Experiment set3IT037 for Sinorhizobium meliloti 1021

Compare to:

LB with copper (II) chloride dihydrate 1 mM

200 most important genes:

  gene name fitness t score description  
SMc02753 -4.8 -1.3 PTS system transporter subunit IIA compare
SM_b20021 -4.8 -0.9 transcriptional regulator compare
SMc00726 -4.7 -0.9 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc02147 -4.5 -8.1 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc01850 -4.5 -2.2 hypothetical protein compare
SMc02140 -4.5 -1.2 phosphate regulon transcriptional regulatory protein compare
SMc00492 -4.4 -0.8 hypothetical protein compare
SM_b21173 -4.4 -1.4 hypothetical protein compare
SMc00800 -4.3 -1.2 hypothetical protein compare
SMc01800 -4.3 -1.2 cytochrome C oxidase assembly transmembrane protein compare
SMa0789 -4.3 -3.6 GntR family transcriptional regulator compare
SMc00017 -4.2 -1.1 homoserine kinase compare
SMc01183 -4.0 -1.1 LexA repressor compare
SMc03849 -4.0 -1.3 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc01880 -3.8 -2.1 pantoate--beta-alanine ligase compare
SMc00712 -3.7 -1.2 hypothetical protein compare
SMc03127 -3.6 -1.9 ABC transporter permease compare
SMc01770 -3.5 -1.6 serine hydroxymethyltransferase compare
SMc02149 -3.5 -1.6 hypothetical protein compare
SM_b20105 -3.4 -1.6 transcriptional regulator compare
SMc01568 -3.4 -0.9 hypothetical protein compare
SMc00404 -3.4 -0.9 hypothetical protein compare
SMc02246 -3.3 -0.6 hypothetical protein compare
SMc01280 -3.2 -2.0 protease compare
SMc02362 -3.1 -2.8 cytochrome c-type biogenesis protein CcmE compare
SMc02850 -3.1 -2.8 DNA polymerase I compare
SM_b21489 -3.1 -2.4 cytochrome O ubiquinol oxidase subunit III compare
SMc01553 -3.0 -1.3 acyl carrier protein compare
SMc02510 -3.0 -0.8 ferric uptake regulation protein compare
SMc04230 -2.9 -3.4 transmembrane signal peptide protein compare
SMc02144 -2.8 -5.2 phosphate ABC transporter permease compare
SMa1625 -2.8 -1.9 LysR family transcriptional regulator compare
SM_b21096 -2.8 -0.9 amino acid transporter ABC transporter ATP-binding protein compare
SMc02778 -2.7 -0.7 hydroxyacid aldolase compare
SMc02363 -2.5 -3.7 cytochrome C-type biogenesis transmembrane protein compare
SMc03763 -2.5 -2.7 cytosine-specific methyltransferase compare
SMc00419 -2.5 -5.1 glutathione synthetase compare
SMc02858 -2.5 -0.5 chaperone protein DnaJ compare
SMc00010 -2.4 -1.6 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc01315 -2.4 -1.3 hypothetical protein compare
SMa1118 -2.4 -1.6 HspC2 heat shock protein compare
SMc00470 -2.3 -2.1 hypothetical protein compare
SMc02989 -2.3 -2.0 hypothetical protein compare
SMa0748 -2.3 -1.9 MucR family transcriptional regulator compare
SMc00302 -2.3 -2.2 hypothetical protein compare
SMa0753 -2.3 -0.7 hypothetical protein compare
SMc02570 -2.2 -4.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SM_b21633 -2.2 -0.8 enoyl-CoA hydratase compare
SMc02572 -2.2 -2.9 imidazole glycerol phosphate synthase subunit HisH compare
SMc02307 -2.2 -4.8 histidinol dehydrogenase compare
SMc01595 -2.2 -2.3 sensor histidine kinase transmembrane protein compare
SMc01508 -2.1 -1.9 hypothetical protein compare
SMc02145 -2.1 -0.8 signal peptide protein compare
SMc03973 -2.1 -5.9 hypothetical protein compare
SMc02142 -2.1 -3.2 phosphate transporter ATP-binding protein compare
SMc02280 -2.1 -1.2 hypothetical protein compare
SMc02787 -2.1 -1.8 hypothetical protein compare
SM_b20758 -2.0 -1.4 ArsR family transcriptional regulator compare
SMc01360 -2.0 -3.0 aspartate carbamoyltransferase catalytic subunit compare
SM_b21347 -2.0 -1.2 pectin degradation protein compare
SMc02868 -2.0 -2.6 multidrug efflux system protein compare
SMc00329 -2.0 -1.7 iron response regulator protein compare
SMa1365 -1.9 -1.1 ATP-binding protein compare
SMc02495 -1.9 -0.8 translaldolase compare
SMa0286 -1.9 -1.7 hypothetical protein compare
SMc01147 -1.9 -2.0 coproporphyrinogen III oxidase compare
SMc03746 -1.9 -1.6 hypothetical protein compare
SMc03978 -1.8 -2.0 transketolase compare
SMc02085 -1.8 -3.7 biopolymer transport transmembrane protein compare
SMc02114 -1.8 -2.0 hypothetical protein compare
SMc04174 -1.8 -1.0 signal peptide protein compare
SMc02856 -1.8 -6.1 penicillin-binding protein compare
SMc02543 -1.8 -3.8 hypothetical protein compare
SMc00108 -1.8 -2.2 acetyltransferase compare
SMc02897 -1.8 -2.0 cytochrome C transmembrane protein compare
SMa0333 -1.7 -2.0 hypothetical protein compare
SM_b20412 -1.7 -2.5 hypothetical protein compare
SMc00450 -1.7 -1.6 protoheme IX farnesyltransferase compare
SMc01012 -1.7 -1.1 hypothetical protein compare
SMc01206 -1.7 -1.2 queuine tRNA-ribosyltransferase compare
SMc01845 -1.7 -1.2 transglycosylase transmembrane protein compare
SMc03120 -1.7 -1.3 ABC transporter ATP-binding protein compare
SMa2343 -1.7 -2.6 oxidoreductase compare
SMc02266 -1.7 -1.2 hypothetical protein compare
SMa0964 -1.7 -2.2 hypothetical protein compare
SMc00917 -1.6 -1.9 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02550 -1.6 -1.7 hypothetical protein compare
SM_b20563 -1.6 -2.0 hypothetical protein compare
SMc00725 -1.6 -2.5 argininosuccinate lyase compare
SMa1570 -1.6 -1.1 PilA2 pilus assembly protein compare
SMc00987 -1.6 -1.7 hypothetical protein compare
SMc02141 -1.6 -2.6 phosphate transporter PhoU compare
SMc00689 -1.6 -3.0 lipoprotein compare
SMc00166 -1.6 -1.0 oxidoreductase NAD protein compare
SMc02867 -1.6 -2.3 multidrug-efflux system transmembrane protein compare
SM_b20260 -1.6 -1.6 hypothetical protein compare
SMc01438 -1.5 -3.6 protease precursor signal peptide protein compare
SMc00918 -1.5 -4.3 ATP phosphoribosyltransferase regulatory subunit compare
SM_b20346 -1.5 -5.1 efflux protein compare
SMc01004 -1.5 -4.6 phosphoribosyl-AMP cyclohydrolase compare
SMc02719 -1.5 -0.8 transposase compare
SMa0846 -1.5 -1.1 transposase, fragment compare
SMc03027 -1.5 -0.9 flagellar basal body rod protein FlgB compare
SMc00576 -1.5 -2.1 hypothetical protein compare
SMc00970 -1.5 -2.2 exodeoxyribonuclease VII small subunit compare
SMc03128 -1.5 -2.3 ABC transporter permease compare
SM_b21120 -1.5 -2.1 hypothetical protein compare
SMa0909 -1.4 -1.2 hypothetical protein compare
SM_b20509 -1.4 -1.1 transcriptional regulator compare
SMc02860 -1.4 -1.3 hypothetical protein compare
SMc04404 -1.4 -0.9 amino acid efflux transmembrane protein compare
SMc00132 -1.4 -1.7 hypothetical protein compare
SMc01419 -1.4 -1.2 RNA polymerase sigma factor protein compare
SMc00085 -1.4 -3.8 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SMc02739 -1.4 -2.1 glycine betaine transport ATP-binding ABC transporter protein compare
SMa2299 -1.4 -1.0 hypothetical protein compare
SM_b20750 -1.4 -1.1 dehydrogenase compare
SMc02041 -1.4 -2.6 short chain dehydrogenase compare
SM_b21455 -1.4 -1.4 hypothetical protein compare
SMc02569 -1.4 -1.6 imidazole glycerol phosphate synthase subunit HisF compare
SM_b21488 -1.4 -5.1 cytochrome o ubiquinol oxidase subunit I conserved
SMa0714 -1.4 -1.9 ABC transporter ATP-binding protein compare
SMc00099 -1.3 -1.6 alkylphosphonate uptake protein compare
SMc01575 -1.3 -5.6 hypothetical protein compare
SMc03091 -1.3 -2.5 arginase compare
SMc00619 -1.3 -1.1 hypothetical protein compare
SMa1158 -1.3 -1.2 hypothetical protein compare
SMc04092 -1.3 -1.5 hypothetical protein compare
SMc02234 -1.3 -1.6 hypothetical protein compare
SM_b20547 -1.3 -1.8 hypothetical protein compare
SMc01757 -1.3 -1.1 hypothetical protein compare
SMc02853 -1.3 -2.1 hypothetical protein compare
SMc02619 -1.3 -2.6 hypothetical protein compare
SMc02718 -1.3 -1.5 hypothetical protein compare
SMa1007 -1.3 -1.9 copper protein compare
SMc04385 -1.3 -3.0 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc02052 -1.3 -0.7 hypothetical protein compare
SMc03186 -1.2 -1.8 transcriptional regulator compare
SMa0448 -1.2 -0.7 hypothetical protein compare
SMc02683 -1.2 -1.4 hypothetical protein compare
SMc00295 -1.2 -1.0 hypothetical protein compare
SM_b21217 -1.2 -3.0 glucosamine kinase (EC 2.7.1.8) (from data) compare
SMc02693 -1.2 -0.8 peptidyl-tRNA hydrolase compare
SMc01236 -1.2 -1.6 hypothetical protein compare
SMc01505 -1.2 -0.9 hypothetical protein compare
SMc02755 -1.2 -2.7 S-adenosyl-L-homocysteine hydrolase compare
SMc02448 -1.2 -1.2 mutator protein 7,8-dihydro-8-oxoguanine-triphosphatase compare
SMc03062 -1.2 -2.0 ABC transporter for D-maltose/D-trehalose/sucrose, permease component 1 (AglF) (from data) compare
SMc01007 -1.2 -1.0 hypothetical protein compare
SMc02591 -1.2 -1.0 hypothetical protein compare
SMc00298 -1.2 -2.6 methionine aminopeptidase compare
SMc01216 -1.2 -1.6 hypothetical protein compare
SMc04238 -1.2 -3.5 hypothetical protein compare
SMc00296 -1.2 -3.5 POLY3-hydroxybutyrate polymerase compare
SM_b20655 -1.2 -0.9 hypothetical protein compare
SMa1091 -1.2 -2.9 hypothetical protein compare
SMa1822 -1.2 -2.1 hypothetical protein compare
SM_b20880 -1.2 -3.7 ATP-dependent RNA helicase compare
SMc02143 -1.2 -2.2 phosphate ABC transporter permease compare
SMa0125 -1.1 -2.3 co-chaperonin GroES compare
SMc02050 -1.1 -1.4 trigger factor compare
SM_b20290 -1.1 -1.4 transcriptional regulator compare
SMc03051 -1.1 -0.9 flagellar biosynthesis repressor FlbT compare
SM_b21421 -1.1 -1.8 sugar uptake ABC transporter substrate-binding protein precursor compare
SM_b21007 -1.1 -1.5 hypothetical protein compare
SMa1210 -1.1 -2.1 nitrogen fixation protein FixH compare
SMa0543 -1.1 -0.7 hypothetical protein compare
SM_b20527 -1.1 -2.8 hypothetical protein compare
SMc01974 -1.1 -1.5 transcriptional regulator compare
SMc02582 -1.1 -2.3 hypothetical protein compare
SMc02178 -1.1 -1.6 hypothetical protein compare
SMc00941 -1.1 -0.9 hypothetical protein compare
SMc01701 -1.1 -1.5 hypothetical protein compare
SMa5015 -1.1 -1.2 hypothetical protein compare
SMc01836 -1.1 -1.4 hypothetical protein compare
SMc01501 -1.1 -1.2 mannitol 2-dehydrogenase compare
SMa0346 -1.1 -2.4 NAD(P)H dehydrogenase compare
SMc02979 -1.1 -2.5 hypothetical protein compare
SM_b21210 -1.1 -2.0 two-component response regulator protein compare
SM_b22015 -1.1 -2.5 LysR family transcriptional regulator compare
SMc00982 -1.1 -2.8 dioxygenase compare
SMa2265 -1.1 -3.0 hypothetical protein compare
SMa2034 -1.1 -1.0 hypothetical protein compare
SMa1838 -1.1 -1.1 dehydrogenase compare
SMa1168 -1.1 -1.8 Dehydrogenase, FAD-dependent compare
SMc02544 -1.1 -0.5 hypothetical protein compare
SMc04389 -1.1 -1.3 hydroxypyruvate reductase compare
SM_b21036 -1.0 -1.3 hypothetical protein compare
SMc02309 -1.0 -2.1 arsenate reductase compare
SMc00019 -1.0 -1.4 hypothetical protein compare
SMc00341 -1.0 -1.8 hypothetical protein compare
SMa1561 -1.0 -3.0 chemotaxis protein CheB compare
SMa2412 -1.0 -5.1 RhrA transcriptional activator compare
SMa0144 -1.0 -0.5 hypothetical protein compare
SMa0995 -1.0 -0.9 TRm5 transposase compare
SM_b20805 -1.0 -3.0 glycosyltransferase compare
SM_b20010 -1.0 -2.5 hypothetical protein compare
SMa2141 -1.0 -1.6 formyltetrahydrofolate deformylase compare
SM_b21479 -1.0 -1.0 hypothetical protein compare
SMc02822 -1.0 -1.8 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For stress copper (II) chloride dihydrate in Sinorhizobium meliloti 1021

For stress copper (II) chloride dihydrate across organisms