Experiment set3IT039 for Sinorhizobium meliloti 1021

Compare to:

LB with Paraquat dichloride 0.3 mg/ml

200 most important genes:

  gene name fitness t score description  
SMc02147 -4.8 -7.3 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc01217 -4.6 -12.1 transport transmembrane protein conserved
SMc02140 -4.3 -1.6 phosphate regulon transcriptional regulatory protein compare
SMa1365 -4.3 -2.0 ATP-binding protein compare
SMc01147 -4.2 -5.0 coproporphyrinogen III oxidase compare
SMc00876 -4.1 -7.7 ATP-binding MRP protein compare
SMc04121 -4.0 -1.4 uracil phosphoribosyltransferase compare
SMc03849 -3.8 -1.7 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02363 -3.8 -3.7 cytochrome C-type biogenesis transmembrane protein compare
SMc01880 -3.7 -2.6 pantoate--beta-alanine ligase compare
SMc00619 -3.7 -2.5 hypothetical protein compare
SMc03127 -3.7 -2.7 ABC transporter permease compare
SMc02362 -3.7 -3.5 cytochrome c-type biogenesis protein CcmE compare
SMc02144 -3.6 -5.4 phosphate ABC transporter permease compare
SMc02753 -3.5 -1.9 PTS system transporter subunit IIA compare
SMc02850 -3.4 -4.7 DNA polymerase I compare
SMc02115 -3.3 -1.2 hypothetical protein compare
SMc00914 -3.3 -3.4 oxidoreductase compare
SMc03763 -3.3 -4.6 cytosine-specific methyltransferase compare
SMa0789 -3.3 -3.9 GntR family transcriptional regulator compare
SMc02145 -2.9 -1.1 signal peptide protein compare
SMc02142 -2.9 -5.8 phosphate transporter ATP-binding protein compare
SMc01881 -2.7 -3.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02833 -2.7 -2.5 penicillin-insensitive murein endopeptidase compare
SM_b20021 -2.6 -1.2 transcriptional regulator compare
SMc02495 -2.5 -0.8 translaldolase compare
SMc02143 -2.5 -3.5 phosphate ABC transporter permease compare
SMc03242 -2.4 -3.0 GTP-binding protein compare
SMc03878 -2.4 -2.4 acetoacetyl-CoA reductase compare
SMc01215 -2.4 -4.1 carbamoyl phosphate synthase large subunit compare
SMc03978 -2.3 -4.5 transketolase compare
SMc00492 -2.3 -1.0 hypothetical protein compare
SMc01208 -2.3 -2.8 peptidyl-prolyl cis-trans isomerase B protein compare
SMc02102 -2.3 -3.7 hypothetical protein compare
SMc04224 -2.3 -1.4 hypothetical protein compare
SMc02867 -2.3 -3.9 multidrug-efflux system transmembrane protein compare
SMc02719 -2.2 -1.3 transposase compare
SMc02451 -2.2 -1.6 hypothetical protein compare
SMc00963 -2.2 -1.9 hypothetical protein compare
SMc01337 -2.2 -1.6 hypothetical protein compare
SMc02232 -2.2 -2.3 hypothetical protein compare
SMc02234 -2.1 -2.7 hypothetical protein compare
SMc02697 -2.1 -1.6 hypothetical protein compare
SMc02114 -2.1 -4.5 hypothetical protein compare
SMc00726 -2.1 -1.1 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc00987 -2.1 -2.6 hypothetical protein compare
SMc04085 -2.1 -3.3 hypothetical protein compare
SMc01183 -2.1 -1.8 LexA repressor compare
SMc00451 -2.0 -6.2 processing protease compare
SMc01361 -2.0 -5.9 dihydroorotase compare
SMc01280 -2.0 -1.3 protease compare
SMc00302 -2.0 -1.7 hypothetical protein compare
SMc00580 -2.0 -3.0 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc01850 -2.0 -2.7 hypothetical protein compare
SMc03850 -1.9 -1.1 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc00461 -1.9 -1.3 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMc02856 -1.9 -8.4 penicillin-binding protein compare
SMc01360 -1.9 -3.2 aspartate carbamoyltransferase catalytic subunit compare
SM_b21213 -1.9 -4.2 serinethreonine protein phosphatase compare
SMc00067 -1.9 -6.1 outer-membranne lipoprotein compare
SM_b20452 -1.9 -2.6 hypothetical protein compare
SMc02778 -1.9 -1.0 hydroxyacid aldolase compare
SMc01569 -1.8 -1.5 carbamoyl phosphate synthase small subunit compare
SMc00143 -1.8 -1.7 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
SMc02505 -1.8 -1.6 hypothetical protein compare
SMc00053 -1.7 -0.8 monovalent cation/H+ antiporter subunit C compare
SMc04296 -1.7 -1.0 cell division protein FtsZ compare
SM_b20105 -1.7 -1.7 transcriptional regulator compare
SMc01438 -1.6 -4.5 protease precursor signal peptide protein compare
SM_b20758 -1.6 -1.8 ArsR family transcriptional regulator compare
SM_b20953 -1.6 -1.0 hypothetical protein compare
SMa1323 -1.6 -2.1 Transcription regulator compare
SMc04330 -1.6 -2.0 trimethylamine methyltransferase compare
SMc03100 -1.5 -1.7 hypothetical protein compare
SMa0964 -1.5 -3.3 hypothetical protein compare
SMa0112 -1.5 -2.9 hypothetical protein compare
SMc00982 -1.5 -5.2 dioxygenase compare
SMc00286 -1.5 -1.6 hemolysin-type calcium-binding protein compare
SM_b20822 -1.5 -4.6 cell surface polysaccharide export ABC-2 transporter permease, close relative to wzm1Y20833 compare
SMc01144 -1.5 -3.2 ribonuclease PH compare
SMc01472 -1.4 -0.8 50S ribosomal protein L11 methyltransferase compare
SMc00295 -1.4 -1.2 hypothetical protein compare
SMc00981 -1.4 -4.7 ferredoxin protein compare
SMc01419 -1.4 -1.5 RNA polymerase sigma factor protein compare
SMc02149 -1.4 -1.3 hypothetical protein compare
SMa1547 -1.4 -3.6 protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) compare
SMc02435 -1.4 -1.7 methyltransferase compare
SMc01568 -1.4 -1.2 hypothetical protein compare
SMc02484 -1.4 -3.0 amino acid efflux transmembrane protein compare
SMc02046 -1.4 -1.9 hypothetical protein compare
SMc02868 -1.3 -3.7 multidrug efflux system protein compare
SMc02894 -1.3 -1.4 hypothetical protein compare
SMc00557 -1.3 -3.7 alanine racemase compare
SMc02641 -1.3 -2.6 UDP-glucose 6-dehydrogenase compare
SMc01461 -1.3 -4.8 DNA helicase II protein compare
SMc01347 -1.3 -3.6 hypothetical protein compare
SMc01447 -1.3 -0.9 hypothetical protein compare
SMc04298 -1.3 -2.5 hypothetical protein compare
SMa0343 -1.3 -2.1 hypothetical protein compare
SMc03182 -1.3 -3.3 pH adaptation potassium efflux system E transmembrane protein compare
SMc01342 -1.3 -4.3 hypothetical protein compare
SM_b20516 -1.3 -3.0 response regulator protein compare
SMa0955 -1.3 -1.5 GntR family transcriptional regulator compare
SMc03774 -1.3 -1.1 hypothetical protein compare
SMc03180 -1.3 -3.4 monovalent cation/H+ antiporter subunit C compare
SMc02510 -1.3 -0.7 ferric uptake regulation protein compare
SMc00045 -1.2 -1.4 cytochrome C signal peptide protein compare
SMc03158 -1.2 -1.5 ABC transporter permease compare
SMc02474 -1.2 -2.2 ABC transporter ATP-binding protein compare
SMc02909 -1.2 -1.4 transglycosylase transmembrane protein compare
SMc00298 -1.2 -4.8 methionine aminopeptidase compare
SMa0448 -1.2 -1.6 hypothetical protein compare
SMc01974 -1.2 -2.1 transcriptional regulator compare
SMc04024 -1.2 -3.2 membrane-bound lytic murein transglycosylase compare
SMa2034 -1.2 -1.3 hypothetical protein compare
SMc02724 -1.2 -2.2 hypothetical protein compare
SM_b21174 -1.2 -3.1 phosphate uptake ABC transporter permease compare
SMc02562 -1.2 -4.6 phosphoenolpyruvate carboxykinase compare
SMa1053 -1.1 -1.0 hypothetical protein compare
SMc04232 -1.1 -1.2 glycine rich transmembrane protein compare
SMc00019 -1.1 -1.7 hypothetical protein compare
SMc01034 -1.1 -1.9 hypothetical protein compare
SMc00555 -1.1 -0.9 colicin V production transmembrane protein compare
SMc00088 -1.1 -1.4 hypothetical protein compare
SMc00404 -1.1 -0.7 hypothetical protein compare
SMc02228 -1.1 -4.0 acetyl-CoA acetyltransferase compare
SMc01119 -1.1 -1.3 hypothetical protein compare
SM_b20555 -1.1 -3.2 hypothetical protein compare
SMc02077 -1.1 -1.7 exodeoxyribonuclease III protein compare
SMc02550 -1.1 -1.7 hypothetical protein compare
SMc04242 -1.1 -1.5 zinc uptake regulation protein compare
SMa5010 -1.1 -0.8 hypothetical protein compare
SMc00397 -1.1 -2.3 hypothetical protein compare
SMc00352 -1.1 -0.8 acetyltransferase compare
SMc00081 -1.0 -3.1 hypothetical protein compare
SMc00511 -1.0 -2.2 D-ribulose-5-phosphate 3-epimerase compare
SMc02716 -1.0 -2.2 hypothetical protein compare
SM_b20509 -1.0 -1.6 transcriptional regulator compare
SM_b20260 -1.0 -1.7 hypothetical protein compare
SMc01939 -1.0 -1.0 urease subunit beta compare
SM_b21373 -1.0 -2.4 D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] (from data) compare
SMa0142 -1.0 -3.6 protease compare
SMc02582 -1.0 -2.3 hypothetical protein compare
SMc03140 -1.0 -2.1 transcriptional regulator compare
SMa1924 -1.0 -0.6 hypothetical protein compare
SMc01770 -1.0 -1.2 serine hydroxymethyltransferase compare
SMa1036 -1.0 -3.4 hypothetical protein compare
SMc00579 -1.0 -2.0 dimethyladenosine transferase compare
SMc02544 -1.0 -0.7 hypothetical protein compare
SMc00602 -1.0 -2.7 excinuclease ABC subunit C compare
SM_b21175 -1.0 -1.6 phosphate uptake ABC transporter permease compare
SMc01969 -1.0 -4.3 hypothetical protein compare
SMa0992 -0.9 -1.2 hypothetical protein compare
SMc00331 -0.9 -3.2 hypothetical protein compare
SM_b21108 -0.9 -2.6 L-fucose mutarotase (EC 5.1.3.29) (from data) compare
SMa0575 -0.9 -1.5 hypothetical protein compare
SMc00484 -0.9 -3.1 hypothetical protein compare
SMc01458 -0.9 -3.7 transporter compare
SMc00815 -0.9 -0.7 inosine 5'-monophosphate dehydrogenase compare
SM_b20323 -0.9 -0.8 transcriptional regulator compare
SMc03801 -0.9 -1.4 thioredoxin protein compare
SMa1894 -0.9 -1.7 methionine sulfoxide reductase B compare
SMc01877 -0.9 -3.0 DNA repair protein compare
SMc00800 -0.9 -1.2 hypothetical protein compare
SMc01204 -0.9 -4.0 transmembrane oxidoreductase compare
SMa5033 -0.9 -0.7 hypothetical protein compare
SMa1427 -0.9 -2.5 ABC transporter substrate-binding protein compare
SMc01146 -0.9 -1.0 deoxyribonucleotide triphosphate pyrophosphatase compare
SMc00959 -0.9 -1.4 hypothetical protein compare
SMc02564 -0.9 -1.3 LysM domain/BON superfamily protein compare
SMc04202 -0.9 -2.1 transmembrane protein compare
SMc01235 -0.9 -5.4 excinuclease ABC subunit A compare
SMc03748 -0.9 -3.1 hypothetical protein compare
SM_b20647 -0.9 -1.7 hypothetical protein compare
SMc02785 -0.9 -3.2 lytic murein transglycosylase A protein compare
SMc01845 -0.9 -0.7 transglycosylase transmembrane protein compare
SM_b21668 -0.9 -1.8 hypothetical protein compare
SM_b20750 -0.9 -0.9 dehydrogenase compare
SM_b21176 -0.9 -2.1 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc02279 -0.9 -2.0 signal peptide protein compare
SMa0740 -0.9 -0.6 hypothetical protein compare
SM_b20921 -0.9 -1.1 hypothetical protein compare
SMc02141 -0.9 -1.4 phosphate transporter PhoU compare
SMc01800 -0.9 -1.1 cytochrome C oxidase assembly transmembrane protein compare
SMa1201 -0.9 -1.5 hypothetical protein compare
SM_b22002 -0.8 -1.6 epoxide hydrolase compare
SMc02739 -0.8 -1.4 glycine betaine transport ATP-binding ABC transporter protein compare
SM_b20884 -0.8 -1.5 hypothetical protein compare
SM_b21361 -0.8 -2.5 hypothetical protein compare
SMc01258 -0.8 -2.8 hypothetical protein compare
SMc00970 -0.8 -1.1 exodeoxyribonuclease VII small subunit compare
SMc02593 -0.8 -1.7 hypothetical protein compare
SMc04210 -0.8 -2.8 hypothetical protein compare
SMa0232 -0.8 -2.2 hypothetical protein compare
SMc02583 -0.8 -2.5 hypothetical protein compare
SM_b20117 -0.8 -1.2 sugar transferase compare
SM_b20450 -0.8 -4.2 regulatory protein compare
SMc02738 -0.8 -2.7 glycine betaine transport system permease ABC transporter protein compare
SMc02051 -0.8 -1.2 hypothetical protein compare
SMa1118 -0.8 -1.0 HspC2 heat shock protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Paraquat dichloride in Sinorhizobium meliloti 1021

For stress Paraquat dichloride across organisms