protein compare
SMc02071 -1.1 -1.8 hydrolase glycosidase compare
SMc00650 -1.1 -1.0 hypothetical protein compare
SMc01204 -1.1 -5.1 transmembrane oxidoreductase compare
SM_b20413 -1.1 -0.9 hypothetical protein compare
SMc00760 -1.1 -3.0 recombinase A compare
SMc00073 -1.1 -1.1 hypothetical protein compare
SMc03128 -1.1 -2.6 ABC transporter permease compare
SMc00557 -1.1 -2.9 alanine racemase compare
SMc02041 -1.1 -2.8 short chain dehydrogenase compare
SMc00088 -1.1 -1.5 hypothetical protein compare
SMc02385 -1.1 -1.4 hypothetical protein compare
SMc03140 -1.1 -2.7 transcriptional regulator compare
SMc00856 -1.1 -0.8 hypothetical protein compare
SMc04259 -1.0 -1.9 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) compare
SMc02697 -1.0 -1.3 hypothetical protein compare
SMc01929 -1.0 -2.7 hypothetical protein compare
SM_b21633 -1.0 -0.7 enoyl-CoA hydratase compare
SM_b20054 -1.0 -2.3 non-heme chloroperoxidase compare
SM_b20953 -1.0 -0.8 hypothetical protein compare
SMc02451 -1.0 -0.9 hypothetical protein compare
SMc02724 -1.0 -2.1 hypothetical protein compare
SMc03180 -1.0 -3.1 monovalent cation/H+ antiporter subunit C compare
SM_b20271 -1.0 -1.3 hypothetical protein compare
SM_b20822 -1.0 -2.9 cell surface polysaccharide export ABC-2 transporter permease, close relative to wzm1Y20833 compare
SMc03899 -1.0 -0.6 hypothetical protein compare
SM_b20452 -1.0 -2.1 hypothetical protein compare
SMc00556 -1.0 -4.0 DNA repair protein RadA compare
SMa2215 -1.0 -2.0 GntR family transcriptional regulator compare
SMc05020 -1.0 -1.4 entericidin A precursor compare
SMc03091 -1.0 -3.7 arginase compare
SMc03229 -1.0 -0.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMa1933 -1.0 -1.2 LysR family transcriptional regulator compare
SMc03179 -1.0 -5.4 monovalent cation/H+ antiporter subunit A compare
SM_b20258 -1.0 -2.9 transcriptional regulator compare
SM_b20758 -1.0 -1.8 ArsR family transcriptional regulator compare
SMc01215 -1.0 -1.8 carbamoyl phosphate synthase large subunit compare
SMc02886 -0.9 -1.0 signal peptide protein compare
SMc03100 -0.9 -1.1 hypothetical protein compare
SMc00555 -0.9 -0.8 colicin V production transmembrane protein compare
SMc01260 -0.9 -2.8 transcriptional regulator compare
SM_b20998 -0.9 -4.4 hypothetical protein compare
SMa0760 -0.9 -1.3 FixT2 anti-kinase compare
SM_b20655 -0.9 -1.3 hypothetical protein compare
SMc00511 -0.9 -1.7 D-ribulose-5-phosphate 3-epimerase compare
SMc00184 -0.9 -2.4 tRNA/rRNA methyltransferase compare
SMc00917 -0.9 -2.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc03183 -0.9 -1.9 monovalent cation/H+ antiporter subunit F compare
SMc01146 -0.9 -1.1 deoxyribonucleotide triphosphate pyrophosphatase compare
SMc03181 -0.9 -3.4 monovalent cation/H+ antiporter subunit D compare
SMc01145 -0.9 -1.4 hypothetical protein compare
SMc00255 -0.9 -4.4 hypothetical protein compare
SMc02707 -0.9 -1.5 hypothetical protein compare
SMc00425 -0.9 -1.7 transcriptional regulator compare
SMc02338 -0.9 -0.7 periplasmic binding ABC transporter protein compare
SMc00427 -0.9 -2.1 peptide chain release factor RF-3 protein compare
SMc04404 -0.9 -0.9 amino acid efflux transmembrane protein compare
SMc02718 -0.9 -1.4 hypothetical protein compare
SMc02894 -0.9 -1.7 hypothetical protein compare
SMc01969 -0.8 -2.4 hypothetical protein compare
SMc04406 -0.8 -1.7 hypothetical protein compare
SM_b20880 -0.8 -4.1 ATP-dependent RNA helicase compare
SM_b20400 -0.8 -1.3 hypothetical protein compare
SMc00800 -0.8 -1.1 hypothetical protein compare
SMc00047 -0.8 -2.0 beta-lactamase signal peptide protein compare
SMc00591 -0.8 -3.1 hypothetical protein compare
SM_b21580 -0.8 -0.6 hypothetical protein compare
SMc02979 -0.8 -3.2 hypothetical protein compare
SM_b21140 -0.8 -4.0 transcriptional regulator compare
SMc00302 -0.8 -1.7 hypothetical protein compare
SMa1793 -0.8 -2.1 hypothetical protein compare
SM_b21569 -0.8 -1.0 transcriptional regulator compare
SMc01144 -0.8 -2.9 ribonuclease PH compare
SMc03773 -0.8 -2.2 hypothetical protein compare
SMc01342 -0.8 -1.8 hypothetical protein compare
SMc00579 -0.8 -2.0 dimethyladenosine transferase compare
SMc00948 -0.8 -4.6 glutamine synthetase compare
SMc01458 -0.8 -3.0 transporter compare
SMc01789 -0.8 -1.7 signal peptide protein compare
SM_b21138 -0.8 -2.1 amino acid ABC transporter ATP-binding protein compare
SMc00970 -0.8 -1.1 exodeoxyribonuclease VII small subunit compare
SMc01700 -0.8 -2.4 peptidyl-prolyl cis-trans isomerase A compare
SMa0758 -0.8 -1.0 hypothetical protein compare
SMc02865 -0.8 -1.6 acetyltransferase compare
SM_b20016 -0.8 -2.4 sugar ABC transporter permease compare
SMc04457 -0.8 -1.9 hypothetical protein compare
SMc00540 -0.8 -1.4 hypothetical protein compare
SMc00378 -0.8 -1.5 exodeoxyribonuclease VII large subunit compare
SMa0450 -0.8 -1.0 hypothetical protein compare
SMc04440 -0.8 -2.3 hypothetical protein compare
SMc02425 -0.8 -1.4 transcriptional regulator compare
SMc03127 -0.8 -1.2 ABC transporter permease compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress Thallium(I) acetate across organisms