Experiment set3IT038 for Methanococcus maripaludis JJ

Compare to:

formate McAA folic acid dropout

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.1 10.4 hypothetical protein compare
MMJJ_RS03725 +1.0 2.7 sulfurtransferase TusA family protein compare
MMJJ_RS04005 +0.9 6.1 acetate--CoA ligase family protein compare
MMJJ_RS08830 +0.8 3.2 hypothetical protein compare
MMJJ_RS04545 +0.7 3.3 PadR family transcriptional regulator compare
MMJJ_RS03835 +0.7 3.3 DUF504 domain-containing protein compare
MMJJ_RS07235 +0.6 5.2 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS07240 +0.6 5.3 MBL fold metallo-hydrolase compare
MMJJ_RS07225 +0.6 4.0 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS08935 +0.6 0.9 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS06680 +0.6 3.6 DUF366 family protein compare
MMJJ_RS05685 +0.6 3.4 class III signal peptide-containing protein compare
MMJJ_RS05280 +0.6 0.8 hypothetical protein compare
MMJJ_RS06505 +0.6 2.7 prephenate dehydratase compare
MMJJ_RS07220 +0.6 4.2 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS06275 +0.5 2.3 hypothetical protein compare
MMJJ_RS07025 +0.5 3.1 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS07185 +0.5 2.3 DUF371 domain-containing protein compare
MMJJ_RS03805 +0.5 1.5 hypothetical protein compare
MMJJ_RS06500 +0.5 3.6 class I SAM-dependent methyltransferase compare
MMJJ_RS04955 +0.5 3.1 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS06460 +0.5 3.2 cytochrome c compare
MMJJ_RS05040 +0.5 3.3 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS01855 +0.5 3.5 MBL fold metallo-hydrolase compare
MMJJ_RS06675 +0.5 3.7 TIGR01212 family radical SAM protein compare
MMJJ_RS06770 +0.5 3.9 hypothetical protein compare
MMJJ_RS07680 +0.4 2.9 glucose-6-phosphate isomerase compare
MMJJ_RS07920 +0.4 3.2 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS05975 +0.4 3.1 sulfurtransferase TusA family protein compare
MMJJ_RS07230 +0.4 2.9 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS06640 +0.4 3.0 YfcE family phosphodiesterase compare
MMJJ_RS06190 +0.4 3.1 7-cyano-7-deazaguanine synthase compare
MMJJ_RS03605 +0.4 2.2 TIGR00297 family protein compare
MMJJ_RS06585 +0.4 2.9 alanine racemase compare
MMJJ_RS04105 +0.4 3.3 prepilin peptidase compare
MMJJ_RS06735 +0.4 2.7 cobalt ECF transporter T component CbiQ compare
MMJJ_RS02270 +0.4 1.5 HEPN domain-containing protein compare
MMJJ_RS06440 +0.4 2.5 DUF4870 domain-containing protein compare
MMJJ_RS01670 +0.4 1.9 hypothetical protein compare
MMJJ_RS00500 +0.4 1.9 GNAT family N-acetyltransferase compare
MMJJ_RS06950 +0.4 2.7 4-demethylwyosine synthase TYW1 compare
MMJJ_RS07795 +0.4 2.1 cupin domain-containing protein compare
MMJJ_RS06535 +0.4 3.1 UPF0104 family protein compare
MMJJ_RS09300 +0.4 1.2 hypothetical protein compare
MMJJ_RS06800 +0.4 2.0 prefoldin subunit alpha compare
MMJJ_RS05525 +0.4 2.2 GTP-binding protein compare
MMJJ_RS03395 +0.4 1.3 hypothetical protein compare
MMJJ_RS06765 +0.4 3.1 hypothetical protein compare
MMJJ_RS06685 +0.4 3.2 S-layer protein compare
MMJJ_RS06740 +0.4 1.9 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS05700 +0.4 2.4 metallophosphoesterase compare
MMJJ_RS08100 +0.3 2.1 hypothetical protein compare
MMJJ_RS06090 +0.3 2.3 hypothetical protein compare
MMJJ_RS07010 +0.3 2.2 preprotein translocase subunit Sec61beta compare
MMJJ_RS07210 +0.3 2.6 AmmeMemoRadiSam system protein B compare
MMJJ_RS08455 +0.3 1.5 tetratricopeptide repeat protein compare
MMJJ_RS07260 +0.3 2.3 PspC domain-containing protein compare
MMJJ_RS06210 +0.3 1.8 hypothetical protein compare
MMJJ_RS01010 +0.3 3.1 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS07215 +0.3 2.7 TIGR00341 family protein compare
MMJJ_RS06810 +0.3 2.5 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS00150 +0.3 2.0 DUF2180 family protein compare
MMJJ_RS06960 +0.3 2.9 CAP domain-containing protein compare
MMJJ_RS07935 +0.3 0.3 protein fwdD compare
MMJJ_RS06515 +0.3 2.4 ribonuclease III compare
MMJJ_RS03410 +0.3 1.6 hypothetical protein compare
MMJJ_RS07825 +0.3 1.7 YciI family protein compare
MMJJ_RS06120 +0.3 2.2 DUF4013 domain-containing protein compare
MMJJ_RS06085 +0.3 1.4 proteasome assembly chaperone family protein compare
MMJJ_RS07765 +0.3 1.5 DMT family protein compare
MMJJ_RS08160 +0.3 1.9 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMJJ_RS07480 +0.3 2.3 FAD-dependent oxidoreductase compare
MMJJ_RS08390 +0.3 1.0 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS07800 +0.3 2.3 AMP-binding protein compare
MMJJ_RS07835 +0.3 2.2 UPF0489 family protein compare
MMJJ_RS08525 +0.3 1.5 peptidylprolyl isomerase compare
MMJJ_RS08515 +0.3 1.1 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS03285 +0.3 1.7 gamma-glutamylcyclotransferase compare
MMJJ_RS07915 +0.3 1.6 CBS domain-containing protein compare
MMJJ_RS05915 +0.3 1.2 multiprotein bridging factor aMBF1 compare
MMJJ_RS06580 +0.3 2.1 alanine dehydrogenase compare
MMJJ_RS01955 +0.3 2.4 hypothetical protein compare
MMJJ_RS06385 +0.3 1.3 hypothetical protein compare
MMJJ_RS06495 +0.3 0.6 hypothetical protein compare
MMJJ_RS01825 +0.3 1.7 DNA repair and recombination protein RadB compare
MMJJ_RS04350 +0.3 1.3 hypothetical protein compare
MMJJ_RS07905 +0.3 1.9 DUF89 domain-containing protein compare
MMJJ_RS07815 +0.3 1.9 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS05355 +0.3 1.7 DUF2121 domain-containing protein compare
MMJJ_RS05980 +0.3 1.9 DUF5400 domain-containing protein compare
MMJJ_RS05115 +0.3 1.1 P-II family nitrogen regulator compare
MMJJ_RS06455 +0.3 2.0 YeeE/YedE family protein compare
MMJJ_RS03575 +0.3 1.2 NUDIX hydrolase compare
MMJJ_RS06710 +0.3 2.2 TldD/PmbA family protein compare
MMJJ_RS07820 +0.3 1.9 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS06205 +0.2 1.8 EamA family transporter compare
MMJJ_RS06550 +0.2 1.9 ABC transporter permease compare
MMJJ_RS07200 +0.2 2.0 MFS transporter compare
MMJJ_RS05405 +0.2 1.9 DNA cytosine methyltransferase compare
MMJJ_RS05520 +0.2 1.9 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMJJ_RS09360 +0.2 1.7 hypothetical protein compare
MMJJ_RS06745 +0.2 1.4 energy-coupling factor ABC transporter permease compare
MMJJ_RS07595 +0.2 1.3 hypothetical protein compare
MMJJ_RS01745 +0.2 1.1 metal-dependent transcriptional regulator compare
MMJJ_RS09295 +0.2 0.3 hypothetical protein compare
MMJJ_RS05200 +0.2 1.9 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS06790 +0.2 1.9 nucleotidyltransferase family protein compare
MMJJ_RS02230 +0.2 1.9 hypothetical protein compare
MMJJ_RS08305 +0.2 1.4 peroxiredoxin compare
MMJJ_RS07270 +0.2 1.6 ribonuclease HII compare
MMJJ_RS04830 +0.2 1.5 zinc dependent phospholipase C family protein compare
MMJJ_RS04215 +0.2 1.9 DMT family transporter compare
MMJJ_RS00745 +0.2 1.0 hypothetical protein compare
MMJJ_RS06285 +0.2 1.3 YchF/TatD family DNA exonuclease compare
MMJJ_RS05970 +0.2 0.7 MJ0307 family thioredoxin compare
MMJJ_RS07810 +0.2 1.5 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS09325 +0.2 1.2 hypothetical protein compare
MMJJ_RS03850 +0.2 1.0 nucleoside-diphosphate kinase compare
MMJJ_RS03905 +0.2 1.5 ATP-binding cassette domain-containing protein compare
MMJJ_RS06280 +0.2 1.7 hypothetical protein compare
MMJJ_RS08880 +0.2 1.3 IMPACT family protein compare
MMJJ_RS01845 +0.2 1.7 acetolactate decarboxylase compare
MMJJ_RS06445 +0.2 1.9 hypothetical protein compare
MMJJ_RS09365 +0.2 0.6 hypothetical protein compare
MMJJ_RS07685 +0.2 1.8 glycogen/starch synthase compare
MMJJ_RS00730 +0.2 1.3 peptide-methionine (S)-S-oxide reductase MsrA compare
MMJJ_RS09230 +0.2 1.1 hypothetical protein compare
MMJJ_RS01790 +0.2 1.5 pyridoxamine 5'-phosphate oxidase family protein compare
MMJJ_RS01095 +0.2 1.6 site-specific integrase compare
MMJJ_RS09065 +0.2 1.3 hypothetical protein compare
MMJJ_RS05335 +0.2 1.3 heavy metal-binding domain-containing protein compare
MMJJ_RS04390 +0.2 1.7 rhomboid family intramembrane serine protease compare
MMJJ_RS06470 +0.2 1.5 tripartite tricarboxylate transporter permease compare
MMJJ_RS07445 +0.2 1.5 RlmF-related methyltransferase compare
MMJJ_RS05690 +0.2 1.9 hypothetical protein compare
MMJJ_RS07175 +0.2 1.6 DEAD/DEAH box helicase compare
MMJJ_RS09205 +0.2 0.9 hypothetical protein compare
MMJJ_RS06450 +0.2 1.5 DUF3343 domain-containing protein compare
MMJJ_RS03040 +0.2 1.4 lactate utilization protein compare
MMJJ_RS01970 +0.2 1.0 hypothetical protein compare
MMJJ_RS06540 +0.2 0.8 DUF2120 domain-containing protein compare
MMJJ_RS05715 +0.2 1.4 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS07985 +0.2 0.9 hypothetical protein compare
MMJJ_RS02340 +0.2 1.0 SAM-dependent methyltransferase compare
MMJJ_RS06430 +0.2 1.2 haloacid dehalogenase compare
MMJJ_RS07385 +0.2 1.4 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS05960 +0.2 1.3 DUF169 domain-containing protein compare
MMJJ_RS00145 +0.2 1.4 aquaporin family protein compare
MMJJ_RS05500 +0.2 1.6 hypothetical protein compare
MMJJ_RS03370 +0.2 0.9 hypothetical protein compare
MMJJ_RS07495 +0.2 1.1 4Fe-4S binding protein compare
MMJJ_RS05990 +0.2 1.2 phosphatase PAP2 family protein compare
MMJJ_RS02155 +0.2 1.3 DMT family transporter compare
MMJJ_RS03735 +0.2 1.3 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS07695 +0.2 1.5 glycoside hydrolase family 15 protein compare
MMJJ_RS05350 +0.2 0.9 DUF192 domain-containing protein compare
MMJJ_RS05410 +0.2 1.1 RecB-family nuclease compare
MMJJ_RS08350 +0.2 1.5 heavy metal translocating P-type ATPase compare
MMJJ_RS04825 +0.2 1.4 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MMJJ_RS05605 +0.2 1.0 hypothetical protein compare
MMJJ_RS05340 +0.2 1.4 AAA family ATPase compare
MMJJ_RS03375 +0.2 0.7 hypothetical protein compare
MMJJ_RS09005 +0.2 1.5 N-6 DNA methylase compare
MMJJ_RS02665 +0.2 0.6 methyl-accepting chemotaxis protein compare
MMJJ_RS01385 +0.2 1.3 PadR family transcriptional regulator compare
MMJJ_RS02290 +0.2 1.2 MarR family transcriptional regulator compare
MMJJ_RS06665 +0.2 0.8 DUF3236 domain-containing protein compare
MMJJ_RS06100 +0.2 1.2 rubrerythrin compare
MMJJ_RS07005 +0.2 0.7 transcription factor S compare
MMJJ_RS06590 +0.2 1.3 sodium:alanine symporter family protein compare
MMJJ_RS06520 +0.2 1.3 TldD/PmbA family protein compare
MMJJ_RS09405 +0.2 0.4 hypothetical protein compare
MMJJ_RS07280 +0.2 0.9 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS07830 +0.2 1.1 DUF1786 domain-containing protein compare
MMJJ_RS04300 +0.2 1.1 hypothetical protein compare
MMJJ_RS06235 +0.2 1.3 IGHMBP2 family helicase compare
MMJJ_RS04850 +0.2 1.0 energy-coupling factor transporter transmembrane protein EcfT compare
MMJJ_RS07855 +0.2 1.1 YkgJ family cysteine cluster protein compare
MMJJ_RS05885 +0.2 1.4 tungstate ABC transporter substrate-binding protein WtpA compare
MMJJ_RS07450 +0.2 0.8 hypothetical protein compare
MMJJ_RS07910 +0.2 1.0 CBS domain-containing protein compare
MMJJ_RS01785 +0.2 0.3 50S ribosomal protein L14e compare
MMJJ_RS00155 +0.2 1.3 DUF2193 domain-containing protein compare
MMJJ_RS00845 +0.2 1.0 hypothetical protein compare
MMJJ_RS08485 +0.1 0.7 Lrp/AsnC family transcriptional regulator compare
MMJJ_RS07890 +0.1 0.9 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS09145 +0.1 0.9 exodeoxyribonuclease III compare
MMJJ_RS01320 +0.1 1.2 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMJJ_RS09380 +0.1 0.5 hypothetical protein compare
MMJJ_RS02160 +0.1 0.9 amino acid ABC transporter permease compare
MMJJ_RS00815 +0.1 1.2 ASKHA domain-containing protein compare
MMJJ_RS07255 +0.1 1.2 hypothetical protein compare
MMJJ_RS02240 +0.1 0.7 CGGC domain-containing protein compare
MMJJ_RS01300 +0.1 1.0 MarR family transcriptional regulator compare
MMJJ_RS00400 +0.1 0.4 tautomerase family protein compare
MMJJ_RS00705 +0.1 1.0 nitrogenase iron protein compare
MMJJ_RS04500 +0.1 1.0 hypothetical protein compare
MMJJ_RS04340 +0.1 0.4 hypothetical protein compare
MMJJ_RS05585 +0.1 0.9 hypothetical protein compare
MMJJ_RS05390 +0.1 1.1 tRNA pseudouridine(13) synthase TruD compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments