Experiment set3IT040 for Cupriavidus basilensis FW507-4G11

Compare to:

R2A 37C

200 most important genes:

  gene name fitness t score description  
RR42_RS12050 -3.4 -7.5 DNA polymerase compare
RR42_RS00715 -3.4 -2.3 ferritin compare
RR42_RS26935 -3.1 -6.8 farnesyl-diphosphate farnesyltransferase compare
RR42_RS07150 -2.9 -2.2 hypothetical protein compare
RR42_RS08390 -2.7 -5.4 hypothetical protein compare
RR42_RS02810 -2.4 -2.1 acyl-phosphate glycerol 3-phosphate acyltransferase compare
RR42_RS03095 -2.3 -2.6 succinyl-CoA synthetase subunit beta compare
RR42_RS06630 -2.3 -2.7 integration host factor subunit alpha compare
RR42_RS06255 -2.2 -3.0 lipoprotein compare
RR42_RS18385 -2.2 -4.0 hypothetical protein compare
RR42_RS14360 -2.1 -1.8 tryptophan synthase subunit alpha compare
RR42_RS04225 -2.0 -7.3 hypothetical protein compare
RR42_RS08180 -2.0 -2.1 hypothetical protein compare
RR42_RS07555 -2.0 -2.5 potassium transporter Kup compare
RR42_RS28885 -1.9 -4.8 membrane protein compare
RR42_RS07140 -1.8 -2.1 hypothetical protein compare
RR42_RS33255 -1.7 -4.0 protein-tyrosine phosphatase compare
RR42_RS12615 -1.7 -3.4 LexA family transcriptional regulator compare
RR42_RS22590 -1.6 -1.5 organic hydroperoxide resistance protein compare
RR42_RS02380 -1.6 -5.3 FAD-linked oxidase compare
RR42_RS24510 -1.6 -2.5 hypothetical protein compare
RR42_RS20205 -1.6 -3.6 chromosome partitioning protein compare
RR42_RS13910 -1.5 -5.2 glutamate racemase compare
RR42_RS08470 -1.5 -1.5 hypothetical protein compare
RR42_RS03085 -1.5 -1.4 RecX family transcriptional regulator compare
RR42_RS31435 -1.5 -1.5 hypothetical protein compare
RR42_RS22585 -1.4 -1.1 MarR family transcriptional regulator compare
RR42_RS35695 -1.4 -3.5 flagellar L-ring protein FlgH compare
RR42_RS18270 -1.4 -2.9 murein transglycosylase compare
RR42_RS01260 -1.4 -5.4 lauroyl acyltransferase compare
RR42_RS05500 -1.3 -1.3 preprotein translocase subunit SecG compare
RR42_RS02775 -1.3 -1.4 molecular chaperone SurA compare
RR42_RS21000 -1.3 -2.2 glycosyl transferase compare
RR42_RS33815 -1.3 -1.0 isochorismatase compare
RR42_RS04220 -1.3 -4.1 membrane protein compare
RR42_RS02705 -1.3 -2.8 Holliday junction DNA helicase RuvA compare
RR42_RS08400 -1.3 -1.3 hypothetical protein compare
RR42_RS06635 -1.3 -4.8 MerR family transcriptional regulator compare
RR42_RS20775 -1.3 -1.0 hypothetical protein compare
RR42_RS07235 -1.2 -3.5 hypothetical protein compare
RR42_RS18840 -1.2 -3.6 2-alkenal reductase compare
RR42_RS19090 -1.2 -1.1 cytochrome C compare
RR42_RS25510 -1.2 -1.6 short-chain dehydrogenase compare
RR42_RS03415 -1.2 -4.1 N-acetylmuramoyl-L-alanine amidase compare
RR42_RS31300 -1.2 -1.9 TetR family transcriptional regulator compare
RR42_RS19875 -1.2 -6.1 metalloprotease compare
RR42_RS24930 -1.2 -1.4 AraC family transcriptional regulator compare
RR42_RS34585 -1.2 -1.7 LysR family transcriptional regulator compare
RR42_RS15460 -1.1 -4.7 translocation protein TolB compare
RR42_RS00830 -1.1 -4.5 cell division protein FtsN compare
RR42_RS02440 -1.1 -2.0 membrane protein compare
RR42_RS07360 -1.1 -2.2 ATPase compare
RR42_RS06020 -1.1 -1.1 Fe-S cluster assembly transcriptional regulator IscR compare
RR42_RS08385 -1.1 -1.6 hypothetical protein compare
RR42_RS04320 -1.1 -3.7 cell division protein FtsK compare
RR42_RS12185 -1.1 -1.5 LysR family transcriptional regulator compare
RR42_RS08210 -1.1 -1.1 hypothetical protein compare
RR42_RS08945 -1.1 -1.1 hypothetical protein compare
RR42_RS07615 -1.0 -1.8 3-ketoacyl-ACP reductase compare
RR42_RS15740 -1.0 -1.6 hypothetical protein compare
RR42_RS15225 -1.0 -1.6 RNA-binding protein compare
RR42_RS27550 -1.0 -1.1 hypothetical protein compare
RR42_RS07890 -1.0 -1.5 hypothetical protein compare
RR42_RS07565 -1.0 -5.5 transcription accessory protein compare
RR42_RS15745 -1.0 -4.1 group1 glycosyl transferase compare
RR42_RS16240 -1.0 -1.3 cobalamin biosynthesis protein CbiX compare
RR42_RS17635 -1.0 -3.1 magnesium transporter CorA compare
RR42_RS09580 -1.0 -1.0 hypothetical protein compare
RR42_RS13595 -1.0 -2.4 hypothetical protein compare
RR42_RS03560 -1.0 -1.4 hypothetical protein compare
RR42_RS15450 -1.0 -2.4 Tol system periplasmic component YbgF compare
RR42_RS03130 -1.0 -4.3 hypothetical protein compare
RR42_RS21220 -1.0 -1.1 iron transporter FeoB compare
RR42_RS06895 -1.0 -2.5 hypothetical protein compare
RR42_RS31625 -0.9 -2.3 amino acid ABC transporter compare
RR42_RS07870 -0.9 -2.9 alkyl hydroperoxide reductase compare
RR42_RS12015 -0.9 -2.1 dihydrolipoamide acyltransferase compare
RR42_RS06875 -0.9 -1.0 hypothetical protein compare
RR42_RS15135 -0.9 -3.2 LysR family transcriptional regulator compare
RR42_RS04205 -0.9 -1.4 glycine cleavage system regulatory protein compare
RR42_RS12020 -0.9 -1.5 GCN5 family acetyltransferase compare
RR42_RS06450 -0.9 -4.3 membrane protein compare
RR42_RS33575 -0.9 -1.7 hypothetical protein compare
RR42_RS19765 -0.9 -1.6 arsenate reductase compare
RR42_RS04700 -0.9 -1.0 ribonuclease G compare
RR42_RS19045 -0.9 -1.0 frataxin compare
RR42_RS15180 -0.9 -1.4 hypothetical protein compare
RR42_RS27290 -0.8 -1.4 hypothetical protein compare
RR42_RS35725 -0.8 -1.8 flagellar biosynthesis protein FlgB compare
RR42_RS23595 -0.8 -2.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
RR42_RS06810 -0.8 -1.8 hypothetical protein compare
RR42_RS06355 -0.8 -2.9 Fe-S cluster assembly protein HesB compare
RR42_RS12455 -0.8 -4.1 protein disaggregation chaperone compare
RR42_RS10270 -0.8 -3.1 hypothetical protein compare
RR42_RS10465 -0.8 -1.3 hypothetical protein compare
RR42_RS06325 -0.8 -1.2 serine O-acetyltransferase compare
RR42_RS31495 -0.8 -1.3 Cro/Cl family transcriptional regulator compare
RR42_RS00360 -0.8 -1.1 Asp/Glu/hydantoin racemase compare
RR42_RS12240 -0.8 -0.6 hypothetical protein compare
RR42_RS14965 -0.8 -2.7 hypothetical protein compare
RR42_RS17595 -0.8 -1.9 hypothetical protein compare
RR42_RS20790 -0.8 -2.3 isoprenylcysteine carboxyl methyltransferase compare
RR42_RS04815 -0.8 -3.4 glycine/betaine ABC transporter substrate-binding protein compare
RR42_RS06280 -0.8 -3.2 membrane protein compare
RR42_RS15475 -0.8 -3.3 protein tolQ compare
RR42_RS06230 -0.8 -2.6 hypothetical protein compare
RR42_RS25640 -0.8 -1.6 3-hydroxyisobutyrate dehydrogenase compare
RR42_RS08030 -0.8 -1.6 hypothetical protein compare
RR42_RS20965 -0.8 -1.6 transferase compare
RR42_RS15775 -0.8 -3.3 N-acetylneuraminate synthase compare
RR42_RS15455 -0.7 -2.7 membrane protein compare
RR42_RS18855 -0.7 -1.9 preprotein translocase compare
RR42_RS10415 -0.7 -0.8 hypothetical protein compare
RR42_RS08855 -0.7 -2.4 hypothetical protein compare
RR42_RS12860 -0.7 -1.4 pseudouridine synthase compare
RR42_RS27045 -0.7 -1.4 hypothetical protein compare
RR42_RS09590 -0.7 -1.7 hypothetical protein compare
RR42_RS09625 -0.7 -2.7 cation transporter compare
RR42_RS02250 -0.7 -1.8 GntR family transcriptional regulator compare
RR42_RS15785 -0.7 -3.0 glycosyl transferase family 28 compare
RR42_RS17105 -0.7 -3.9 Clp protease ClpX compare
RR42_RS18670 -0.7 -1.9 metal-dependent hydrolase compare
RR42_RS23120 -0.7 -2.2 hypothetical protein compare
RR42_RS04980 -0.7 -1.0 hypothetical protein compare
RR42_RS25070 -0.7 -2.7 membrane protein compare
RR42_RS31125 -0.7 -1.8 hypothetical protein compare
RR42_RS12085 -0.7 -1.2 glyoxalase compare
RR42_RS23650 -0.7 -1.2 flagellar protein compare
RR42_RS27210 -0.7 -1.8 hypothetical protein compare
RR42_RS04850 -0.7 -1.4 hypothetical protein compare
RR42_RS19750 -0.7 -0.9 MBL fold metallo-hydrolase compare
RR42_RS17510 -0.7 -4.5 chemotaxis protein CheY compare
RR42_RS32235 -0.7 -2.7 hopanoid biosynthesis associated radical SAM protein HpnH compare
RR42_RS15090 -0.7 -2.5 DNA helicase compare
RR42_RS24665 -0.7 -1.6 hypothetical protein compare
RR42_RS27530 -0.7 -1.7 hypothetical protein compare
RR42_RS14045 -0.7 -1.9 membrane protein compare
RR42_RS33430 -0.7 -1.2 LysR family transcriptional regulator compare
RR42_RS07945 -0.7 -1.6 ABC transporter permease compare
RR42_RS09325 -0.7 -2.2 citrate synthase compare
RR42_RS25225 -0.7 -1.4 NAD(P) transhydrogenase compare
RR42_RS01415 -0.7 -2.1 glutathione S-transferase compare
RR42_RS16765 -0.7 -1.8 glycerol kinase compare
RR42_RS13015 -0.7 -3.4 fatty acid hydroxylase compare
RR42_RS22790 -0.7 -2.3 MmgE/PrpD family protein compare
RR42_RS16220 -0.6 -0.7 DNA polymerase III subunit chi compare
RR42_RS06860 -0.6 -0.9 hypothetical protein compare
RR42_RS05610 -0.6 -2.4 dehydratase compare
RR42_RS07245 -0.6 -1.6 hypothetical protein compare
RR42_RS04535 -0.6 -2.2 cysteine synthase compare
RR42_RS32155 -0.6 -2.9 hypothetical protein compare
RR42_RS34935 -0.6 -1.0 cytochrome C oxidase subunit IV compare
RR42_RS09630 -0.6 -1.2 hypothetical protein compare
RR42_RS27695 -0.6 -1.6 polyketide cyclase compare
RR42_RS26275 -0.6 -1.1 CopG family transcriptional regulator compare
RR42_RS01820 -0.6 -3.1 peptidase S41 compare
RR42_RS15705 -0.6 -2.1 glycosyl transferase family 1 compare
RR42_RS15800 -0.6 -1.4 aldo/keto reductase compare
RR42_RS08795 -0.6 -1.4 molybdopterin-guanine dinucleotide biosynthesis protein B compare
RR42_RS18315 -0.6 -2.6 toxin compare
RR42_RS33355 -0.6 -1.7 membrane protein compare
RR42_RS17720 -0.6 -0.7 sugar kinase compare
RR42_RS36105 -0.6 -1.4 MarR family transcriptional regulator compare
RR42_RS14150 -0.6 -2.6 haloacid dehalogenase compare
RR42_RS33425 -0.6 -1.8 cobalt-zinc-cadmium resistance protein compare
RR42_RS09635 -0.6 -1.4 membrane protein compare
RR42_RS17620 -0.6 -2.7 phosphatidylglycerophosphatase compare
RR42_RS03725 -0.6 -1.8 magnesium transporter CorA compare
RR42_RS03680 -0.6 -2.0 hypothetical protein compare
RR42_RS08350 -0.6 -1.0 hypothetical protein compare
RR42_RS13730 -0.6 -1.3 TetR family transcriptional regulator compare
RR42_RS36700 -0.6 -2.3 multidrug transporter compare
RR42_RS34610 -0.6 -1.2 hydroxyacid dehydrogenase compare
RR42_RS08395 -0.6 -2.3 hypothetical protein compare
RR42_RS32430 -0.6 -1.5 SAM-dependent methyltransferase compare
RR42_RS09085 -0.6 -1.1 C4-dicarboxylate ABC transporter permease compare
RR42_RS26450 -0.6 -1.9 histidinol dehydrogenase compare
RR42_RS05620 -0.6 -1.3 esterase compare
RR42_RS36065 -0.6 -2.8 ABC transporter substrate-binding protein compare
RR42_RS30835 -0.6 -2.6 hypothetical protein compare
RR42_RS29280 -0.6 -0.9 hypothetical protein compare
RR42_RS36400 -0.6 -0.9 hypothetical protein compare
RR42_RS15015 -0.6 -0.6 exodeoxyribonuclease VII small subunit compare
RR42_RS11005 -0.6 -2.3 4-hydroxybutyrate dehydrogenase compare
RR42_RS07225 -0.6 -0.8 hypothetical protein compare
RR42_RS37425 -0.6 -2.1 hypothetical protein compare
RR42_RS12090 -0.6 -1.9 monooxygenase compare
RR42_RS01330 -0.6 -2.0 Fis family transcriptional regulator compare
RR42_RS19005 -0.6 -2.2 3-dehydroquinate synthase compare
RR42_RS21020 -0.6 -1.8 hypothetical protein compare
RR42_RS11180 -0.6 -1.9 peptidylprolyl isomerase compare
RR42_RS00665 -0.6 -2.6 pyrrolidone-carboxylate peptidase compare
RR42_RS09230 -0.6 -3.4 hemolysin D compare
RR42_RS27700 -0.6 -0.5 hypothetical protein compare
RR42_RS33260 -0.6 -2.7 multidrug MFS transporter compare
RR42_RS07630 -0.6 -1.2 methyltransferase type 12 compare
RR42_RS33845 -0.6 -1.9 MerR family transcriptional regulator compare
RR42_RS30945 -0.6 -2.3 cytochrome C peroxidase compare
RR42_RS17555 -0.6 -0.8 hypothetical protein compare
RR42_RS20075 -0.6 -2.1 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment