Experiment set3IT038 for Sinorhizobium meliloti 1021

Compare to:

LB with Paraquat dichloride 0.2 mg/ml

200 most important genes:

  gene name fitness t score description  
SMc00876 -4.9 -6.3 ATP-binding MRP protein compare
SMc02140 -4.4 -1.6 phosphate regulon transcriptional regulatory protein compare
SMc02363 -4.3 -3.0 cytochrome C-type biogenesis transmembrane protein compare
SMc02909 -4.3 -2.6 transglycosylase transmembrane protein compare
SMc03849 -4.0 -1.7 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc00073 -4.0 -3.1 hypothetical protein compare
SMc01217 -4.0 -8.2 transport transmembrane protein conserved
SMc02149 -3.9 -2.0 hypothetical protein compare
SMa1095 -3.7 -0.9 hypothetical protein compare
SMc03978 -3.7 -5.0 transketolase compare
SMc01850 -3.7 -4.3 hypothetical protein compare
SMc02147 -3.5 -8.4 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc01880 -3.5 -3.7 pantoate--beta-alanine ligase compare
SMc00726 -3.5 -1.2 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc02142 -3.4 -6.8 phosphate transporter ATP-binding protein compare
SMc02833 -3.4 -2.8 penicillin-insensitive murein endopeptidase compare
SMc01845 -3.4 -2.3 transglycosylase transmembrane protein compare
SMc01147 -3.3 -4.4 coproporphyrinogen III oxidase compare
SMc00963 -3.2 -3.5 hypothetical protein compare
SMc03242 -3.1 -3.1 GTP-binding protein compare
SMc02144 -3.1 -5.5 phosphate ABC transporter permease compare
SMc00914 -3.1 -3.6 oxidoreductase compare
SMc02510 -3.0 -1.1 ferric uptake regulation protein compare
SM_b20953 -3.0 -1.3 hypothetical protein compare
SMc02753 -2.9 -2.0 PTS system transporter subunit IIA compare
SMc03763 -2.9 -4.8 cytosine-specific methyltransferase compare
SMc02435 -2.8 -4.0 methyltransferase compare
SMc02778 -2.8 -1.0 hydroxyacid aldolase compare
SMc03850 -2.7 -1.3 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02850 -2.5 -3.4 DNA polymerase I compare
SMc02143 -2.5 -4.1 phosphate ABC transporter permease compare
SMc00619 -2.5 -2.3 hypothetical protein compare
SM_b20021 -2.4 -1.2 transcriptional regulator compare
SMc01337 -2.4 -1.6 hypothetical protein compare
SMc04296 -2.3 -1.1 cell division protein FtsZ compare
SM_b21096 -2.3 -1.1 amino acid transporter ABC transporter ATP-binding protein compare
SMc02856 -2.2 -9.7 penicillin-binding protein compare
SMc01183 -2.2 -1.5 LexA repressor compare
SMc01360 -2.2 -2.2 aspartate carbamoyltransferase catalytic subunit compare
SMc04330 -2.2 -2.7 trimethylamine methyltransferase compare
SMc00295 -2.2 -1.7 hypothetical protein compare
SMc01881 -2.2 -2.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02362 -2.1 -2.6 cytochrome c-type biogenesis protein CcmE compare
SMc01361 -2.1 -3.4 dihydroorotase compare
SMc00987 -2.1 -2.4 hypothetical protein compare
SMc00334 -2.1 -1.3 cytidylate kinase compare
SMc00067 -2.0 -8.1 outer-membranne lipoprotein compare
SMc02505 -2.0 -1.6 hypothetical protein compare
SMc00352 -2.0 -1.9 acetyltransferase compare
SMa0789 -2.0 -3.6 GntR family transcriptional regulator compare
SMc03184 -2.0 -0.9 PH adaptation potassium efflux system G transmembrane protein compare
SMc02102 -2.0 -4.7 hypothetical protein compare
SMc02114 -2.0 -2.6 hypothetical protein compare
SMa2281 -2.0 -2.8 hypothetical protein compare
SMc01568 -1.9 -1.6 hypothetical protein compare
SMc00580 -1.9 -3.7 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc01280 -1.9 -2.0 protease compare
SMc01438 -1.8 -4.4 protease precursor signal peptide protein compare
SMc04085 -1.8 -4.6 hypothetical protein compare
SMc02145 -1.8 -1.0 signal peptide protein compare
SMc02641 -1.8 -3.0 UDP-glucose 6-dehydrogenase compare
SM_b20258 -1.8 -3.6 transcriptional regulator compare
SMc01342 -1.8 -4.5 hypothetical protein compare
SM_b21551 -1.8 -1.0 hypothetical protein compare
SMc00024 -1.6 -4.2 chromosome partition protein compare
SMc02683 -1.6 -1.9 hypothetical protein compare
SMc00821 -1.6 -1.2 hypothetical protein compare
SMc02484 -1.5 -3.1 amino acid efflux transmembrane protein compare
SMc02868 -1.5 -4.3 multidrug efflux system protein compare
SMc00088 -1.5 -1.4 hypothetical protein compare
SMc01461 -1.4 -4.3 DNA helicase II protein compare
SMa1118 -1.4 -1.5 HspC2 heat shock protein compare
SMc02724 -1.4 -2.1 hypothetical protein compare
SMc04024 -1.4 -4.1 membrane-bound lytic murein transglycosylase compare
SMc00451 -1.4 -3.6 processing protease compare
SMc03127 -1.4 -0.9 ABC transporter permease compare
SMc01187 -1.4 -2.2 rare lipoprotein A compare
SMc01144 -1.4 -3.5 ribonuclease PH compare
SMc03093 -1.4 -1.7 hypothetical protein compare
SM_b21524 -1.4 -1.7 septum formation inhibitor compare
SMa0431 -1.3 -1.1 hypothetical protein compare
SMc02697 -1.3 -1.1 hypothetical protein compare
SMc00981 -1.3 -4.6 ferredoxin protein compare
SMc00579 -1.3 -2.8 dimethyladenosine transferase compare
SMc00461 -1.3 -1.0 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMa2168 -1.3 -1.2 tRNA-Met compare
SMc02582 -1.2 -2.8 hypothetical protein compare
SMc01153 -1.2 -0.9 enoyl-CoA hydratase compare
SMc03967 -1.2 -0.9 Holliday junction resolvase compare
SMa0112 -1.2 -2.8 hypothetical protein compare
SM_b20452 -1.2 -3.0 hypothetical protein compare
SMc00296 -1.2 -6.2 POLY3-hydroxybutyrate polymerase compare
SMc01929 -1.2 -1.9 hypothetical protein compare
SMa1894 -1.2 -1.8 methionine sulfoxide reductase B compare
SMc02306 -1.2 -1.1 hypothetical protein compare
SMc02266 -1.2 -1.3 hypothetical protein compare
SMc02865 -1.2 -2.7 acetyltransferase compare
SMc05020 -1.2 -1.5 entericidin A precursor compare
SMc02867 -1.2 -2.8 multidrug-efflux system transmembrane protein compare
SMc01501 -1.2 -1.9 mannitol 2-dehydrogenase compare
SMc00555 -1.2 -0.9 colicin V production transmembrane protein compare
SMc02451 -1.2 -1.2 hypothetical protein compare
SMc03159 -1.2 -1.8 ABC transporter ATP-binding protein compare
SMc04121 -1.2 -1.5 uracil phosphoribosyltransferase compare
SMa1002 -1.2 -0.8 hypothetical protein compare
SMc00302 -1.2 -1.5 hypothetical protein compare
SMc01215 -1.1 -3.1 carbamoyl phosphate synthase large subunit compare
SM_b20450 -1.1 -6.7 regulatory protein compare
SMc01034 -1.1 -1.3 hypothetical protein compare
SMc02495 -1.1 -0.8 translaldolase compare
SMa0838 -1.1 -1.5 SyrA protein involved in EPS production compare
SM_b20758 -1.1 -1.8 ArsR family transcriptional regulator compare
SMc02338 -1.1 -1.6 periplasmic binding ABC transporter protein compare
SMc00941 -1.1 -1.3 hypothetical protein compare
SMc03800 -1.1 -1.7 hypothetical protein compare
SM_b20728 -1.1 -1.9 hypothetical protein compare
SMc00017 -1.1 -1.3 homoserine kinase compare
SM_b20226 -1.1 -1.1 hypothetical protein compare
SMc01831 -1.1 -2.3 urease accessory protein compare
SM_b20822 -1.1 -3.5 cell surface polysaccharide export ABC-2 transporter permease, close relative to wzm1Y20833 compare
SMc03229 -1.1 -1.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc01258 -1.1 -4.6 hypothetical protein compare
SMc03179 -1.1 -6.1 monovalent cation/H+ antiporter subunit A compare
SMc00760 -1.1 -3.1 recombinase A compare
SM_b20547 -1.0 -1.7 hypothetical protein compare
SMc00347 -1.0 -1.4 nucleoside diphosphate kinase regulator compare
SMc00854 -1.0 -1.0 hypothetical protein compare
SMc01579 -1.0 -0.8 hypothetical protein compare
SMc04052 -1.0 -0.9 transcriptional regulator compare
SMc01015 -1.0 -2.2 hypothetical protein compare
SMc02812 -1.0 -1.8 hypothetical protein compare
SMa0265 -1.0 -1.6 dehydrogenase compare
SMc02718 -1.0 -1.2 hypothetical protein compare
SMc00982 -1.0 -3.5 dioxygenase compare
SM_b20992 -1.0 -2.2 hypothetical protein compare
SMc00970 -1.0 -1.7 exodeoxyribonuclease VII small subunit compare
SMc03091 -1.0 -3.1 arginase compare
SMc02860 -1.0 -1.5 hypothetical protein compare
SMc01458 -1.0 -3.1 transporter compare
SM_b21120 -1.0 -1.7 hypothetical protein compare
SMa0887 -1.0 -1.6 hypothetical protein compare
SMc03100 -1.0 -1.0 hypothetical protein compare
SMc02232 -1.0 -1.2 hypothetical protein compare
SMc02758 -1.0 -1.8 nucleotidyl transferase compare
SM_b20022 -1.0 -2.1 hypothetical protein compare
SMc00928 -0.9 -0.5 signal peptide protein compare
SMc00459 -0.9 -1.7 hypothetical protein compare
SMc01204 -0.9 -4.5 transmembrane oxidoreductase compare
SMc01853 -0.9 -1.6 hypothetical protein compare
SMc00466 -0.9 -2.1 hypothetical protein compare
SMc03876 -0.9 -1.8 HEAT shock-like protein compare
SM_b21479 -0.9 -1.3 hypothetical protein compare
SMc02234 -0.9 -1.8 hypothetical protein compare
SMc00053 -0.9 -0.5 monovalent cation/H+ antiporter subunit C compare
SMa0249 -0.9 -1.1 TRAP-type small permease component compare
SMa0082 -0.9 -1.9 ABC transporter substrate-binding protein compare
SMc00650 -0.9 -0.7 hypothetical protein compare
SMc02425 -0.9 -1.4 transcriptional regulator compare
SMc00030 -0.9 -1.1 hypothetical protein compare
SMc03120 -0.9 -1.6 ABC transporter ATP-binding protein compare
SM_b20784 -0.9 -3.3 branched-chain amino acid ABC transporter ATP-binding protein compare
SMa1201 -0.9 -1.2 hypothetical protein compare
SM_b20876 -0.9 -2.2 hypothetical protein compare
SMc03180 -0.9 -3.8 monovalent cation/H+ antiporter subunit C compare
SMc02979 -0.9 -3.0 hypothetical protein compare
SM_b20746 -0.9 -0.5 hypothetical protein compare
SMc03140 -0.9 -2.7 transcriptional regulator compare
SMc01770 -0.9 -1.1 serine hydroxymethyltransferase compare
SMc00691 -0.9 -1.5 site-specific tyrosine recombinase XerD compare
SMc01700 -0.8 -3.1 peptidyl-prolyl cis-trans isomerase A compare
SMc02046 -0.8 -0.7 hypothetical protein compare
SMc01569 -0.8 -1.0 carbamoyl phosphate synthase small subunit compare
SMc02906 -0.8 -0.6 hypothetical protein compare
SMc01368 -0.8 -2.5 transport transmembrane protein compare
SM_b21174 -0.8 -1.9 phosphate uptake ABC transporter permease compare
SMc04242 -0.8 -1.3 zinc uptake regulation protein compare
SMa1400 -0.8 -1.6 acyl-CoA dehydrogenase compare
SMa2299 -0.8 -1.2 hypothetical protein compare
SM_b21108 -0.8 -2.7 L-fucose mutarotase (EC 5.1.3.29) (from data) compare
SMc00557 -0.8 -2.9 alanine racemase compare
SMa2011 -0.8 -1.6 hypothetical protein compare
SMc00378 -0.8 -2.1 exodeoxyribonuclease VII large subunit compare
SMc04432 -0.8 -1.7 hypothetical protein compare
SMc01969 -0.8 -3.7 hypothetical protein compare
SMa0169 -0.8 -2.1 methyltransferase compare
SMc04231 -0.8 -3.8 excinuclease ABC subunit B compare
SMc01428 -0.8 -1.1 cold shock transcription regulator protein compare
SMc04008 -0.8 -0.9 hypothetical protein compare
SMc00856 -0.8 -0.6 hypothetical protein compare
SMc01260 -0.8 -2.2 transcriptional regulator compare
SMa1998 -0.8 -2.6 ABC transporter ATP-binding protein compare
SM_b20909 -0.8 -1.2 hypothetical protein compare
SMc00602 -0.8 -3.0 excinuclease ABC subunit C compare
SM_b20387 -0.8 -0.8 transcriptional regulator compare
SMc03181 -0.8 -3.7 monovalent cation/H+ antiporter subunit D compare
SMc01220 -0.8 -2.0 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02041 -0.8 -1.8 short chain dehydrogenase compare
SMa0537 -0.8 -3.7 hypothetical protein compare
SMc03834 -0.8 -0.8 pterin-4-alpha-carbinolamine dehydratase compare
SMc02260 -0.8 -1.3 ABC transporter ATP-binding protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Paraquat dichloride in Sinorhizobium meliloti 1021

For stress Paraquat dichloride across organisms