Experiment set3IT036 for Pseudomonas syringae pv. syringae B728a

Compare to:

epiphytic; Lima bean

200 most important genes:

  gene name fitness t score description  
Psyr_4581 -6.4 -4.4 anthranilate synthase, component II compare
Psyr_1984 -6.2 -4.3 3-isopropylmalate dehydratase, small subunit compare
Psyr_0557 -5.4 -3.7 phosphoserine phosphatase compare
Psyr_4897 -4.9 -5.8 imidazoleglycerol-phosphate dehydratase compare
Psyr_2462 -4.9 -5.8 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_4580 -4.8 -5.7 anthranilate phosphoribosyltransferase compare
Psyr_1985 -4.8 -9.2 3-isopropylmalate dehydrogenase compare
Psyr_0846 -4.7 -10.9 acetolactate synthase, large subunit compare
Psyr_4609 -4.7 -14.1 anthranilate synthase, component I compare
Psyr_1663 -4.6 -5.4 phosphoribosylanthranilate isomerase compare
Psyr_0529 -4.6 -7.6 Glycosyl transferase, group 1 compare
Psyr_4369 -4.5 -7.4 glutamate-5-semialdehyde dehydrogenase compare
Psyr_0474 -4.4 -10.6 homoserine O-acetyltransferase compare
Psyr_4894 -4.4 -9.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_4896 -4.4 -7.3 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_0847 -4.4 -8.8 acetolactate synthase, small subunit compare
Psyr_1983 -4.4 -6.6 3-isopropylmalate dehydratase, large subunit compare
Psyr_0473 -4.3 -7.7 Methionine biosynthesis MetW compare
Psyr_3174 -4.3 -6.5 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_0034 -4.2 -2.9 tryptophan synthase, beta chain compare
Psyr_1668 -4.1 -7.9 amidophosphoribosyltransferase compare
Psyr_3555 -4.1 -2.8 aspartate kinase compare
Psyr_0411 -4.1 -19.4 glutamate synthase (NADPH) large subunit compare
Psyr_0917 -4.1 -8.7 ABC-2 compare
Psyr_1669 -4.0 -10.6 O-succinylhomoserine sulfhydrylase compare
Psyr_4133 -4.0 -14.7 histidinol dehydrogenase compare
Psyr_1914 -4.0 -11.7 transaldolase compare
Psyr_1269 -4.0 -4.7 phosphoribosylformylglycinamidine synthase compare
Psyr_1408 -4.0 -3.8 Holliday junction endonuclease RuvC compare
Psyr_0412 -3.9 -14.4 glutamate synthase (NADPH) small subunit compare
Psyr_0531 -3.9 -3.7 LmbE-like protein compare
Psyr_4270 -3.8 -9.9 serine hydroxymethyltransferase compare
Psyr_0704 -3.7 -10.6 glutamate 5-kinase compare
Psyr_4852 -3.7 -10.6 D-3-phosphoglycerate dehydrogenase compare
Psyr_0826 -3.6 -8.7 glucose-6-phosphate isomerase compare
Psyr_0469 -3.6 -11.5 dihydroxyacid dehydratase compare
Psyr_0848 -3.4 -9.4 ketol-acid reductoisomerase compare
Psyr_5065 -3.3 -8.8 ATP-dependent DNA helicase UvrD compare
Psyr_1373 -3.3 -3.2 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0831 -3.3 -2.3 Two-component response regulator CbrB compare
Psyr_0918 -3.2 -15.2 ABC transporter compare
Psyr_4893 -3.2 -3.1 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_4579 -3.2 -8.4 indole-3-glycerol phosphate synthase compare
Psyr_0576 -3.2 -3.6 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_4132 -3.2 -10.9 histidinol phosphate aminotransferase apoenzyme compare
Psyr_4687 -3.1 -8.1 biotin synthase compare
Psyr_4134 -3.0 -11.6 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_0532 -3.0 -6.6 conserved hypothetical protein compare
Psyr_4627 -2.9 -3.9 dimethyladenosine transferase compare
Psyr_4822 -2.9 -4.1 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_0827 -2.9 -5.4 pantothenate synthetase compare
Psyr_4512 -2.9 -7.8 putative phage-related protein compare
Psyr_2980 -2.8 -4.3 UDP-glucose pyrophosphorylase compare
Psyr_0033 -2.8 -5.2 tryptophan synthase, alpha chain compare
Psyr_4407 -2.8 -4.5 phosphoribosylamine--glycine ligase compare
Psyr_1108 -2.7 -12.1 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_4125 -2.7 -5.3 Protein of unknown function DUF1043 compare
Psyr_1410 -2.7 -5.0 Holliday junction DNA helicase RuvB compare
Psyr_0386 -2.6 -3.5 phosphoribosyl-AMP cyclohydrolase compare
Psyr_2077 -2.6 -5.8 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_4128 -2.6 -10.1 sulfate adenylyltransferase subunit 2 compare
Psyr_0378 -2.5 -10.5 Glycosyl transferase, family 2 compare
Psyr_0951 -2.5 -3.2 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4686 -2.5 -7.1 8-amino-7-oxononanoate synthase compare
Psyr_4408 -2.5 -9.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_3805 -2.4 -4.5 hypothetical protein compare
Psyr_0377 -2.4 -9.5 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_1341 -2.4 -14.9 Protein-P-II uridylyltransferase compare
Psyr_0025 -2.4 -4.8 shikimate dehydrogenase compare
Psyr_3287 -2.3 -3.7 DNA topoisomerase I compare
Psyr_4018 -2.3 -8.3 Formyltetrahydrofolate deformylase compare
Psyr_4684 -2.2 -3.5 biotin synthesis protein BioC compare
Psyr_4126 -2.2 -12.4 adenylylsulfate kinase / sulfate adenylyltransferase subunit 1 compare
Psyr_2461 -2.2 -3.7 Uncharacterized conserved protein UCP030820 compare
Psyr_4362 -2.2 -3.5 Rare lipoprotein A compare
Psyr_4821 -2.1 -6.3 PAS/PAC sensor signal transduction histidine kinase compare
Psyr_4683 -2.0 -4.9 dethiobiotin synthase compare
Psyr_1140 -2.0 -4.5 Disulfide bond formation protein DsbB compare
Psyr_1544 -2.0 -6.0 SirA-like protein compare
Psyr_4940 -2.0 -2.4 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_1257 -2.0 -8.1 2-isopropylmalate synthase compare
Psyr_0454 -2.0 -5.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1247 -1.9 -3.3 conserved hypothetical protein compare
Psyr_1613 -1.9 -4.6 septum site-determining protein MinC compare
Psyr_0208 -1.9 -7.2 endoribonuclease L-PSP compare
Psyr_1109 -1.9 -8.8 6-phosphogluconate dehydratase compare
Psyr_0983 -1.9 -7.9 Protein of unknown function DUF159 compare
Psyr_4991 -1.8 -2.4 hypothetical protein compare
Psyr_3889 -1.8 -3.3 conserved hypothetical protein compare
Psyr_0811 -1.8 -7.5 Integral membrane protein TerC compare
Psyr_4161 -1.8 -2.3 Rod shape-determining protein MreD compare
Psyr_3886 -1.7 -2.5 methionyl-tRNA synthetase compare
Psyr_4634 -1.7 -2.5 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_4158 -1.7 -8.4 conserved hypothetical protein compare
Psyr_1910 -1.7 -5.9 VacJ-like lipoprotein compare
Psyr_0111 -1.6 -7.8 hypothetical protein compare
Psyr_0832 -1.6 -7.6 Two-component sensor kinase CbrA compare
Psyr_3008 -1.6 -5.6 Undecaprenyl-diphosphatase compare
Psyr_4844 -1.6 -6.4 HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2 compare
Psyr_1747 -1.6 -3.9 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_1751 -1.6 -4.6 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_5060 -1.6 -9.5 Oxaloacetate decarboxylase, alpha subunit compare
Psyr_5061 -1.5 -8.4 acetyl-CoA carboxylase carboxyltransferase subunit alpha / biotin carboxylase compare
Psyr_1120 -1.5 -7.9 glucose-6-phosphate 1-dehydrogenase compare
Psyr_4887 -1.5 -6.9 Peptidase S41A, C-terminal protease compare
Psyr_4882 -1.5 -6.2 protein translocase subunit secB compare
Psyr_3947 -1.5 -2.1 Methyltransferase, putative compare
Psyr_0976 -1.5 -4.2 Malate:quinone-oxidoreductase compare
Psyr_1121 -1.5 -2.1 6-phosphogluconolactonase compare
Psyr_1941 -1.5 -2.0 ATP-binding region, ATPase-like:Histidine kinase compare
Psyr_0579 -1.5 -8.4 RNAse R compare
Psyr_0393 -1.4 -3.6 Protein of unknown function DUF971 compare
Psyr_4144 -1.4 -2.1 Protein of unknown function DUF1239 compare
Psyr_0528 -1.4 -2.4 Carbamoyltransferase compare
Psyr_1748 -1.4 -4.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_1614 -1.4 -2.8 lipid A biosynthesis acyltransferase compare
Psyr_3425 -1.3 -2.8 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_2221 -1.3 -2.9 sarcosine oxidase, gamma subunit compare
Psyr_1962 -1.3 -7.4 TonB-dependent siderophore receptor compare
Psyr_4070 -1.3 -5.0 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4127 -1.3 -2.7 S23 ribosomal compare
Psyr_2747 -1.3 -3.0 amino acid/amide ABC transporter substrate-binding protein, HAAT family compare
Psyr_4884 -1.3 -4.7 Rhodanese-like protein compare
Psyr_1069 -1.3 -4.1 molybdopterin synthase subunit MoaE compare
Psyr_3014 -1.3 -3.6 protoporphyrin IX magnesium-chelatase compare
Psyr_3286 -1.3 -6.2 conserved hypothetical protein compare
Psyr_4029 -1.3 -5.5 pyruvate kinase compare
Psyr_0201 -1.3 -5.3 ATP-dependent DNA helicase RecG compare
Psyr_1955 -1.3 -2.2 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_1249 -1.3 -4.2 histidyl-tRNA synthetase compare
Psyr_3133 -1.3 -1.9 Amidohydrolase 2 compare
Psyr_3179 -1.2 -2.1 DNA translocase FtsK compare
Psyr_4754 -1.2 -2.3 16S rRNA m(2)G-966 methyltransferase compare
Psyr_0919 -1.2 -8.0 Chromosome segregation ATPase-like protein compare
Psyr_4838 -1.2 -3.2 transcriptional regulator, MerR family compare
Psyr_3552 -1.2 -2.1 Divalent cation transporter compare
Psyr_3691 -1.2 -5.3 conserved hypothetical protein compare
Psyr_1911 -1.2 -3.5 conserved hypothetical protein compare
Psyr_0920 -1.2 -9.9 Glycosyl transferase, group 1 compare
Psyr_0167 -1.2 -2.8 hypothetical protein compare
Psyr_1094 -1.2 -3.4 cold-shock DNA-binding protein family compare
Psyr_1963 -1.2 -5.3 Cyclic peptide transporter compare
Psyr_4417 -1.1 -1.9 Ferredoxin--nitrite reductase compare
Psyr_0535 -1.1 -2.3 toluene tolerance protein, putative compare
Psyr_0264 -1.1 -4.7 Alginate biosynthesis sensor protein KinB compare
Psyr_0335 -1.1 -6.3 membrane protein, putative compare
Psyr_0954 -1.1 -2.6 Protein of unknown function UPF0153 compare
Psyr_4567 -1.1 -3.3 Protein of unknown function UPF0075 compare
Psyr_3146 -1.1 -1.4 general secretion pathway protein J, putative compare
Psyr_4898 -1.1 -5.7 aromatic amino acid aminotransferase apoenzyme compare
Psyr_0294 -1.1 -3.8 Exopolyphosphatase compare
Psyr_4140 -1.0 -2.3 Protein of unknown function DUF140 compare
Psyr_5062 -1.0 -3.7 transcriptional regulator, LysR family compare
Psyr_2756 -1.0 -5.4 Molybdenum ABC transporter, periplasmic binding protein compare
Psyr_3262 -1.0 -1.4 dnaK suppressor protein, putative compare
Psyr_4341 -1.0 -4.9 thiamine-phosphate diphosphorylase compare
Psyr_4623 -1.0 -6.3 Aminoglycoside phosphotransferase compare
Psyr_1251 -1.0 -2.8 quinoprotein compare
Psyr_3036 -1.0 -2.5 transcriptional regulator, TetR family compare
Psyr_0046 -1.0 -3.5 conserved hypothetical protein compare
Psyr_2137 -1.0 -2.2 molybdopterin molybdochelatase compare
Psyr_3450 -1.0 -3.6 Hpt compare
Psyr_3338 -1.0 -3.7 gluconate permease GntT compare
Psyr_0202 -1.0 -3.6 transcriptional regulator, LysR family compare
Psyr_4660 -1.0 -3.3 Formate/nitrite transporter compare
Psyr_2970 -1.0 -2.8 TPR repeat protein:TPR repeat protein compare
Psyr_1965 -1.0 -4.2 Twin-arginine translocation pathway signal compare
Psyr_4351 -1.0 -2.6 conserved domain protein compare
Psyr_3433 -0.9 -3.0 Protein-glutamate methylesterase compare
Psyr_0383 -0.9 -1.7 Twin-arginine translocation protein TatB compare
Psyr_3637 -0.9 -6.8 Glycosyl transferase, family 4 compare
Psyr_0447 -0.9 -2.2 malonate decarboxylase subunit, putative compare
Psyr_4277 -0.9 -4.1 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region compare
Psyr_5129 -0.9 -2.8 chromosome segregation DNA-binding protein compare
Psyr_3202 -0.9 -1.7 NADH dehydrogenase subunit G compare
Psyr_2557 -0.9 -2.0 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_0947 -0.9 -3.9 TPR repeat protein:TPR repeat protein compare
Psyr_0830 -0.9 -3.8 Poly(A) polymerase compare
Psyr_2292 -0.9 -1.5 L-glutaminase compare
Psyr_3090 -0.9 -2.3 hypothetical protein compare
Psyr_1667 -0.9 -4.2 Colicin V production protein compare
Psyr_1067 -0.9 -2.7 GTP cyclohydrolase subunit MoaC compare
Psyr_5102 -0.9 -2.1 ABC transporter compare
Psyr_0103 -0.9 -3.7 conserved hypothetical protein compare
Psyr_4089 -0.9 -4.1 PAS compare
Psyr_0914 -0.9 -5.3 Glycosyl transferase, group 1 compare
Psyr_3099 -0.9 -4.6 assimilatory nitrite reductase (NAD(P)H) large subunit precursor compare
Psyr_3675 -0.9 -2.5 adenosylcobinamide kinase compare
Psyr_1688 -0.9 -1.8 Protein of unknown function DUF1315 compare
Psyr_1645 -0.9 -2.8 phosphate:acyl-[acyl carrier protein] acyltransferase compare
Psyr_3020 -0.9 -1.2 precorrin-4 C11-methyltransferase compare
Psyr_4122 -0.9 -3.4 AFG1-like ATPase compare
Psyr_0724 -0.9 -2.1 conserved hypothetical protein compare
Psyr_2327 -0.9 -2.3 GTP cyclohydrolase subunit MoaA compare
Psyr_3563 -0.9 -3.7 arginine succinyltransferase compare
Psyr_3779 -0.9 -2.4 GCN5-related N-acetyltransferase compare
Psyr_3854 -0.9 -1.1 OmpA/MotB compare
Psyr_4078 -0.9 -6.2 AmpG-related permease compare
Psyr_4622 -0.9 -2.7 Nucleotidyl transferase compare
Psyr_4340 -0.9 -4.2 phosphomethylpyrimidine kinase, putative compare


Specific Phenotypes

For 7 genes in this experiment