Experiment set3IT036 for Cupriavidus basilensis FW507-4G11

Compare to:

R2A 23C

200 most important genes:

  gene name fitness t score description  
RR42_RS11770 -4.4 -3.0 cyclase compare
RR42_RS05955 -4.1 -1.9 hypothetical protein compare
RR42_RS33255 -3.8 -5.0 protein-tyrosine phosphatase compare
RR42_RS19005 -3.6 -7.6 3-dehydroquinate synthase compare
RR42_RS00715 -3.2 -2.2 ferritin compare
RR42_RS18420 -2.9 -7.8 hypothetical protein compare
RR42_RS07365 -2.7 -3.9 pyruvate dehydrogenase compare
RR42_RS07555 -2.6 -2.9 potassium transporter Kup compare
RR42_RS37400 -2.4 -1.6 6-phosphogluconolactonase compare
RR42_RS12040 -2.4 -10.9 MFS transporter compare
RR42_RS21690 -2.4 -1.6 acetyltransferase compare
RR42_RS06095 -2.3 -5.2 hypothetical protein compare
RR42_RS14360 -2.2 -2.0 tryptophan synthase subunit alpha compare
RR42_RS33260 -2.2 -6.9 multidrug MFS transporter compare
RR42_RS14365 -2.2 -3.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
RR42_RS04700 -2.2 -2.0 ribonuclease G compare
RR42_RS13910 -2.1 -7.5 glutamate racemase compare
RR42_RS19885 -2.1 -2.3 aminoglycoside transporter compare
RR42_RS02810 -2.1 -3.3 acyl-phosphate glycerol 3-phosphate acyltransferase compare
RR42_RS33250 -2.1 -7.8 tyrosine protein kinase compare
RR42_RS17355 -2.0 -1.6 hypothetical protein compare
RR42_RS03080 -1.9 -3.3 recombinase RecA compare
RR42_RS14055 -1.9 -3.6 elongation factor 4 compare
RR42_RS02705 -1.9 -3.3 Holliday junction DNA helicase RuvA compare
RR42_RS09580 -1.9 -1.7 hypothetical protein compare
RR42_RS36450 -1.8 -1.9 acyl dehydratase compare
RR42_RS33235 -1.8 -8.2 GDP-mannose 4,6-dehydratase compare
RR42_RS17720 -1.8 -2.6 sugar kinase compare
RR42_RS04475 -1.7 -9.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
RR42_RS07380 -1.7 -2.5 dihydrolipoamide dehydrogenase compare
RR42_RS17555 -1.7 -1.5 hypothetical protein compare
RR42_RS12925 -1.7 -3.3 ATPase compare
RR42_RS05485 -1.7 -2.8 polynucleotide phosphorylase/polyadenylase compare
RR42_RS04535 -1.7 -5.0 cysteine synthase compare
RR42_RS23650 -1.7 -3.2 flagellar protein compare
RR42_RS05860 -1.7 -3.3 phospho-2-dehydro-3-deoxyheptonate aldolase compare
RR42_RS03095 -1.7 -2.6 succinyl-CoA synthetase subunit beta compare
RR42_RS22940 -1.6 -2.3 TetR family transcriptional regulator compare
RR42_RS04850 -1.6 -2.2 hypothetical protein compare
RR42_RS35805 -1.6 -4.6 chemotaxis protein CheA compare
RR42_RS09085 -1.6 -2.3 C4-dicarboxylate ABC transporter permease compare
RR42_RS33815 -1.6 -1.2 isochorismatase compare
RR42_RS04205 -1.6 -2.4 glycine cleavage system regulatory protein compare
RR42_RS33240 -1.6 -9.8 GDP-L-fucose synthase compare
RR42_RS17060 -1.5 -10.9 histidine kinase compare
RR42_RS33245 -1.5 -7.1 mannose-1-phosphate guanyltransferase compare
RR42_RS06485 -1.5 -6.5 chorismate synthase compare
RR42_RS13040 -1.5 -3.7 iron transporter compare
RR42_RS21220 -1.5 -1.3 iron transporter FeoB compare
RR42_RS15810 -1.4 -2.7 UDP-N-acetylglucosamine 4,6-dehydratase compare
RR42_RS22590 -1.4 -1.4 organic hydroperoxide resistance protein compare
RR42_RS33210 -1.4 -5.1 teichoic acid biosynthesis protein compare
RR42_RS12615 -1.4 -2.8 LexA family transcriptional regulator compare
RR42_RS15795 -1.4 -4.4 spore coat protein compare
RR42_RS04325 -1.4 -2.3 membrane protein compare
RR42_RS00295 -1.4 -6.6 DEAD/DEAH box helicase compare
RR42_RS06255 -1.4 -1.6 lipoprotein compare
RR42_RS31530 -1.4 -2.5 histidine kinase compare
RR42_RS19090 -1.4 -1.6 cytochrome C compare
RR42_RS17055 -1.3 -6.1 LuxR family transcriptional regulator compare
RR42_RS19010 -1.3 -6.1 shikimate kinase compare
RR42_RS15090 -1.3 -4.7 DNA helicase compare
RR42_RS20775 -1.3 -1.0 hypothetical protein compare
RR42_RS13905 -1.3 -3.7 fumarate hydratase compare
RR42_RS01920 -1.3 -3.0 protoheme IX farnesyltransferase compare
RR42_RS18295 -1.2 -7.5 anthranilate synthase component I compare
RR42_RS04460 -1.2 -7.3 chorismate mutase compare
RR42_RS13190 -1.2 -4.0 outer membrane metallopeptidase lipoprotein nlpD compare
RR42_RS04895 -1.2 -6.9 serine/threonine protein phosphatase compare
RR42_RS30765 -1.2 -1.6 tRNA-Arg compare
RR42_RS28850 -1.2 -2.4 transcriptional regulator compare
RR42_RS15785 -1.2 -6.8 glycosyl transferase family 28 compare
RR42_RS02775 -1.2 -2.1 molecular chaperone SurA compare
RR42_RS12975 -1.2 -4.4 haloacid dehalogenase compare
RR42_RS19085 -1.2 -2.0 cytochrome C biogenesis protein ResB compare
RR42_RS35895 -1.2 -2.5 PadR family transcriptional regulator compare
RR42_RS17620 -1.2 -3.9 phosphatidylglycerophosphatase compare
RR42_RS03360 -1.1 -5.5 fructose ABC transporter, ATPase component (FrcA) (from data) compare
RR42_RS03370 -1.1 -2.7 fructose ABC transporter, substrate-binding component (FrcB) (from data) compare
RR42_RS14390 -1.1 -2.7 3-isopropylmalate dehydratase compare
RR42_RS15845 -1.1 -2.4 biotin transporter BioY compare
RR42_RS22230 -1.1 -0.9 hypothetical protein compare
RR42_RS35875 -1.1 -5.3 UDP-galactose-4-epimerase compare
RR42_RS15905 -1.1 -6.6 phosphoenolpyruvate carboxylase compare
RR42_RS00830 -1.1 -5.4 cell division protein FtsN compare
RR42_RS13065 -1.1 -6.4 ribonuclease R compare
RR42_RS13060 -1.1 -4.3 23S rRNA methyltransferase compare
RR42_RS02045 -1.1 -6.9 GTPase compare
RR42_RS15745 -1.1 -4.6 group1 glycosyl transferase compare
RR42_RS35695 -1.1 -2.9 flagellar L-ring protein FlgH compare
RR42_RS17645 -1.1 -5.1 shikimate dehydrogenase compare
RR42_RS15775 -1.1 -3.7 N-acetylneuraminate synthase compare
RR42_RS14755 -1.1 -2.6 hypothetical protein compare
RR42_RS15015 -1.1 -1.0 exodeoxyribonuclease VII small subunit compare
RR42_RS15790 -1.1 -3.6 aminotransferase class III compare
RR42_RS07605 -1.1 -4.4 poly-beta-hydroxybutyrate polymerase compare
RR42_RS07360 -1.1 -2.2 ATPase compare
RR42_RS02870 -1.0 -3.5 RNA helicase compare
RR42_RS07615 -1.0 -1.6 3-ketoacyl-ACP reductase compare
RR42_RS13270 -1.0 -5.1 recombination protein RecR compare
RR42_RS22495 -1.0 -3.1 hypothetical protein compare
RR42_RS18310 -1.0 -0.7 indole-3-glycerol-phosphate synthase compare
RR42_RS01385 -1.0 -2.1 5,10-methylenetetrahydrofolate reductase compare
RR42_RS19750 -1.0 -1.2 MBL fold metallo-hydrolase compare
RR42_RS01775 -1.0 -3.6 glutamate--cysteine ligase compare
RR42_RS28885 -1.0 -3.5 membrane protein compare
RR42_RS13800 -1.0 -3.7 formyltetrahydrofolate deformylase compare
RR42_RS07385 -1.0 -1.5 Phasin (PHA-granule associated protein) compare
RR42_RS15770 -1.0 -3.3 hypothetical protein compare
RR42_RS05125 -0.9 -2.2 malonic semialdehyde reductase compare
RR42_RS31665 -0.9 -3.2 hypothetical protein compare
RR42_RS09015 -0.9 -2.6 trigger factor compare
RR42_RS31330 -0.9 -1.6 LysR family transcriptional regulator compare
RR42_RS12750 -0.9 -3.9 ATPase compare
RR42_RS34610 -0.9 -2.4 hydroxyacid dehydrogenase compare
RR42_RS00600 -0.9 -0.4 DeoR family transcriptional regulator compare
RR42_RS13240 -0.9 -4.0 mannosyltransferase compare
RR42_RS32600 -0.9 -2.7 cytochrome O ubiquinol oxidase subunit II compare
RR42_RS01820 -0.9 -4.2 peptidase S41 compare
RR42_RS17180 -0.9 -5.1 hypothetical protein compare
RR42_RS00555 -0.9 -5.1 cobyric acid synthase compare
RR42_RS21850 -0.9 -2.0 3-oxoadipate enol-lactonase compare
RR42_RS13730 -0.9 -2.4 TetR family transcriptional regulator compare
RR42_RS28140 -0.9 -2.5 hypothetical protein compare
RR42_RS10885 -0.9 -4.4 DNAase compare
RR42_RS06880 -0.9 -1.8 hypothetical protein compare
RR42_RS35825 -0.9 -3.5 flagellar transcriptional regulator FlhD compare
RR42_RS13250 -0.9 -3.6 LacI family transcriptional regulator compare
RR42_RS16675 -0.9 -1.1 hypothetical protein compare
RR42_RS37330 -0.9 -4.0 1,4-D-glucanase compare
RR42_RS22275 -0.9 -1.7 hypothetical protein compare
RR42_RS00760 -0.9 -1.6 hypothetical protein compare
RR42_RS04245 -0.9 -2.0 chemotaxis protein CheY compare
RR42_RS18315 -0.8 -2.9 toxin compare
RR42_RS12015 -0.8 -2.0 dihydrolipoamide acyltransferase compare
RR42_RS05330 -0.8 -2.9 xanthine dehydrogenase compare
RR42_RS15460 -0.8 -3.6 translocation protein TolB compare
RR42_RS09075 -0.8 -4.4 amino acid dehydrogenase compare
RR42_RS34815 -0.8 -2.0 diguanylate cyclase compare
RR42_RS20010 -0.8 -2.4 hypothetical protein compare
RR42_RS18855 -0.8 -1.9 preprotein translocase compare
RR42_RS18815 -0.8 -4.5 cytochrome C compare
RR42_RS15890 -0.8 -4.7 heme biosynthesis protein HemY compare
RR42_RS16950 -0.8 -2.6 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
RR42_RS34395 -0.8 -1.6 hypothetical protein compare
RR42_RS15035 -0.8 -2.4 ZIP zinc transporter compare
RR42_RS20205 -0.8 -2.0 chromosome partitioning protein compare
RR42_RS02890 -0.8 -3.9 4-carboxymuconolactone decarboxylase compare
RR42_RS33215 -0.8 -5.1 transferase compare
RR42_RS22915 -0.8 -3.5 ABC transporter permease compare
RR42_RS24750 -0.8 -2.1 LysR family transcriptional regulator compare
RR42_RS07180 -0.8 -2.5 hypothetical protein compare
RR42_RS03910 -0.8 -1.7 (2Fe-2S)-binding protein compare
RR42_RS14400 -0.8 -3.3 isopropylmalate isomerase compare
RR42_RS00725 -0.8 -2.8 hypothetical protein compare
RR42_RS07295 -0.8 -2.0 LysR family transcriptional regulator compare
RR42_RS10920 -0.8 -1.1 hypothetical protein compare
RR42_RS04405 -0.8 -3.7 cyanophycin synthetase compare
RR42_RS05670 -0.8 -1.5 urease subunit beta compare
RR42_RS17595 -0.8 -1.7 hypothetical protein compare
RR42_RS18850 -0.8 -1.7 preprotein translocase subunit TatC compare
RR42_RS15895 -0.8 -4.3 uroporphyrinogen III methyltransferase compare
RR42_RS22950 -0.8 -3.5 cytochrome C550 compare
RR42_RS03365 -0.8 -2.2 fructose ABC transporter, permease component (FrcC) (from data) compare
RR42_RS12550 -0.8 -2.7 hypothetical protein compare
RR42_RS32585 -0.8 -1.2 cytochrome C oxidase compare
RR42_RS14385 -0.8 -2.8 3-isopropylmalate dehydrogenase compare
RR42_RS13185 -0.8 -4.4 RNA polymerase sigma factor RpoS compare
RR42_RS00800 -0.8 -4.3 histidine kinase compare
RR42_RS35860 -0.8 -3.7 chemotaxis protein CheX compare
RR42_RS13515 -0.8 -2.9 membrane protein compare
RR42_RS09070 -0.8 -3.6 carbohydrate kinase compare
RR42_RS07045 -0.8 -1.6 hypothetical protein compare
RR42_RS14075 -0.8 -3.8 anti-sigma factor compare
RR42_RS10105 -0.7 -2.6 phosphonate ABC transporter compare
RR42_RS13030 -0.7 -5.3 ATP-dependent helicase compare
RR42_RS14915 -0.7 -2.4 hypothetical protein compare
RR42_RS12760 -0.7 -3.7 hypothetical protein compare
RR42_RS23630 -0.7 -2.6 hypothetical protein compare
RR42_RS26935 -0.7 -2.1 farnesyl-diphosphate farnesyltransferase compare
RR42_RS18425 -0.7 -1.2 hypothetical protein compare
RR42_RS20045 -0.7 -3.0 hypothetical protein compare
RR42_RS06020 -0.7 -0.8 Fe-S cluster assembly transcriptional regulator IscR compare
RR42_RS22030 -0.7 -1.1 hypothetical protein compare
RR42_RS22360 -0.7 -1.3 hypothetical protein compare
RR42_RS14810 -0.7 -2.7 DEAD/DEAH box helicase compare
RR42_RS18670 -0.7 -2.0 metal-dependent hydrolase compare
RR42_RS34845 -0.7 -3.4 chemotaxis protein compare
RR42_RS00510 -0.7 -2.0 transcriptional regulator compare
RR42_RS35790 -0.7 -2.2 chemotaxis protein CheD compare
RR42_RS26905 -0.7 -2.8 methylcrotonoyl-CoA carboxylase compare
RR42_RS22935 -0.7 -1.9 metal transporter compare
RR42_RS35720 -0.7 -1.3 flagellar basal body rod protein FlgC compare
RR42_RS22790 -0.7 -2.3 MmgE/PrpD family protein compare
RR42_RS36700 -0.7 -2.6 multidrug transporter compare
RR42_RS16925 -0.7 -2.4 histidine utilization repressor compare
RR42_RS01195 -0.7 -2.3 excinuclease ATPase compare
RR42_RS06860 -0.7 -0.9 hypothetical protein compare
RR42_RS14965 -0.7 -2.6 hypothetical protein compare
RR42_RS19915 -0.7 -3.6 SPFH domain/Band 7 family protein 2 compare


Specific Phenotypes

For 1 genes in this experiment