Experiment set3IT037 for Cupriavidus basilensis FW507-4G11

Compare to:

R2A 23C

200 most important genes:

  gene name fitness t score description  
RR42_RS33255 -3.8 -5.1 protein-tyrosine phosphatase compare
RR42_RS37400 -3.7 -1.8 6-phosphogluconolactonase compare
RR42_RS18420 -3.3 -8.5 hypothetical protein compare
RR42_RS19005 -2.9 -6.3 3-dehydroquinate synthase compare
RR42_RS00715 -2.7 -2.5 ferritin compare
RR42_RS12040 -2.5 -11.4 MFS transporter compare
RR42_RS07555 -2.5 -2.8 potassium transporter Kup compare
RR42_RS21220 -2.3 -3.0 iron transporter FeoB compare
RR42_RS07380 -2.2 -4.8 dihydrolipoamide dehydrogenase compare
RR42_RS13910 -2.1 -9.3 glutamate racemase compare
RR42_RS03095 -2.1 -3.1 succinyl-CoA synthetase subunit beta compare
RR42_RS33260 -2.1 -7.9 multidrug MFS transporter compare
RR42_RS20205 -2.1 -3.6 chromosome partitioning protein compare
RR42_RS18855 -2.0 -3.9 preprotein translocase compare
RR42_RS04700 -2.0 -1.5 ribonuclease G compare
RR42_RS08175 -2.0 -1.8 hypothetical protein compare
RR42_RS06095 -2.0 -2.9 hypothetical protein compare
RR42_RS05860 -2.0 -5.4 phospho-2-dehydro-3-deoxyheptonate aldolase compare
RR42_RS09015 -1.9 -4.1 trigger factor compare
RR42_RS04325 -1.8 -2.5 membrane protein compare
RR42_RS14360 -1.8 -2.0 tryptophan synthase subunit alpha compare
RR42_RS11770 -1.8 -2.5 cyclase compare
RR42_RS14365 -1.7 -2.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
RR42_RS04475 -1.7 -9.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
RR42_RS12925 -1.7 -3.0 ATPase compare
RR42_RS12015 -1.7 -2.3 dihydrolipoamide acyltransferase compare
RR42_RS31830 -1.7 -2.2 short-chain dehydrogenase compare
RR42_RS33250 -1.6 -6.7 tyrosine protein kinase compare
RR42_RS01920 -1.6 -3.5 protoheme IX farnesyltransferase compare
RR42_RS07365 -1.6 -2.7 pyruvate dehydrogenase compare
RR42_RS18305 -1.6 -3.5 anthranilate phosphoribosyltransferase compare
RR42_RS09580 -1.6 -1.5 hypothetical protein compare
RR42_RS18300 -1.5 -4.7 anthranilate synthase subunit II compare
RR42_RS03360 -1.5 -5.5 fructose ABC transporter, ATPase component (FrcA) (from data) compare
RR42_RS18725 -1.5 -2.3 hypothetical protein compare
RR42_RS06485 -1.5 -7.1 chorismate synthase compare
RR42_RS06250 -1.4 -2.0 dihydrodipicolinate synthase compare
RR42_RS15015 -1.4 -1.3 exodeoxyribonuclease VII small subunit compare
RR42_RS14755 -1.4 -3.2 hypothetical protein compare
RR42_RS19010 -1.4 -5.0 shikimate kinase compare
RR42_RS19085 -1.4 -2.4 cytochrome C biogenesis protein ResB compare
RR42_RS19090 -1.4 -1.3 cytochrome C compare
RR42_RS05485 -1.4 -3.1 polynucleotide phosphorylase/polyadenylase compare
RR42_RS17635 -1.4 -3.9 magnesium transporter CorA compare
RR42_RS13040 -1.4 -3.4 iron transporter compare
RR42_RS22940 -1.4 -3.5 TetR family transcriptional regulator compare
RR42_RS15090 -1.4 -4.8 DNA helicase compare
RR42_RS13905 -1.3 -3.2 fumarate hydratase compare
RR42_RS02420 -1.3 -1.3 SAM-dependent methyltransferase compare
RR42_RS35895 -1.3 -3.7 PadR family transcriptional regulator compare
RR42_RS04895 -1.3 -7.9 serine/threonine protein phosphatase compare
RR42_RS02810 -1.3 -2.1 acyl-phosphate glycerol 3-phosphate acyltransferase compare
RR42_RS17060 -1.3 -8.8 histidine kinase compare
RR42_RS17620 -1.3 -3.7 phosphatidylglycerophosphatase compare
RR42_RS00295 -1.3 -5.0 DEAD/DEAH box helicase compare
RR42_RS21150 -1.2 -2.4 hypothetical protein compare
RR42_RS31530 -1.2 -2.5 histidine kinase compare
RR42_RS04535 -1.2 -3.3 cysteine synthase compare
RR42_RS15785 -1.2 -5.9 glycosyl transferase family 28 compare
RR42_RS04460 -1.2 -5.7 chorismate mutase compare
RR42_RS15740 -1.2 -1.9 hypothetical protein compare
RR42_RS03370 -1.2 -2.3 fructose ABC transporter, substrate-binding component (FrcB) (from data) compare
RR42_RS02045 -1.2 -7.5 GTPase compare
RR42_RS00510 -1.2 -2.8 transcriptional regulator compare
RR42_RS06125 -1.2 -3.3 phosphogluconate dehydratase compare
RR42_RS18270 -1.2 -3.3 murein transglycosylase compare
RR42_RS32740 -1.2 -1.1 enoyl-CoA hydratase compare
RR42_RS26935 -1.2 -4.0 farnesyl-diphosphate farnesyltransferase compare
RR42_RS18295 -1.1 -7.6 anthranilate synthase component I compare
RR42_RS12615 -1.1 -2.7 LexA family transcriptional regulator compare
RR42_RS36325 -1.1 -2.6 esterase compare
RR42_RS00830 -1.1 -3.9 cell division protein FtsN compare
RR42_RS02775 -1.1 -1.9 molecular chaperone SurA compare
RR42_RS06880 -1.1 -1.9 hypothetical protein compare
RR42_RS17930 -1.1 -4.1 RNA pyrophosphohydrolase compare
RR42_RS03080 -1.1 -1.8 recombinase RecA compare
RR42_RS15795 -1.1 -4.4 spore coat protein compare
RR42_RS15775 -1.1 -4.4 N-acetylneuraminate synthase compare
RR42_RS02705 -1.1 -2.4 Holliday junction DNA helicase RuvA compare
RR42_RS02950 -1.1 -1.8 malonate decarboxylase subunit beta compare
RR42_RS17355 -1.1 -1.1 hypothetical protein compare
RR42_RS15905 -1.0 -6.4 phosphoenolpyruvate carboxylase compare
RR42_RS12550 -1.0 -2.9 hypothetical protein compare
RR42_RS11580 -1.0 -2.1 hypothetical protein compare
RR42_RS15845 -1.0 -2.2 biotin transporter BioY compare
RR42_RS12860 -1.0 -2.3 pseudouridine synthase compare
RR42_RS16220 -1.0 -1.0 DNA polymerase III subunit chi compare
RR42_RS13935 -1.0 -2.0 hemin transporter compare
RR42_RS19895 -1.0 -1.4 elongation factor GreAB compare
RR42_RS36415 -1.0 -1.9 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
RR42_RS15745 -1.0 -4.8 group1 glycosyl transferase compare
RR42_RS05750 -1.0 -1.2 fructose 2,6-bisphosphatase compare
RR42_RS04055 -1.0 -1.7 hypothetical protein compare
RR42_RS07605 -1.0 -4.4 poly-beta-hydroxybutyrate polymerase compare
RR42_RS13275 -1.0 -3.7 antibiotic biosynthesis monooxygenase compare
RR42_RS07360 -1.0 -2.3 ATPase compare
RR42_RS30320 -1.0 -2.1 hypothetical protein compare
RR42_RS32585 -1.0 -1.8 cytochrome C oxidase compare
RR42_RS05305 -1.0 -4.1 NADP oxidoreductase compare
RR42_RS24820 -1.0 -2.0 hypothetical protein compare
RR42_RS24510 -1.0 -1.8 hypothetical protein compare
RR42_RS33245 -1.0 -5.0 mannose-1-phosphate guanyltransferase compare
RR42_RS33240 -0.9 -6.9 GDP-L-fucose synthase compare
RR42_RS03365 -0.9 -2.3 fructose ABC transporter, permease component (FrcC) (from data) compare
RR42_RS03920 -0.9 -2.1 rubredoxin compare
RR42_RS00600 -0.9 -0.4 DeoR family transcriptional regulator compare
RR42_RS13065 -0.9 -5.9 ribonuclease R compare
RR42_RS25510 -0.9 -1.5 short-chain dehydrogenase compare
RR42_RS13800 -0.9 -3.3 formyltetrahydrofolate deformylase compare
RR42_RS31625 -0.9 -3.1 amino acid ABC transporter compare
RR42_RS20775 -0.9 -0.8 hypothetical protein compare
RR42_RS09085 -0.9 -1.7 C4-dicarboxylate ABC transporter permease compare
RR42_RS23515 -0.9 -3.5 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
RR42_RS25785 -0.9 -2.1 TetR family transcriptional regulator compare
RR42_RS18670 -0.9 -2.6 metal-dependent hydrolase compare
RR42_RS02870 -0.9 -3.3 RNA helicase compare
RR42_RS33235 -0.9 -4.6 GDP-mannose 4,6-dehydratase compare
RR42_RS03345 -0.9 -3.2 recombinase XerD compare
RR42_RS21075 -0.9 -1.2 phosphoribosyltransferase compare
RR42_RS03560 -0.9 -2.0 hypothetical protein compare
RR42_RS13240 -0.9 -3.9 mannosyltransferase compare
RR42_RS31330 -0.9 -1.5 LysR family transcriptional regulator compare
RR42_RS26900 -0.9 -1.9 enoyl-CoA hydratase compare
RR42_RS23650 -0.9 -1.4 flagellar protein compare
RR42_RS35725 -0.9 -1.9 flagellar biosynthesis protein FlgB compare
RR42_RS08855 -0.8 -2.2 hypothetical protein compare
RR42_RS19655 -0.8 -1.2 tRNA-Ala compare
RR42_RS22935 -0.8 -2.4 metal transporter compare
RR42_RS18815 -0.8 -3.8 cytochrome C compare
RR42_RS34305 -0.8 -2.6 glutamine ABC transporter ATP-binding protein compare
RR42_RS13225 -0.8 -3.4 hypothetical protein compare
RR42_RS31920 -0.8 -1.1 acetyl-CoA acetyltransferase compare
RR42_RS05755 -0.8 -2.0 enoyl-CoA hydratase compare
RR42_RS18850 -0.8 -1.8 preprotein translocase subunit TatC compare
RR42_RS06355 -0.8 -3.1 Fe-S cluster assembly protein HesB compare
RR42_RS31940 -0.8 -2.8 2-nitropropane dioxygenase compare
RR42_RS09240 -0.8 -1.6 MFS transporter compare
RR42_RS24690 -0.8 -1.0 hypothetical protein compare
RR42_RS15060 -0.8 -1.5 membrane protein compare
RR42_RS06690 -0.8 -2.2 hypothetical protein compare
RR42_RS37240 -0.8 -1.0 hypothetical protein compare
RR42_RS05325 -0.8 -4.0 adenine deaminase compare
RR42_RS05500 -0.8 -0.9 preprotein translocase subunit SecG compare
RR42_RS12790 -0.8 -1.8 ACP phosphodiesterase compare
RR42_RS15895 -0.8 -4.0 uroporphyrinogen III methyltransferase compare
RR42_RS19870 -0.8 -2.5 pyruvate kinase compare
RR42_RS07150 -0.8 -1.1 hypothetical protein compare
RR42_RS02885 -0.8 -4.9 acetylornithine deacetylase compare
RR42_RS16525 -0.8 -2.1 anti-sigma factor compare
RR42_RS17805 -0.8 -0.7 hypothetical protein compare
RR42_RS34845 -0.8 -3.9 chemotaxis protein compare
RR42_RS12975 -0.8 -3.2 haloacid dehalogenase compare
RR42_RS13015 -0.8 -3.8 fatty acid hydroxylase compare
RR42_RS21955 -0.8 -1.2 hypothetical protein compare
RR42_RS26895 -0.8 -4.1 3-methylcrotonyl-CoA carboxylase compare
RR42_RS18365 -0.8 -1.4 GTP-binding protein compare
RR42_RS00665 -0.8 -3.6 pyrrolidone-carboxylate peptidase compare
RR42_RS22990 -0.8 -2.3 23S ribosomal RNA compare
RR42_RS35020 -0.8 -2.4 rubredoxin compare
RR42_RS00545 -0.8 -2.2 transglutaminase compare
RR42_RS05420 -0.8 -2.7 membrane protein compare
RR42_RS20005 -0.8 -2.6 hypothetical protein compare
RR42_RS01385 -0.8 -2.4 5,10-methylenetetrahydrofolate reductase compare
RR42_RS14055 -0.8 -1.4 elongation factor 4 compare
RR42_RS20000 -0.7 -3.2 lytic transglycosylase compare
RR42_RS24665 -0.7 -2.1 hypothetical protein compare
RR42_RS07565 -0.7 -4.2 transcription accessory protein compare
RR42_RS31655 -0.7 -3.4 hypothetical protein compare
RR42_RS04955 -0.7 -1.8 hypothetical protein compare
RR42_RS17390 -0.7 -3.7 ATP-dependent DNA helicase RecG compare
RR42_RS02380 -0.7 -3.1 FAD-linked oxidase compare
RR42_RS13165 -0.7 -4.0 membrane protein compare
RR42_RS03385 -0.7 -3.3 sugar kinase compare
RR42_RS36400 -0.7 -1.0 hypothetical protein compare
RR42_RS17665 -0.7 -1.3 chorismate lyase compare
RR42_RS01820 -0.7 -3.8 peptidase S41 compare
RR42_RS13270 -0.7 -4.2 recombination protein RecR compare
RR42_RS01095 -0.7 -1.4 membrane protein compare
RR42_RS04675 -0.7 -1.9 alkylhydroperoxidase compare
RR42_RS15290 -0.7 -1.8 cupin compare
RR42_RS09590 -0.7 -1.8 hypothetical protein compare
RR42_RS35780 -0.7 -1.8 chemotaxis protein CheY compare
RR42_RS13060 -0.7 -2.3 23S rRNA methyltransferase compare
RR42_RS15790 -0.7 -3.8 aminotransferase class III compare
RR42_RS33575 -0.7 -1.5 hypothetical protein compare
RR42_RS01775 -0.7 -2.5 glutamate--cysteine ligase compare
RR42_RS00610 -0.7 -3.1 hypothetical protein compare
RR42_RS07245 -0.7 -1.5 hypothetical protein compare
RR42_RS17685 -0.7 -3.7 alkyl hydroperoxide reductase compare
RR42_RS29425 -0.7 -3.2 enoyl-CoA hydratase compare
RR42_RS28720 -0.7 -1.2 hypothetical protein compare
RR42_RS27710 -0.7 -2.1 LysR family transcriptional regulator compare
RR42_RS00235 -0.7 -2.4 membrane protein compare
RR42_RS17050 -0.7 -3.3 phosphoribosylglycinamide formyltransferase compare
RR42_RS24790 -0.7 -1.4 LysR family transcriptional regulator compare
RR42_RS26130 -0.7 -1.7 C4-dicarboxylate ABC transporter compare
RR42_RS16135 -0.7 -2.4 ABC transporter permease compare
RR42_RS12590 -0.7 -0.8 50S ribosomal protein L9 compare
RR42_RS23305 -0.7 -0.9 hypothetical protein compare
RR42_RS15880 -0.7 -3.5 pseudouridine synthase compare


Specific Phenotypes

For 1 genes in this experiment