Experiment set3IT036 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE

200 most important genes:

  gene name fitness t score description  
MMP_RS07845 -7.8 -1.9 LL-diaminopimelate aminotransferase compare
MMP_RS02190 -7.6 -1.8 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS07645 -6.8 -3.1 aldehyde dehydrogenase family protein compare
MMP_RS01175 -6.4 -3.0 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08105 -6.3 -3.8 6-carboxyhexanoate--CoA ligase compare
MMP_RS08100 -6.2 -4.2 8-amino-7-oxononanoate synthase compare
MMP_RS08440 -6.2 -1.9 cell division protein SepF compare
MMP_RS08095 -5.8 -4.0 dethiobiotin synthase compare
MMP_RS06975 -5.8 -1.4 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS02195 -5.6 -2.0 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01940 -5.6 -2.0 MoxR family ATPase compare
MMP_RS01980 -5.6 -10.9 trimeric intracellular cation channel family protein compare
MMP_RS04500 -5.5 -13.4 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS07600 -5.5 -1.5 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS07750 -5.5 -3.2 DUF357 domain-containing protein compare
MMP_RS02240 -5.4 -1.8 methanogenesis marker 7 protein compare
MMP_RS06885 -5.4 -1.6 50S ribosome-binding GTPase compare
MMP_RS06625 -5.3 -1.5 DNA primase compare
MMP_RS01225 -5.2 -3.7 DUF5379 domain-containing protein compare
MMP_RS01725 -5.2 -2.6 class I SAM-dependent methyltransferase family protein compare
MMP_RS00895 -5.2 -2.4 hypothetical protein compare
MMP_RS06120 -5.1 -1.4 UPF0147 family protein compare
MMP_RS01220 -5.1 -6.3 hypothetical protein compare
MMP_RS01325 -5.1 -1.4 dihydroneopterin aldolase family protein compare
MMP_RS06895 -5.0 -1.2 selenocysteine-specific translation elongation factor compare
MMP_RS00520 -4.9 -1.2 RNA polymerase Rpb4 family protein compare
MMP_RS08210 -4.9 -1.3 phosphatidylglycerophosphatase A compare
MMP_RS07540 -4.9 -2.7 CBS domain-containing protein compare
MMP_RS03700 -4.8 -6.6 sodium:proton antiporter compare
MMP_RS01020 -4.8 -0.7 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS00110 -4.8 -1.6 hypothetical protein compare
MMP_RS09020 -4.8 -1.1 hypothetical protein compare
MMP_RS05930 -4.7 -1.5 3-isopropylmalate dehydratase large subunit compare
MMP_RS03025 -4.7 -3.4 molybdenum cofactor guanylyltransferase compare
MMP_RS02355 -4.7 -1.9 30S ribosomal protein S27ae compare
MMP_RS04720 -4.6 -1.6 DedA family protein compare
MMP_RS01800 -4.6 -2.0 TIGR00303 family protein compare
MMP_RS08820 -4.6 -4.0 hypothetical protein compare
MMP_RS04710 -4.5 -1.1 hypothetical protein compare
MMP_RS07075 -4.5 -1.9 phosphomannomutase/phosphoglucomutase compare
MMP_RS08435 -4.5 -1.8 Era-like GTP-binding protein compare
MMP_RS06270 -4.5 -4.4 TIGR00300 family protein compare
MMP_RS00685 -4.4 -2.9 2-phospho-L-lactate guanylyltransferase compare
MMP_RS03435 -4.4 -1.2 ketol-acid reductoisomerase compare
MMP_RS02340 -4.4 -1.2 DNA-directed RNA polymerase subunit E'' compare
MMP_RS08715 -4.4 -1.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07605 -4.3 -2.5 diadenylate cyclase compare
MMP_RS06400 -4.3 -1.0 4Fe-4S binding protein compare
MMP_RS07380 -4.3 -1.3 transcription elongation factor Spt5 compare
MMP_RS01910 -4.2 -2.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS03400 -4.2 -1.8 archease compare
MMP_RS06475 -4.2 -2.7 FAD-dependent oxidoreductase compare
MMP_RS02345 -4.2 -2.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS06730 -4.1 -1.1 phosphopantothenate/pantothenate synthetase compare
MMP_RS01005 -4.1 -0.8 riboflavin synthase compare
MMP_RS07195 -4.1 -6.3 M20 family metallo-hydrolase compare
MMP_RS01915 -4.1 -6.9 DUF354 domain-containing protein compare
MMP_RS00300 -4.0 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06930 -4.0 -9.2 MBL fold metallo-hydrolase compare
MMP_RS03015 -4.0 -6.3 GTP 3' 8-cyclase MoaA compare
MMP_RS06285 -4.0 -1.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS01955 -4.0 -1.2 hypothetical protein compare
MMP_RS04685 -4.0 -2.0 DUF126 domain-containing protein compare
MMP_RS01875 -4.0 -4.8 N-acetyltransferase compare
MMP_RS08650 -4.0 -1.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS01755 -4.0 -0.8 DUF2097 domain-containing protein compare
MMP_RS03035 -4.0 -2.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS08790 -4.0 -1.5 translation initiation factor IF-2 subunit alpha compare
MMP_RS06370 -3.9 -2.8 biotin synthase BioB compare
MMP_RS02280 -3.9 -0.5 DUF211 domain-containing protein compare
MMP_RS07755 -3.9 -0.8 DUF555 domain-containing protein compare
MMP_RS04775 -3.9 -1.6 adenosylhomocysteinase compare
MMP_RS06295 -3.8 -5.3 methanogenesis marker 14 protein compare
MMP_RS07875 -3.8 -4.7 hypothetical protein compare
MMP_RS00040 -3.8 -4.7 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS00305 -3.8 -1.2 phosphoribosyl-ATP diphosphatase compare
MMP_RS05845 -3.8 -1.0 tRNA-intron lyase compare
MMP_RS07635 -3.8 -5.7 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01885 -3.8 -3.4 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS05640 -3.7 -6.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01895 -3.7 -11.6 flippase compare
MMP_RS01920 -3.7 -11.0 glycosyltransferase family 2 protein compare
MMP_RS07200 -3.7 -5.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07390 -3.7 -2.0 cell division protein FtsZ compare
MMP_RS08460 -3.7 -1.3 proteasome-activating nucleotidase compare
MMP_RS06925 -3.7 -1.9 ribonuclease VapC4 compare
MMP_RS04900 -3.6 -16.3 hypothetical protein compare
MMP_RS07555 -3.6 -0.5 monovalent cation/H+ antiporter subunit E compare
MMP_RS01880 -3.6 -4.4 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS08370 -3.6 -0.5 cation:proton antiporter subunit C compare
MMP_RS01930 -3.6 -10.4 hypothetical protein compare
MMP_RS03445 -3.6 -0.7 methanogenesis marker 17 protein compare
MMP_RS01385 -3.6 -0.5 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS02135 -3.6 -3.3 DUF5612 domain-containing protein compare
MMP_RS07005 -3.5 -0.5 4Fe-4S binding protein compare
MMP_RS05920 -3.5 -0.5 50S ribosomal protein L37e compare
MMP_RS03475 -3.5 -0.5 hypothetical protein compare
MMP_RS03315 -3.5 -0.8 ferrous iron transport protein A compare
MMP_RS01975 -3.5 -9.2 hypothetical protein compare
MMP_RS08745 -3.5 -4.3 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS05815 -3.5 -2.7 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS01970 -3.4 -9.0 TIGR04279 domain-containing protein compare
MMP_RS01745 -3.4 -3.8 AMP phosphorylase compare
MMP_RS01795 -3.4 -1.1 methanogenesis marker 6 protein compare
MMP_RS02900 -3.4 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS03145 -3.4 -4.9 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS06630 -3.4 -0.7 UPF0058 family protein compare
MMP_RS00515 -3.3 -0.6 DUF655 domain-containing protein compare
MMP_RS00050 -3.3 -5.3 AarF/UbiB family protein compare
MMP_RS05265 -3.3 -1.1 2-isopropylmalate synthase compare
MMP_RS06670 -3.3 -3.3 glucose-6-phosphate isomerase compare
MMP_RS07730 -3.3 -1.0 pyruvate synthase subunit beta compare
MMP_RS01890 -3.2 -1.5 nucleotide sugar dehydrogenase compare
MMP_RS03580 -3.2 -2.3 signal recognition particle-docking protein FtsY compare
MMP_RS05525 -3.2 -4.3 calcium/sodium antiporter compare
MMP_RS05250 -3.2 -1.2 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01945 -3.1 -4.2 DUF4350 domain-containing protein compare
MMP_RS01905 -3.1 -5.6 glycosyltransferase compare
MMP_RS06315 -3.1 -0.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS00325 -3.1 -1.0 RNA-binding protein compare
MMP_RS05515 -3.1 -4.7 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01830 -3.0 -0.8 tRNA-Val compare
MMP_RS01935 -3.0 -5.7 DUF58 domain-containing protein compare
MMP_RS04780 -3.0 -1.2 ribonuclease P compare
MMP_RS01925 -3.0 -2.9 DUF1616 domain-containing protein compare
MMP_RS06980 -3.0 -5.4 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS01700 -3.0 -0.6 dihydroxy-acid dehydratase compare
MMP_RS08720 -3.0 -0.8 4Fe-4S binding protein compare
MMP_RS00115 -3.0 -8.7 radical SAM protein compare
MMP_RS01500 -2.9 -1.7 CBS domain-containing protein compare
MMP_RS03640 -2.9 -2.3 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS03140 -2.9 -9.6 hypothetical protein compare
MMP_RS01610 -2.9 -2.1 hypothetical protein compare
MMP_RS08300 -2.9 -0.7 metal-sulfur cluster assembly factor compare
MMP_RS08635 -2.9 -1.0 UbiA family prenyltransferase compare
MMP_RS06355 -2.8 -1.6 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS00695 -2.8 -0.5 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS04485 -2.8 -12.4 putative beta-lysine N-acetyltransferase compare
MMP_RS03960 -2.8 -0.7 hypothetical protein compare
MMP_RS06900 -2.7 -1.7 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06350 -2.7 -3.3 HesA/MoeB/ThiF family protein compare
MMP_RS03600 -2.7 -1.4 triose-phosphate isomerase compare
MMP_RS00320 -2.6 -1.1 class I SAM-dependent methyltransferase compare
MMP_RS02290 -2.5 -5.8 MBL fold metallo-hydrolase compare
MMP_RS03095 -2.5 -4.8 diphthine synthase compare
MMP_RS08350 -2.5 -0.6 hypothetical protein compare
MMP_RS02245 -2.5 -2.1 hypothetical protein compare
MMP_RS08340 -2.5 -3.2 4Fe-4S binding protein compare
MMP_RS08445 -2.5 -2.8 DUF2099 family protein compare
MMP_RS01900 -2.4 -10.3 hypothetical protein compare
MMP_RS06310 -2.4 -2.8 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS05800 -2.4 -4.3 B12-binding domain-containing radical SAM protein compare
MMP_RS01365 -2.4 -1.6 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS04890 -2.4 -0.5 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS06230 -2.4 -1.9 helix-turn-helix domain-containing protein compare
MMP_RS01950 -2.3 -5.4 hypothetical protein compare
MMP_RS05285 -2.3 -2.8 MMPL family transporter compare
MMP_RS02010 -2.2 -4.4 PHP domain-containing protein compare
MMP_RS07580 -2.2 -1.7 DUF356 domain-containing protein compare
MMP_RS06725 -2.2 -9.0 hypothetical protein compare
MMP_RS08645 -2.2 -3.8 UPF0179 family protein compare
MMP_RS07435 -2.2 -1.3 GMP synthase subunit A compare
MMP_RS08335 -2.2 -4.0 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS00810 -2.2 -5.5 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06340 -2.2 -4.0 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS08890 -2.2 -6.2 glycosyltransferase family 4 protein compare
MMP_RS04585 -2.1 -5.8 AIR synthase related protein compare
MMP_RS03205 -2.1 -0.8 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS00450 -2.1 -1.0 4Fe-4S binding protein compare
MMP_RS06020 -2.1 -2.4 archaeoflavoprotein AfpA compare
MMP_RS06940 -2.1 -2.8 polyprenyl diphosphate synthase compare
MMP_RS07735 -2.0 -0.4 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS07425 -2.0 -4.4 GTP-binding protein compare
MMP_RS06215 -2.0 -1.5 30S ribosomal protein S6e compare
MMP_RS05245 -2.0 -4.1 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS07090 -2.0 -4.8 tRNA (adenine-N1)-methyltransferase compare
MMP_RS01840 -2.0 -4.3 TIGR00289 family protein compare
MMP_RS01380 -2.0 -2.3 PHP domain-containing protein compare
MMP_RS05280 -1.9 -3.4 COG1361 S-layer family protein compare
MMP_RS02800 -1.9 -3.8 nucleotidyltransferase domain-containing protein compare
MMP_RS07420 -1.9 -3.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS02875 -1.8 -6.2 chorismate pyruvate-lyase family protein compare
MMP_RS08605 -1.8 -3.4 flagellar protein E compare
MMP_RS08785 -1.8 -0.7 RNA-protein complex protein Nop10 compare
MMP_RS08570 -1.8 -4.8 coenzyme F420-0:L-glutamate ligase compare
MMP_RS04605 -1.8 -2.5 cobalt ECF transporter T component CbiQ compare
MMP_RS06105 -1.7 -5.2 hydrogenase maturation peptidase HycI compare
MMP_RS00720 -1.7 -3.4 metal-dependent hydrolase compare
MMP_RS04480 -1.7 -6.9 lysine 2 3-aminomutase compare
MMP_RS02145 -1.7 -2.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS01335 -1.7 -1.3 prefoldin subunit beta compare
MMP_RS07545 -1.7 -0.5 HTH domain-containing protein compare
MMP_RS03155 -1.6 -3.0 precorrin-6A reductase compare
MMP_RS00735 -1.6 -1.6 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07695 -1.6 -4.7 DUF3236 domain-containing protein compare
MMP_RS05425 -1.6 -2.3 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00380 -1.6 -2.9 P-II family nitrogen regulator compare
MMP_RS01540 -1.6 -1.6 DUF504 domain-containing protein compare
MMP_RS05555 -1.6 -0.6 DUF4040 domain-containing protein compare
MMP_RS00315 -1.6 -4.2 Nif3-like dinuclear metal center hexameric protein compare


Specific Phenotypes

For 1 genes in this experiment

For nutrient t2 Sodium acetate in Methanococcus maripaludis S2

For nutrient t2 Sodium acetate across organisms