Experiment set3IT036 for Caulobacter crescentus NA1000

Compare to:

PYE with Sodium Chlorate 40 mM

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01712 +2.4 19.6 CopY/TcrY family transcriptional repressor compare
CCNA_02957 +2.2 8.7 ArsR-family transcriptional regulator compare
CCNA_02103 +2.2 13.2 hypothetical protein compare
CCNA_00521 +2.2 3.5 antitoxin protein compare
CCNA_R0037 +2.1 10.6 tRNA-Glu compare
CCNA_01526 +2.1 8.3 flagellar biosynthesis regulatory protein flaF compare
CCNA_01790 +2.0 7.4 protein translocase subunit secG compare
CCNA_02646 +2.0 4.0 cell division protein MraZ compare
CCNA_01722 +2.0 7.4 hypothetical protein compare
CCNA_01814 +1.9 12.7 nitrogen regulation protein ntrB compare
CCNA_00699 +1.9 9.9 LSU ribosomal protein L28P compare
CCNA_01979 +1.9 10.5 LexA repressor compare
CCNA_01964 +1.9 8.3 NADH dehydrogenase compare
CCNA_03030 +1.9 11.9 cytochrome c2 compare
CCNA_01739 +1.9 9.6 LSU ribosomal protein L9P compare
CCNA_01801 +1.9 8.8 hypothetical protein compare
CCNA_01840 +1.9 14.1 MerR-family transcriptional regulator compare
CCNA_03252 +1.9 13.9 CopY/TcrY-family transcriptional regulator compare
CCNA_01851 +1.8 13.6 quinol cytochrome oxidase polypeptide II compare
CCNA_03281 +1.8 14.6 AsnC-family transcriptional regulator compare
CCNA_00939 +1.8 7.5 MarR-family transcriptional regulator compare
CCNA_01186 +1.8 8.0 hypothetical protein compare
CCNA_01959 +1.8 4.7 3-dehydroquinate dehydratase compare
CCNA_01059 +1.8 14.4 S-layer protein rsaA compare
CCNA_03064 +1.8 10.8 PadR-family transcriptional regulator compare
CCNA_03893 +1.8 5.1 hypothetical protein compare
CCNA_01942 +1.8 7.6 Rrf2 family protein compare
CCNA_02910 +1.8 14.4 TonB-dependent receptor compare
CCNA_02416 +1.8 8.8 DNA-binding protein HU compare
CCNA_01931 +1.8 10.6 TetR-family transcriptional regulator compare
CCNA_01802 +1.8 4.1 hypothetical protein compare
CCNA_01242 +1.7 13.1 amino acid permease compare
CCNA_01684 +1.7 9.5 phenylalanine-4-hydroxylase compare
CCNA_02980 +1.7 12.1 tryptophan 2,3-dioxygenase compare
CCNA_03936 +1.7 9.1 hypothetical protein compare
CCNA_02289 +1.7 12.7 MarR/EmrR family transcriptional regulator compare
CCNA_03012 +1.7 10.9 peroxiredoxin compare
CCNA_00769 +1.7 8.4 TetR family transcriptional regulator compare
CCNA_02025 +1.7 6.7 hypothetical protein compare
CCNA_03913 +1.7 2.2 hypothetical protein compare
CCNA_03287 +1.7 11.4 PadR-family transcriptional regulator compare
CCNA_01751 +1.7 7.6 aminodeoxychorismate lyase compare
CCNA_03289 +1.7 9.5 HicB-family RNA-binding protein compare
CCNA_00518 +1.7 10.2 LSU ribosomal protein L25P compare
CCNA_01968 +1.7 5.3 pentapeptide repeats containing protein compare
CCNA_02004 +1.7 3.8 SOS-induced inhibitor of cell division SidA compare
CCNA_01094 +1.7 4.1 hypothetical protein compare
CCNA_00924 +1.7 10.7 MarR/EmrR family transcriptional regulator compare
CCNA_01578 +1.7 8.9 beta-lactamase repressor compare
CCNA_02000 +1.7 3.3 SSU ribosomal protein S2P compare
CCNA_01913 +1.6 11.1 MarR-family transcriptional regulator compare
CCNA_01730 +1.6 9.3 amidophosphoribosyltransferase compare
CCNA_03280 +1.6 14.4 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_03043 +1.6 6.3 type IV pilin protein pilA compare
CCNA_01433 +1.6 3.9 integration host factor alpha-subunit compare
CCNA_01573 +1.6 8.0 ArsR-family transcriptional regulator compare
CCNA_01361 +1.6 3.8 PepSY superfamily protein compare
CCNA_00962 +1.6 9.5 MarR-family transcriptional regulator compare
CCNA_00954 +1.6 11.9 AAA-family response regulator flbD compare
CCNA_01849 +1.6 9.2 quinol cytochrome oxidase polypeptide III compare
CCNA_03989 +1.6 12.4 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_01420 +1.6 9.3 NrdR family transcriptional regulator compare
CCNA_02419 +1.6 5.9 TonB1 protein compare
CCNA_02225 +1.6 9.8 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_03918 +1.6 2.3 hypothetical protein compare
CCNA_02021 +1.6 7.0 hypothetical protein compare
CCNA_R0054 +1.6 3.6 tRNA-Gly compare
CCNA_01848 +1.6 9.6 quinol cytochrome oxidase polypeptide IV compare
CCNA_03271 +1.6 11.3 methionine gamma-lyase compare
CCNA_01525 +1.6 8.0 flagellar biosynthesis repressor flbT compare
CCNA_01690 +1.6 5.2 MAPEG family membrane protein compare
CCNA_03951 +1.6 7.2 hypothetical protein compare
CCNA_01058 +1.6 9.9 helix-turn-helix transcriptional regulator compare
CCNA_02026 +1.6 7.2 hypothetical protein compare
CCNA_02328 +1.5 1.3 cell cycle regulatory protein GcrA compare
CCNA_02042 +1.5 9.9 trigger factor chaperone compare
CCNA_03123 +1.5 9.8 ArsR-family transcriptional regulator compare
CCNA_03325 +1.5 6.6 hypothetical protein compare
CCNA_03961 +1.5 6.0 hypothetical protein compare
CCNA_02448 +1.5 9.4 hypothetical protein compare
CCNA_03379 +1.5 4.0 Cro/CI family transcriptional regulator compare
CCNA_01815 +1.5 9.7 nitrogen assimilation regulatory protein NtrC compare
CCNA_02644 +1.5 4.1 cell division protein FtsL compare
CCNA_00161 +1.5 9.7 hypothetical protein compare
CCNA_03519 +1.5 5.9 PadR-family transcriptional regulator compare
CCNA_02242 +1.5 9.5 PHB granule-associated protein, phasin2 compare
CCNA_03612 +1.5 9.7 HTH XRE-family transcriptional regulator compare
CCNA_00781 +1.5 10.9 two-component receiver protein CpdR compare
CCNA_02617 +1.5 11.5 histidinol-phosphate aminotransferase compare
CCNA_02447 +1.5 9.1 PspA/IM30 family regulatory protein compare
CCNA_03643 +1.5 2.0 succinate dehydrogenase membrane anchor subunit compare
CCNA_00998 +1.5 7.8 ROS/MUCR transcriptional regulator compare
CCNA_01679 +1.5 8.2 succinylglutamic semialdehyde dehydrogenase compare
CCNA_02030 +1.5 6.6 hypothetical protein compare
CCNA_00162 +1.5 7.8 hypothetical protein compare
CCNA_01393 +1.5 10.5 soluble lytic murein transglycosylase compare
CCNA_00032 +1.4 4.9 antitoxin protein VapB compare
CCNA_01804 +1.4 8.8 glutathione peroxidase compare
CCNA_02133 +1.4 7.1 glucokinase compare
CCNA_02575 +1.4 3.5 hypothetical protein compare
CCNA_01181 +1.4 8.0 hypothetical protein compare
CCNA_03938 +1.4 4.6 hypothetical protein compare
CCNA_03479 +1.4 7.9 MarR-family transcriptional regulator compare
CCNA_00947 +1.4 10.7 flagellar hook protein FlgE compare
CCNA_02081 +1.4 5.9 Sec-independent protein translocase protein tatB compare
CCNA_01850 +1.4 11.4 quinol cytochrome oxidase polypeptide I compare
CCNA_01453 +1.4 4.5 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_02339 +1.4 9.2 methyltransferase compare
CCNA_02732 +1.4 3.7 hypothetical protein compare
CCNA_01775 +1.4 5.5 phosphoribosylformylglycinamidine cyclo-ligase compare
CCNA_02942 +1.4 4.1 nucleoside-diphosphate-sugar epimerase compare
CCNA_00950 +1.4 9.6 flagellar M-ring protein FliF compare
CCNA_03108 +1.4 11.2 TonB-dependent outer membrane receptor compare
CCNA_00999 +1.4 5.9 PAS-family motility and cell cycle regulatory protein MopJ compare
CCNA_03129 +1.4 9.1 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_00846 +1.4 12.1 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_00031 +1.4 8.1 toxin protein VapC compare
CCNA_00447 +1.4 7.4 chemotaxis protein cheD compare
CCNA_00944 +1.4 8.0 flagellar hook length determination protein compare
CCNA_02073 +1.4 5.0 cupin domain transcriptional regulator compare
CCNA_01235 +1.4 7.5 AcrR-family transcriptional regulator compare
CCNA_01731 +1.4 5.8 colicin V production protein CvpA compare
CCNA_01780 +1.4 8.7 exopolyphosphatase compare
CCNA_00505 +1.4 5.5 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_02591 +1.4 3.8 glutaredoxin compare
CCNA_02619 +1.4 10.3 stomatin/prohibitin-related protein compare
CCNA_03089 +1.3 7.2 hypothetical protein compare
CCNA_01619 +1.3 7.6 NYN domain protein compare
CCNA_00441 +1.3 7.3 chemotaxis receiver domain protein cheYI compare
CCNA_01541 +1.3 9.5 LysR-family transcriptional regulator compare
CCNA_03954 +1.3 1.7 hypothetical protein compare
CCNA_00952 +1.3 7.6 flagellar assembly protein FlbE/FliH compare
CCNA_01008 +1.3 10.2 urocanate hydratase compare
CCNA_01006 +1.3 4.5 flagellar hook-basal body complex protein FliE compare
CCNA_02063 +1.3 6.6 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_03062 +1.3 8.8 cell wall hydrolase family protein compare
CCNA_01678 +1.3 7.3 arginine N-succinyltransferase, beta chain compare
CCNA_01193 +1.3 9.8 amylosucrase compare
CCNA_00527 +1.3 7.8 hypothetical protein compare
CCNA_01655 +1.3 6.5 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01339 +1.3 6.0 ArsR-family transcriptional regulator compare
CCNA_00920 +1.3 5.0 hypothetical protein compare
CCNA_01324 +1.3 3.9 LSU ribosomal protein L30P compare
CCNA_01742 +1.3 5.3 hypothetical protein compare
CCNA_00354 +1.3 7.3 NlpC/P60 CHAP domain amidase protein compare
CCNA_01063 +1.3 6.8 UDP-perosamine 4-acetyl transferase compare
CCNA_00872 +1.3 4.7 glutaredoxin compare
CCNA_02475 +1.3 8.7 transcriptional regulator vanR compare
CCNA_01413 +1.3 7.7 phosphoglycerate mutase family protein compare
CCNA_00945 +1.3 7.2 chemotaxis protein MotD compare
CCNA_02616 +1.3 8.8 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_02180 +1.3 2.3 iron-sulfur cluster assembly/repair protein ApbC compare
CCNA_02576 +1.3 9.1 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_00027 +1.3 2.5 2OG-Fe(II) oxygenase compare
CCNA_02316 +1.3 6.8 hypothetical protein compare
CCNA_00756 +1.3 3.2 hypothetical protein compare
CCNA_03464 +1.3 6.0 glycine cleavage system H protein compare
CCNA_00919 +1.3 4.9 hypothetical protein compare
CCNA_01593 +1.3 7.6 Xaa-pro aminopeptidase compare
CCNA_00347 +1.3 5.7 hypothetical protein compare
CCNA_01406 +1.2 5.6 metal-dependent hydrolase compare
CCNA_01533 +1.2 6.0 hypothetical protein compare
CCNA_01405 +1.2 4.2 GIY-YIG domain protein compare
CCNA_01681 +1.2 4.0 RimI-like acetyltransferase compare
CCNA_02387 +1.2 9.8 glutathione reductase compare
CCNA_01608 +1.2 5.5 TetR-family transcriptional regulator compare
CCNA_02836 +1.2 5.8 hypothetical protein compare
CCNA_01680 +1.2 7.5 succinylarginine dihydrolase compare
CCNA_01168 +1.2 1.5 3-ketoacyl-CoA thiolase compare
CCNA_02367 +1.2 8.7 CelR-family transcriptional regulator compare
CCNA_00953 +1.2 4.7 flagellar motor switch protein FliN compare
CCNA_01528 +1.2 6.9 flagellin fljK compare
CCNA_01813 +1.2 7.1 tRNA-dihydrouridine synthase compare
CCNA_02134 +1.2 8.9 phosphogluconate dehydratase compare
CCNA_00542 +1.2 4.7 hypothetical protein compare
CCNA_02846 +1.2 8.2 DegP/HtrA-family serine protease compare
CCNA_01412 +1.2 7.7 acyl-CoA dehydrogenase, short-chain specific compare
CCNA_00684 +1.2 7.2 anti-sigma factor, ChrR-family compare
CCNA_02805 +1.2 4.8 hypothetical protein compare
CCNA_00834 +1.2 5.4 flagellin FljM compare
CCNA_03689 +1.2 9.1 alanine dehydrogenase compare
CCNA_02330 +1.2 5.1 hypothetical protein compare
CCNA_00726 +1.2 8.4 acyl-CoA dehydrogenase compare
CCNA_00735 +1.2 3.5 beta-barrel assembly machine (BAM) protein BamF compare
CCNA_03372 +1.2 3.6 bacterioferritin-associated ferredoxin compare
CCNA_01553 +1.2 6.4 undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase compare
CCNA_01116 +1.2 7.6 histidine protein kinase DivJ compare
CCNA_02760 +1.2 3.5 hypothetical protein compare
CCNA_03215 +1.2 7.8 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_01847 +1.2 7.9 cytochrome c oxidase assembly protein Surf1 compare
CCNA_00895 +1.2 7.0 hypothetical protein compare
CCNA_03420 +1.2 7.2 hypothetical protein compare
CCNA_00946 +1.2 6.4 Basal-body rod modification protein FlgD compare
CCNA_03622 +1.2 7.0 beta-lactamase repressor compare
CCNA_00497 +1.1 7.5 putative rhamnosyl transferase compare
CCNA_03384 +1.1 2.9 LSU ribosomal protein L31P compare
CCNA_00444 +1.1 7.2 chemotaxis protein methyltransferase compare
CCNA_00442 +1.1 9.4 chemotaxis histidine kinase protein cheAI compare
CCNA_00352 +1.1 7.8 integral membrane protein compare
CCNA_03518 +1.1 8.3 cytochrome c oxidase polypeptide II coxB compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in stress experiments

For stress Sodium Chlorate across organisms