Experiment set3IT036 for Cupriavidus basilensis FW507-4G11

Compare to:

R2A 23C

200 most detrimental genes:

  gene name fitness t score description  
RR42_RS03035 +1.3 1.9 membrane protein compare
RR42_RS08185 +1.2 2.8 hypothetical protein compare
RR42_RS06875 +1.2 1.6 hypothetical protein compare
RR42_RS29335 +1.1 3.2 integrase compare
RR42_RS25600 +1.1 2.6 AraC family transcriptional regulator compare
RR42_RS08330 +1.1 1.3 hypothetical protein compare
RR42_RS08575 +1.0 1.3 tail protein compare
RR42_RS37375 +1.0 2.5 short-chain dehydrogenase compare
RR42_RS19685 +1.0 1.3 thiosulfate oxidation carrier complex protein SoxZ compare
RR42_RS35295 +1.0 2.5 diguanylate cyclase compare
RR42_RS04090 +0.9 1.3 type II secretion system protein compare
RR42_RS20310 +0.9 1.2 copper-binding protein compare
RR42_RS27705 +0.8 2.4 NAD-dependent deacetylase compare
RR42_RS07115 +0.8 1.0 hypothetical protein compare
RR42_RS35240 +0.8 2.4 acyl-CoA dehydrogenase compare
RR42_RS21470 +0.8 1.6 hypothetical protein compare
RR42_RS12240 +0.8 0.7 hypothetical protein compare
RR42_RS06845 +0.8 2.0 hypothetical protein compare
RR42_RS26885 +0.8 3.3 peptidase M20 compare
RR42_RS08425 +0.8 1.6 hypothetical protein compare
RR42_RS15640 +0.8 1.0 hypothetical protein compare
RR42_RS15525 +0.8 0.8 hypothetical protein compare
RR42_RS32710 +0.7 1.9 hypothetical protein compare
RR42_RS05810 +0.7 1.3 RNA polymerase sigma factor compare
RR42_RS09995 +0.7 3.0 MBL fold metallo-hydrolase compare
RR42_RS32905 +0.7 1.8 cytosine deaminase compare
RR42_RS28745 +0.7 2.0 hypothetical protein compare
RR42_RS08525 +0.7 2.4 hypothetical protein compare
RR42_RS23870 +0.7 2.2 hypothetical protein compare
RR42_RS29120 +0.7 2.9 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
RR42_RS25710 +0.7 3.0 Clp protease compare
RR42_RS17970 +0.7 1.0 hypothetical protein compare
RR42_RS12345 +0.7 2.2 hypothetical protein compare
RR42_RS04255 +0.7 1.7 chemotaxis protein CheW compare
RR42_RS28195 +0.7 1.6 SAM-dependent methyltransferase compare
RR42_RS02210 +0.7 1.2 succinate dehydrogenase compare
RR42_RS23460 +0.7 1.2 alpha/beta hydrolase compare
RR42_RS27095 +0.7 2.1 hypothetical protein compare
RR42_RS16335 +0.7 1.5 hypothetical protein compare
RR42_RS13685 +0.7 1.9 cupin compare
RR42_RS03670 +0.7 1.6 isochorismatase compare
RR42_RS23205 +0.7 0.9 hypothetical protein compare
RR42_RS16220 +0.7 0.9 DNA polymerase III subunit chi compare
RR42_RS04645 +0.7 1.7 rhodanese superfamily protein compare
RR42_RS26475 +0.7 2.3 Asp/Glu racemase compare
RR42_RS29490 +0.7 1.3 toxin HipA compare
RR42_RS26220 +0.7 1.9 citrate lyase subunit beta compare
RR42_RS05945 +0.6 1.2 thioredoxin compare
RR42_RS13835 +0.6 1.7 hypothetical protein compare
RR42_RS01795 +0.6 4.6 phosphoenolpyruvate-protein phosphotransferase compare
RR42_RS01450 +0.6 2.6 hypothetical protein compare
RR42_RS33690 +0.6 1.0 phosphate acetyltransferase compare
RR42_RS10400 +0.6 1.9 hypothetical protein compare
RR42_RS26430 +0.6 1.7 ferredoxin reductase compare
RR42_RS24215 +0.6 2.6 hypothetical protein compare
RR42_RS17805 +0.6 0.8 hypothetical protein compare
RR42_RS28360 +0.6 2.9 endoribonuclease L-PSP compare
RR42_RS22395 +0.6 2.2 hypothetical protein compare
RR42_RS28005 +0.6 1.3 phosphonate/organophosphate ester transporter subunit compare
RR42_RS35725 +0.6 1.8 flagellar biosynthesis protein FlgB compare
RR42_RS22250 +0.6 1.5 hypothetical protein compare
RR42_RS27725 +0.6 1.4 GntR family transcriptional regulator compare
RR42_RS33375 +0.6 2.2 cupin compare
RR42_RS33850 +0.6 1.4 hypothetical protein compare
RR42_RS30685 +0.6 1.9 hypothetical protein compare
RR42_RS27060 +0.6 1.2 cation transporter compare
RR42_RS31995 +0.6 1.8 flavin reductase compare
RR42_RS28615 +0.6 1.8 ABC transporter substrate-binding protein compare
RR42_RS01785 +0.6 2.0 PTS fructose transporter subunit IIA compare
RR42_RS06325 +0.6 1.3 serine O-acetyltransferase compare
RR42_RS37045 +0.6 0.7 thiamine biosynthesis protein ApbE compare
RR42_RS08280 +0.6 1.4 hypothetical protein compare
RR42_RS01360 +0.6 2.8 phenylacetic acid degradation protein compare
RR42_RS26365 +0.6 1.5 dienelactone hydrolase compare
RR42_RS31735 +0.6 1.4 ABC transporter ATP-binding protein compare
RR42_RS23150 +0.6 2.6 ABC transporter substrate-binding protein compare
RR42_RS06850 +0.6 1.6 hypothetical protein compare
RR42_RS20680 +0.6 1.3 membrane protein compare
RR42_RS08110 +0.6 1.2 hypothetical protein compare
RR42_RS14285 +0.6 2.7 lysine transporter LysE compare
RR42_RS30310 +0.6 0.8 signal transduction protein compare
RR42_RS14660 +0.6 2.2 chromate transporter compare
RR42_RS25120 +0.6 1.8 IclR family transcriptional regulator compare
RR42_RS34565 +0.6 1.6 GDP-mannose mannosyl hydrolase compare
RR42_RS04065 +0.6 2.2 LysR family transcriptional regulator compare
RR42_RS18830 +0.6 3.0 large-conductance mechanosensitive channel compare
RR42_RS32580 +0.6 2.1 GntR family transcriptional regulator compare
RR42_RS32510 +0.6 2.2 nitrate ABC transporter substrate-binding protein compare
RR42_RS28335 +0.6 2.9 ferredoxin compare
RR42_RS16510 +0.6 1.2 hypothetical protein compare
RR42_RS18385 +0.6 1.3 hypothetical protein compare
RR42_RS02150 +0.5 1.1 membrane protein compare
RR42_RS20350 +0.5 1.7 hypothetical protein compare
RR42_RS09300 +0.5 1.3 aromatic ring-opening dioxygenase LigB compare
RR42_RS11680 +0.5 1.1 hypothetical protein compare
RR42_RS22600 +0.5 1.3 heavy metal resistance protein CzcE compare
RR42_RS12425 +0.5 1.8 3-hydroxy-3-methylglutaryl-CoA lyase compare
RR42_RS03820 +0.5 1.8 molybdenum cofactor biosynthesis protein MoaA compare
RR42_RS01500 +0.5 1.4 hypothetical protein compare
RR42_RS14625 +0.5 1.1 formimidoylglutamase compare
RR42_RS32460 +0.5 1.1 LysR family transcriptional regulator compare
RR42_RS06925 +0.5 1.0 hypothetical protein compare
RR42_RS06965 +0.5 1.6 hypothetical protein compare
RR42_RS32445 +0.5 0.9 shikimate dehydrogenase compare
RR42_RS28380 +0.5 1.7 acyl-CoA dehydrogenase compare
RR42_RS20300 +0.5 1.6 MerR family transcriptional regulator compare
RR42_RS25645 +0.5 1.4 hypothetical protein compare
RR42_RS17880 +0.5 0.7 hypothetical protein compare
RR42_RS06570 +0.5 1.9 3-hydroxybutyrate dehydrogenase compare
RR42_RS19485 +0.5 0.8 general secretion pathway protein GspH compare
RR42_RS09555 +0.5 0.8 universal stress protein UspA compare
RR42_RS23420 +0.5 1.2 3-oxoacyl-ACP reductase compare
RR42_RS12515 +0.5 1.8 camphor resistance protein CrcB compare
RR42_RS22810 +0.5 2.2 3-oxoacyl-ACP reductase compare
RR42_RS23485 +0.5 1.8 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase compare
RR42_RS06865 +0.5 1.1 hypothetical protein compare
RR42_RS25595 +0.5 2.3 alpha/beta hydrolase compare
RR42_RS27380 +0.5 2.2 4-aminobutyrate aminotransferase compare
RR42_RS37110 +0.5 2.0 hypothetical protein compare
RR42_RS22640 +0.5 2.2 CAAX amino protease compare
RR42_RS22700 +0.5 2.8 phasin compare
RR42_RS32975 +0.5 1.0 LysR family transcriptional regulator compare
RR42_RS32555 +0.5 1.3 nitrilotriacetate monooxygenase compare
RR42_RS31190 +0.5 2.4 3-ketoacyl-ACP reductase compare
RR42_RS34605 +0.5 1.2 hypothetical protein compare
RR42_RS34585 +0.5 1.0 LysR family transcriptional regulator compare
RR42_RS16460 +0.5 1.3 cupin compare
RR42_RS03525 +0.5 1.3 type VI secretion system effector compare
RR42_RS10150 +0.5 1.2 hypothetical protein compare
RR42_RS30280 +0.5 1.8 alpha/beta hydrolase compare
RR42_RS18725 +0.5 1.1 hypothetical protein compare
RR42_RS05060 +0.5 2.3 hypothetical protein compare
RR42_RS02590 +0.5 1.3 amino acid ABC transporter ATP-binding protein compare
RR42_RS26370 +0.5 1.3 tautomerase compare
RR42_RS13620 +0.5 0.6 ferredoxin compare
RR42_RS11635 +0.5 1.8 signal transduction protein compare
RR42_RS13365 +0.5 0.8 peptidase P60 compare
RR42_RS33440 +0.5 1.5 LysR family transcriptional regulator compare
RR42_RS08240 +0.5 1.4 DNA-binding protein compare
RR42_RS32965 +0.5 1.9 salicylaldehyde dehydrogenase compare
RR42_RS00345 +0.5 0.8 LysR family transcriptional regulator compare
RR42_RS27865 +0.5 2.2 transcriptional regulator compare
RR42_RS23520 +0.5 1.4 thioesterase compare
RR42_RS10510 +0.5 2.0 dihydrofolate reductase compare
RR42_RS05085 +0.5 1.5 2-aminomuconate deaminase compare
RR42_RS15540 +0.5 3.1 hypothetical protein compare
RR42_RS04600 +0.5 2.3 LysR family transcriptional regulator compare
RR42_RS25280 +0.5 2.0 3-hydroxy-3-methylglutaryl-CoA lyase compare
RR42_RS19795 +0.5 1.6 GntR family transcriptional regulator compare
RR42_RS12085 +0.5 1.3 glyoxalase compare
RR42_RS06250 +0.5 0.5 dihydrodipicolinate synthase compare
RR42_RS12155 +0.5 1.0 molecular chaperone compare
RR42_RS32770 +0.5 1.2 transglycosylase compare
RR42_RS20700 +0.5 1.5 GMC family oxidoreductase compare
RR42_RS06990 +0.5 2.2 hypothetical protein compare
RR42_RS26640 +0.5 2.1 2-keto-3-deoxy-L-rhamnonate aldolase compare
RR42_RS23335 +0.5 1.7 hypothetical protein compare
RR42_RS19720 +0.5 0.9 cytochrome C553 compare
RR42_RS11210 +0.5 1.9 microcystin LR degradation protein MlrC compare
RR42_RS28370 +0.5 2.4 CoA-binding protein compare
RR42_RS16780 +0.5 1.4 hypothetical protein compare
RR42_RS23410 +0.4 2.2 hypothetical protein compare
RR42_RS05895 +0.4 1.2 rhombosortase compare
RR42_RS11180 +0.4 2.0 peptidylprolyl isomerase compare
RR42_RS32685 +0.4 2.3 phenol hydroxylase compare
RR42_RS08470 +0.4 0.7 hypothetical protein compare
RR42_RS35360 +0.4 1.7 copper resistance protein CopC compare
RR42_RS32630 +0.4 1.9 acetaldehyde dehydrogenase compare
RR42_RS27530 +0.4 1.6 hypothetical protein compare
RR42_RS32890 +0.4 2.0 ABC transporter permease compare
RR42_RS36360 +0.4 1.3 pyridine nucleotide-disulfide oxidoreductase compare
RR42_RS07095 +0.4 2.0 hypothetical protein compare
RR42_RS14910 +0.4 1.8 peptidylprolyl isomerase compare
RR42_RS01210 +0.4 1.7 n-acetyl-gamma-glutamyl-phosphate reductase compare
RR42_RS34275 +0.4 1.5 virulence protein compare
RR42_RS08405 +0.4 1.1 chitinase compare
RR42_RS11595 +0.4 1.7 hypothetical protein compare
RR42_RS16350 +0.4 1.1 hypothetical protein compare
RR42_RS17800 +0.4 2.3 mercuric reductase compare
RR42_RS16930 +0.4 1.2 sulfonate ABC transporter ATP-binding protein compare
RR42_RS25720 +0.4 1.6 hypothetical protein compare
RR42_RS13595 +0.4 1.6 hypothetical protein compare
RR42_RS06750 +0.4 1.3 hypothetical protein compare
RR42_RS06805 +0.4 0.8 hypothetical protein compare
RR42_RS09675 +0.4 2.0 hypothetical protein compare
RR42_RS06930 +0.4 0.9 hypothetical protein compare
RR42_RS02465 +0.4 1.7 membrane protein compare
RR42_RS28200 +0.4 1.7 membrane protein compare
RR42_RS20790 +0.4 0.9 isoprenylcysteine carboxyl methyltransferase compare
RR42_RS16445 +0.4 1.5 hypothetical protein compare
RR42_RS03630 +0.4 0.7 cold-shock protein compare
RR42_RS15675 +0.4 1.6 heat-shock protein HslJ compare
RR42_RS36840 +0.4 2.5 hydrolase compare
RR42_RS16535 +0.4 1.0 hypothetical protein compare
RR42_RS06775 +0.4 2.1 hypothetical protein compare
RR42_RS17775 +0.4 1.5 Fe(II)-dependent oxygenase compare
RR42_RS12575 +0.4 2.4 inorganic phosphate transporter compare
RR42_RS37180 +0.4 2.7 hypothetical protein compare
RR42_RS01535 +0.4 1.3 3-isopropylmalate dehydratase compare
RR42_RS13635 +0.4 2.3 ABC transporter substrate-binding protein compare


Specific Phenotypes

For 1 genes in this experiment