Experiment set3IT039 for Methanococcus maripaludis JJ

200 most detrimental genes:

gene	name	fitness	t score	description
MMJJ_RS04415		+2.3	13.4	hypothetical protein
MMJJ_RS04005		+0.8	6.6	acetate--CoA ligase family protein
MMJJ_RS08830		+0.7	2.9	hypothetical protein
MMJJ_RS05685		+0.6	4.3	class III signal peptide-containing protein
MMJJ_RS05915		+0.6	2.4	multiprotein bridging factor aMBF1
MMJJ_RS03250		+0.6	1.9	DUF2116 family Zn-ribbon domain-containing protein
MMJJ_RS07235		+0.6	5.3	coenzyme F420 hydrogenase subunit alpha
MMJJ_RS07920		+0.6	4.4	6-carboxytetrahydropterin synthase QueD
MMJJ_RS03725		+0.6	2.6	sulfurtransferase TusA family protein
MMJJ_RS04375		+0.5	2.3	hypothetical protein
MMJJ_RS07240		+0.5	4.5	MBL fold metallo-hydrolase
MMJJ_RS09120		+0.5	0.7	aspartate kinase
MMJJ_RS02270		+0.5	2.4	HEPN domain-containing protein
MMJJ_RS08225		+0.5	1.7	peptidylprolyl isomerase
MMJJ_RS06275		+0.5	2.4	hypothetical protein
MMJJ_RS06190		+0.5	3.5	7-cyano-7-deazaguanine synthase
MMJJ_RS07185		+0.5	1.6	DUF371 domain-containing protein
MMJJ_RS05040		+0.5	3.2	7-carboxy-7-deazaguanine synthase QueE
MMJJ_RS07230		+0.5	3.2	coenzyme F420-reducing hydrogenase, FrhD protein
MMJJ_RS07220		+0.4	3.5	coenzyme F420 hydrogenase subunit beta
MMJJ_RS06210		+0.4	2.3	hypothetical protein
MMJJ_RS06810		+0.4	3.5	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
MMJJ_RS06770		+0.4	3.4	hypothetical protein
MMJJ_RS07680		+0.4	3.0	glucose-6-phosphate isomerase
MMJJ_RS07225		+0.4	2.7	coenzyme F420 hydrogenase subunit gamma
MMJJ_RS08515		+0.4	1.8	secondary thiamine-phosphate synthase enzyme YjbQ
MMJJ_RS06735		+0.4	2.9	cobalt ECF transporter T component CbiQ
MMJJ_RS07025		+0.4	2.0	tRNA (cytidine(56)-2'-O)-methyltransferase
MMJJ_RS06680		+0.4	2.0	DUF366 family protein
MMJJ_RS06675		+0.4	3.1	TIGR01212 family radical SAM protein
MMJJ_RS07210		+0.4	3.1	AmmeMemoRadiSam system protein B
MMJJ_RS06710		+0.4	3.1	TldD/PmbA family protein
MMJJ_RS05525		+0.4	2.3	GTP-binding protein
MMJJ_RS06740		+0.4	2.3	energy-coupling factor ABC transporter substrate-binding protein
MMJJ_RS06745		+0.4	2.4	energy-coupling factor ABC transporter permease
MMJJ_RS07915		+0.4	1.7	CBS domain-containing protein
MMJJ_RS08520		+0.4	1.4	peptidylprolyl isomerase
MMJJ_RS07820		+0.4	2.9	bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
MMJJ_RS06470		+0.4	2.7	tripartite tricarboxylate transporter permease
MMJJ_RS05350		+0.4	1.7	DUF192 domain-containing protein
MMJJ_RS04105		+0.4	3.2	prepilin peptidase
MMJJ_RS07450		+0.4	2.1	hypothetical protein
MMJJ_RS07795		+0.4	2.4	cupin domain-containing protein
MMJJ_RS07015		+0.4	0.7	PFL family protein
MMJJ_RS07445		+0.4	2.8	RlmF-related methyltransferase
MMJJ_RS06505		+0.4	1.2	prephenate dehydratase
MMJJ_RS08100		+0.4	2.1	hypothetical protein
MMJJ_RS06205		+0.4	2.5	EamA family transporter
MMJJ_RS09360		+0.4	2.5	hypothetical protein
MMJJ_RS05520		+0.3	2.8	H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein
MMJJ_RS03775		+0.3	1.1	50S ribosomal protein L15e
MMJJ_RS06540		+0.3	1.0	DUF2120 domain-containing protein
MMJJ_RS06515		+0.3	2.9	ribonuclease III
MMJJ_RS04955		+0.3	2.2	tRNA pseudouridine(54/55) synthase Pus10
MMJJ_RS01855		+0.3	2.8	MBL fold metallo-hydrolase
MMJJ_RS06090		+0.3	2.1	hypothetical protein
MMJJ_RS03360		+0.3	0.5	hypothetical protein
MMJJ_RS08390		+0.3	0.9	carboxymuconolactone decarboxylase family protein
MMJJ_RS06500		+0.3	2.3	class I SAM-dependent methyltransferase
MMJJ_RS03835		+0.3	1.4	DUF504 domain-containing protein
MMJJ_RS06790		+0.3	2.7	nucleotidyltransferase family protein
MMJJ_RS07610		+0.3	2.0	DUF2119 domain-containing protein
MMJJ_RS05580		+0.3	2.1	methanogenesis marker 9 domain-containing protein
MMJJ_RS06440		+0.3	2.0	DUF4870 domain-containing protein
MMJJ_RS09230		+0.3	1.6	hypothetical protein
MMJJ_RS07750		+0.3	0.6	class III signal peptide-containing protein
MMJJ_RS05960		+0.3	2.2	DUF169 domain-containing protein
MMJJ_RS03605		+0.3	1.2	TIGR00297 family protein
MMJJ_RS06460		+0.3	2.0	cytochrome c
MMJJ_RS05400		+0.3	1.7	CoA-binding protein
MMJJ_RS04545		+0.3	0.9	PadR family transcriptional regulator
MMJJ_RS07270		+0.3	2.4	ribonuclease HII
MMJJ_RS01395		+0.3	1.8	DUF1894 domain-containing protein
MMJJ_RS07280		+0.3	1.7	phosphomannomutase/phosphoglucomutase
MMJJ_RS06960		+0.3	2.6	CAP domain-containing protein
MMJJ_RS08455		+0.3	1.6	tetratricopeptide repeat protein
MMJJ_RS06535		+0.3	2.4	UPF0104 family protein
MMJJ_RS01825		+0.3	1.8	DNA repair and recombination protein RadB
MMJJ_RS06455		+0.3	2.3	YeeE/YedE family protein
MMJJ_RS07825		+0.3	1.2	YciI family protein
MMJJ_RS09255		+0.3	1.3	hypothetical protein
MMJJ_RS07480		+0.3	2.3	FAD-dependent oxidoreductase
MMJJ_RS06950		+0.3	2.1	4-demethylwyosine synthase TYW1
MMJJ_RS04850		+0.3	1.7	energy-coupling factor transporter transmembrane protein EcfT
MMJJ_RS07200		+0.3	2.2	MFS transporter
MMJJ_RS08375		+0.3	2.1	ferritin
MMJJ_RS06765		+0.3	2.3	hypothetical protein
MMJJ_RS03730		+0.3	1.8	SWIM zinc finger family protein
MMJJ_RS07800		+0.3	2.2	AMP-binding protein
MMJJ_RS01010		+0.3	2.5	right-handed parallel beta-helix repeat-containing protein
MMJJ_RS00745		+0.3	1.4	hypothetical protein
MMJJ_RS07760		+0.3	1.6	GNAT family N-acetyltransferase
MMJJ_RS06585		+0.3	1.8	alanine racemase
MMJJ_RS06085		+0.3	1.2	proteasome assembly chaperone family protein
MMJJ_RS08160		+0.3	1.4	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
MMJJ_RS07495		+0.3	1.6	4Fe-4S binding protein
MMJJ_RS03515		+0.3	1.9	GPR1/FUN34/YaaH family transporter
MMJJ_RS00785		+0.3	0.5	hypothetical protein
MMJJ_RS04345		+0.3	1.2	DUF2080 family transposase-associated protein
MMJJ_RS02115		+0.3	1.9	class I SAM-dependent methyltransferase family protein
MMJJ_RS07885		+0.2	1.9	NERD domain-containing protein
MMJJ_RS05975		+0.2	1.8	sulfurtransferase TusA family protein
MMJJ_RS01100		+0.2	0.7	helix-turn-helix domain-containing protein
MMJJ_RS06665		+0.2	0.9	DUF3236 domain-containing protein
MMJJ_RS06580		+0.2	1.9	alanine dehydrogenase
MMJJ_RS06385		+0.2	1.2	hypothetical protein
MMJJ_RS08310		+0.2	1.5	ZIP family metal transporter
MMJJ_RS05090		+0.2	1.2	MGMT family protein
MMJJ_RS03450		+0.2	1.4	hypothetical protein
MMJJ_RS07385		+0.2	1.8	ribosomal protein S18-alanine N-acetyltransferase
MMJJ_RS08485		+0.2	0.9	Lrp/AsnC family transcriptional regulator
MMJJ_RS04215		+0.2	2.0	DMT family transporter
MMJJ_RS07215		+0.2	1.9	TIGR00341 family protein
MMJJ_RS06045		+0.2	1.4	hypothetical protein
MMJJ_RS05510		+0.2	1.8	archaellum operon transcriptional activator EarA family protein
MMJJ_RS05355		+0.2	1.6	DUF2121 domain-containing protein
MMJJ_RS05500		+0.2	2.0	hypothetical protein
MMJJ_RS05700		+0.2	1.6	metallophosphoesterase
MMJJ_RS06800		+0.2	1.5	prefoldin subunit alpha
MMJJ_RS04340		+0.2	1.0	hypothetical protein
MMJJ_RS01790		+0.2	1.6	pyridoxamine 5'-phosphate oxidase family protein
MMJJ_RS07815		+0.2	1.7	2-oxoacid:acceptor oxidoreductase family protein
MMJJ_RS01530		+0.2	0.6	YwbE family protein
MMJJ_RS00145		+0.2	1.7	aquaporin family protein
MMJJ_RS00615		+0.2	1.0	nucleoside deaminase
MMJJ_RS02165		+0.2	1.6	ABC transporter substrate-binding protein
MMJJ_RS07175		+0.2	1.7	DEAD/DEAH box helicase
MMJJ_RS06685		+0.2	1.8	S-layer protein
MMJJ_RS00150		+0.2	1.2	DUF2180 family protein
MMJJ_RS07740		+0.2	1.5	DUF2334 domain-containing protein
MMJJ_RS00555		+0.2	1.4	hypothetical protein
MMJJ_RS00500		+0.2	0.9	GNAT family N-acetyltransferase
MMJJ_RS03715		+0.2	1.3	hypothetical protein
MMJJ_RS05660		+0.2	1.3	sulfopyruvate decarboxylase subunit beta
MMJJ_RS07035		+0.2	0.3	glycosyl transferase
MMJJ_RS06135		+0.2	1.7	50S ribosomal protein L11 methyltransferase
MMJJ_RS05505		+0.2	1.9	hypothetical protein
MMJJ_RS03905		+0.2	1.2	ATP-binding cassette domain-containing protein
MMJJ_RS08350		+0.2	1.8	heavy metal translocating P-type ATPase
MMJJ_RS06590		+0.2	1.6	sodium:alanine symporter family protein
MMJJ_RS07890		+0.2	1.2	pyrimidine dimer DNA glycosylase/endonuclease V
MMJJ_RS07835		+0.2	1.4	UPF0489 family protein
MMJJ_RS02230		+0.2	1.6	hypothetical protein
MMJJ_RS05900		+0.2	1.5	ATP-binding cassette domain-containing protein
MMJJ_RS09365		+0.2	0.6	hypothetical protein
MMJJ_RS06430		+0.2	1.2	haloacid dehalogenase
MMJJ_RS03945		+0.2	1.3	mechanosensitive ion channel family protein
MMJJ_RS03285		+0.2	1.0	gamma-glutamylcyclotransferase
MMJJ_RS07985		+0.2	0.9	hypothetical protein
MMJJ_RS08305		+0.2	1.0	peroxiredoxin
MMJJ_RS04390		+0.2	1.5	rhomboid family intramembrane serine protease
MMJJ_RS01380		+0.2	1.1	DUF1890 domain-containing protein
MMJJ_RS08285		+0.2	1.3	class I SAM-dependent methyltransferase
MMJJ_RS07010		+0.2	0.9	preprotein translocase subunit Sec61beta
MMJJ_RS07255		+0.2	1.6	hypothetical protein
MMJJ_RS04510		+0.2	1.5	hypothetical protein
MMJJ_RS07260		+0.2	1.2	PspC domain-containing protein
MMJJ_RS00155		+0.2	1.5	DUF2193 domain-containing protein
MMJJ_RS09005		+0.2	1.5	N-6 DNA methylase
MMJJ_RS06105		+0.2	1.3	DUF99 family protein
MMJJ_RS06280		+0.2	1.4	hypothetical protein
MMJJ_RS08705		+0.2	1.2	AEC family transporter
MMJJ_RS06550		+0.2	1.3	ABC transporter permease
MMJJ_RS00715		+0.2	1.2	DUF1847 domain-containing protein
MMJJ_RS04120		+0.2	1.3	amino acid ABC transporter ATP-binding protein
MMJJ_RS07865		+0.2	1.0	zinc ribbon domain-containing protein
MMJJ_RS03290		+0.2	1.4	amidohydrolase
MMJJ_RS07855		+0.2	1.2	YkgJ family cysteine cluster protein
MMJJ_RS03220		+0.2	1.4	inosine/xanthosine triphosphatase
MMJJ_RS00090		+0.2	1.2	4Fe-4S binding protein
MMJJ_RS04245		+0.2	1.0	flavoprotein
MMJJ_RS05750		+0.2	1.4	flagellar accessory protein FlaH
MMJJ_RS02265		+0.2	1.2	hypothetical protein
MMJJ_RS08045		+0.2	1.4	transporter substrate-binding domain-containing protein
MMJJ_RS04580		+0.2	1.3	2-phosphosulfolactate phosphatase
MMJJ_RS01835		+0.2	1.3	tRNA pseudouridine(13) synthase TruD
MMJJ_RS07440		+0.2	1.3	metallophosphoesterase
MMJJ_RS07910		+0.2	1.2	CBS domain-containing protein
MMJJ_RS09065		+0.2	1.0	hypothetical protein
MMJJ_RS00790		+0.2	1.0	ribonuclease H family protein
MMJJ_RS03040		+0.2	1.0	lactate utilization protein
MMJJ_RS02340		+0.2	1.1	SAM-dependent methyltransferase
MMJJ_RS05890		+0.2	1.2	molybdate ABC transporter substrate-binding protein
MMJJ_RS06080		+0.2	1.1	serine/threonine protein kinase
MMJJ_RS01955		+0.2	1.3	hypothetical protein
MMJJ_RS06285		+0.2	1.0	YchF/TatD family DNA exonuclease
MMJJ_RS04815		+0.2	0.6	TIM barrel protein
MMJJ_RS07695		+0.2	1.3	glycoside hydrolase family 15 protein
MMJJ_RS04625		+0.2	1.2	SLC13 family permease
MMJJ_RS06520		+0.2	1.1	TldD/PmbA family protein
MMJJ_RS06115		+0.2	1.1	pyruvate kinase
MMJJ_RS04825		+0.1	1.3	2,3-bisphosphoglycerate-independent phosphoglycerate mutase
MMJJ_RS04585		+0.1	1.0	phenylacetate--CoA ligase
MMJJ_RS06640		+0.1	1.0	YfcE family phosphodiesterase
MMJJ_RS06120		+0.1	1.1	DUF4013 domain-containing protein
MMJJ_RS04135		+0.1	0.6	7-cyano-7-deazaguanine synthase QueC
MMJJ_RS02280		+0.1	1.1	sulfate permease
MMJJ_RS02965		+0.1	0.9	RimK-like ATPgrasp N-terminal domain-containing protein
MMJJ_RS09145		+0.1	0.9	exodeoxyribonuclease III
MMJJ_RS08370		+0.1	0.6	hypothetical protein

Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments