Experiment set3IT035 for Methanococcus maripaludis JJ

200 most detrimental genes:

gene	name	fitness	t score	description
MMJJ_RS04415		+2.3	10.2	hypothetical protein
MMJJ_RS08830		+1.0	3.5	hypothetical protein
MMJJ_RS04005		+0.9	7.2	acetate--CoA ligase family protein
MMJJ_RS08130		+0.9	1.0	translation initiation factor IF-2 subunit gamma
MMJJ_RS03725		+0.8	2.6	sulfurtransferase TusA family protein
MMJJ_RS07935		+0.6	0.7	protein fwdD
MMJJ_RS04340		+0.5	1.8	hypothetical protein
MMJJ_RS08390		+0.5	1.0	carboxymuconolactone decarboxylase family protein
MMJJ_RS07795		+0.5	2.3	cupin domain-containing protein
MMJJ_RS05685		+0.5	3.2	class III signal peptide-containing protein
MMJJ_RS07240		+0.5	4.3	MBL fold metallo-hydrolase
MMJJ_RS07025		+0.5	2.3	tRNA (cytidine(56)-2'-O)-methyltransferase
MMJJ_RS01100		+0.5	1.1	helix-turn-helix domain-containing protein
MMJJ_RS07235		+0.5	4.1	coenzyme F420 hydrogenase subunit alpha
MMJJ_RS06090		+0.5	3.0	hypothetical protein
MMJJ_RS07205		+0.5	2.6	MTH895/ArsE family thioredoxin-like protein
MMJJ_RS04350		+0.5	2.3	hypothetical protein
MMJJ_RS06675		+0.5	3.4	TIGR01212 family radical SAM protein
MMJJ_RS09405		+0.5	1.4	hypothetical protein
MMJJ_RS08485		+0.5	1.8	Lrp/AsnC family transcriptional regulator
MMJJ_RS05970		+0.4	1.3	MJ0307 family thioredoxin
MMJJ_RS09365		+0.4	1.9	hypothetical protein
MMJJ_RS08520		+0.4	1.4	peptidylprolyl isomerase
MMJJ_RS03835		+0.4	2.7	DUF504 domain-containing protein
MMJJ_RS07220		+0.4	3.3	coenzyme F420 hydrogenase subunit beta
MMJJ_RS03905		+0.4	2.1	ATP-binding cassette domain-containing protein
MMJJ_RS04955		+0.4	2.2	tRNA pseudouridine(54/55) synthase Pus10
MMJJ_RS06190		+0.4	3.3	7-cyano-7-deazaguanine synthase
MMJJ_RS06385		+0.4	1.9	hypothetical protein
MMJJ_RS06515		+0.4	3.0	ribonuclease III
MMJJ_RS06495		+0.4	1.6	hypothetical protein
MMJJ_RS07185		+0.4	1.3	DUF371 domain-containing protein
MMJJ_RS01855		+0.4	2.8	MBL fold metallo-hydrolase
MMJJ_RS06640		+0.4	2.6	YfcE family phosphodiesterase
MMJJ_RS06440		+0.4	2.3	DUF4870 domain-containing protein
MMJJ_RS04480		+0.4	1.1	hypothetical protein
MMJJ_RS05915		+0.3	1.3	multiprotein bridging factor aMBF1
MMJJ_RS06745		+0.3	2.0	energy-coupling factor ABC transporter permease
MMJJ_RS01140		+0.3	2.1	helix-turn-helix domain-containing protein
MMJJ_RS06505		+0.3	1.2	prephenate dehydratase
MMJJ_RS07920		+0.3	2.3	6-carboxytetrahydropterin synthase QueD
MMJJ_RS06540		+0.3	1.3	DUF2120 domain-containing protein
MMJJ_RS07970		+0.3	0.5	O-phospho-L-seryl-tRNA:Cys-tRNA synthase
MMJJ_RS06460		+0.3	2.2	cytochrome c
MMJJ_RS00150		+0.3	2.0	DUF2180 family protein
MMJJ_RS06680		+0.3	1.8	DUF366 family protein
MMJJ_RS08305		+0.3	1.7	peroxiredoxin
MMJJ_RS05525		+0.3	2.0	GTP-binding protein
MMJJ_RS01010		+0.3	3.0	right-handed parallel beta-helix repeat-containing protein
MMJJ_RS00500		+0.3	1.3	GNAT family N-acetyltransferase
MMJJ_RS06470		+0.3	2.4	tripartite tricarboxylate transporter permease
MMJJ_RS06500		+0.3	2.1	class I SAM-dependent methyltransferase
MMJJ_RS06810		+0.3	2.5	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
MMJJ_RS07985		+0.3	1.5	hypothetical protein
MMJJ_RS04105		+0.3	2.5	prepilin peptidase
MMJJ_RS03515		+0.3	1.9	GPR1/FUN34/YaaH family transporter
MMJJ_RS08515		+0.3	1.4	secondary thiamine-phosphate synthase enzyme YjbQ
MMJJ_RS04270		+0.3	1.6	DUF364 domain-containing protein
MMJJ_RS07210		+0.3	2.2	AmmeMemoRadiSam system protein B
MMJJ_RS06685		+0.3	2.4	S-layer protein
MMJJ_RS04215		+0.3	2.3	DMT family transporter
MMJJ_RS03775		+0.3	0.8	50S ribosomal protein L15e
MMJJ_RS07015		+0.3	0.5	PFL family protein
MMJJ_RS06455		+0.3	2.1	YeeE/YedE family protein
MMJJ_RS06590		+0.3	2.2	sodium:alanine symporter family protein
MMJJ_RS08935		+0.3	0.4	TIGR00288 family NYN domain-containing protein
MMJJ_RS06205		+0.3	2.1	EamA family transporter
MMJJ_RS06800		+0.3	1.7	prefoldin subunit alpha
MMJJ_RS03375		+0.3	1.3	hypothetical protein
MMJJ_RS03360		+0.3	0.5	hypothetical protein
MMJJ_RS00145		+0.3	2.1	aquaporin family protein
MMJJ_RS06280		+0.3	2.0	hypothetical protein
MMJJ_RS08310		+0.3	1.5	ZIP family metal transporter
MMJJ_RS08410		+0.3	0.8	CBS domain-containing protein
MMJJ_RS06430		+0.3	1.6	haloacid dehalogenase
MMJJ_RS04635		+0.3	1.8	DUF367 family protein
MMJJ_RS05500		+0.3	2.3	hypothetical protein
MMJJ_RS07230		+0.3	1.7	coenzyme F420-reducing hydrogenase, FrhD protein
MMJJ_RS07495		+0.3	1.7	4Fe-4S binding protein
MMJJ_RS02285		+0.3	1.1	class III signal peptide-containing protein
MMJJ_RS06235		+0.3	2.1	IGHMBP2 family helicase
MMJJ_RS05390		+0.2	1.9	tRNA pseudouridine(13) synthase TruD
MMJJ_RS03605		+0.2	1.3	TIGR00297 family protein
MMJJ_RS06735		+0.2	1.7	cobalt ECF transporter T component CbiQ
MMJJ_RS02355		+0.2	1.7	DUF2798 domain-containing protein
MMJJ_RS03395		+0.2	0.5	hypothetical protein
MMJJ_RS01320		+0.2	1.8	indolepyruvate ferredoxin oxidoreductase subunit alpha
MMJJ_RS03720		+0.2	1.3	DsrE family protein
MMJJ_RS06580		+0.2	1.8	alanine dehydrogenase
MMJJ_RS05405		+0.2	1.8	DNA cytosine methyltransferase
MMJJ_RS09245		+0.2	1.0	hypothetical protein
MMJJ_RS07905		+0.2	1.6	DUF89 domain-containing protein
MMJJ_RS06520		+0.2	1.7	TldD/PmbA family protein
MMJJ_RS06120		+0.2	1.6	DUF4013 domain-containing protein
MMJJ_RS06950		+0.2	1.6	4-demethylwyosine synthase TYW1
MMJJ_RS08165		+0.2	1.6	thermonuclease family protein
MMJJ_RS09360		+0.2	1.7	hypothetical protein
MMJJ_RS07260		+0.2	1.6	PspC domain-containing protein
MMJJ_RS06055		+0.2	1.7	S-methyl-5-thioribose-1-phosphate isomerase
MMJJ_RS09065		+0.2	1.6	hypothetical protein
MMJJ_RS06960		+0.2	2.0	CAP domain-containing protein
MMJJ_RS06790		+0.2	1.9	nucleotidyltransferase family protein
MMJJ_RS06100		+0.2	1.6	rubrerythrin
MMJJ_RS06770		+0.2	1.9	hypothetical protein
MMJJ_RS05990		+0.2	1.4	phosphatase PAP2 family protein
MMJJ_RS06080		+0.2	1.6	serine/threonine protein kinase
MMJJ_RS04625		+0.2	1.6	SLC13 family permease
MMJJ_RS05980		+0.2	1.3	DUF5400 domain-containing protein
MMJJ_RS00730		+0.2	1.4	peptide-methionine (S)-S-oxide reductase MsrA
MMJJ_RS05975		+0.2	1.5	sulfurtransferase TusA family protein
MMJJ_RS07010		+0.2	1.3	preprotein translocase subunit Sec61beta
MMJJ_RS08045		+0.2	1.8	transporter substrate-binding domain-containing protein
MMJJ_RS04390		+0.2	1.7	rhomboid family intramembrane serine protease
MMJJ_RS08180		+0.2	1.3	ABC transporter ATP-binding protein
MMJJ_RS06535		+0.2	1.7	UPF0104 family protein
MMJJ_RS04225		+0.2	1.6	aldo/keto reductase
MMJJ_RS04780		+0.2	1.0	nucleic acid-binding protein
MMJJ_RS09205		+0.2	0.8	hypothetical protein
MMJJ_RS06585		+0.2	1.5	alanine racemase
MMJJ_RS07480		+0.2	1.7	FAD-dependent oxidoreductase
MMJJ_RS05780		+0.2	0.5	flagellin
MMJJ_RS00890		+0.2	1.4	coenzyme F420 hydrogenase subunit gamma
MMJJ_RS08285		+0.2	1.6	class I SAM-dependent methyltransferase
MMJJ_RS01745		+0.2	1.2	metal-dependent transcriptional regulator
MMJJ_RS07215		+0.2	1.7	TIGR00341 family protein
MMJJ_RS06765		+0.2	1.7	hypothetical protein
MMJJ_RS05350		+0.2	1.0	DUF192 domain-containing protein
MMJJ_RS07740		+0.2	1.4	DUF2334 domain-containing protein
MMJJ_RS05700		+0.2	1.4	metallophosphoesterase
MMJJ_RS06045		+0.2	1.2	hypothetical protein
MMJJ_RS07760		+0.2	1.1	GNAT family N-acetyltransferase
MMJJ_RS07695		+0.2	1.7	glycoside hydrolase family 15 protein
MMJJ_RS03040		+0.2	1.3	lactate utilization protein
MMJJ_RS05355		+0.2	1.3	DUF2121 domain-containing protein
MMJJ_RS02270		+0.2	0.9	HEPN domain-containing protein
MMJJ_RS09120		+0.2	0.4	aspartate kinase
MMJJ_RS07385		+0.2	1.3	ribosomal protein S18-alanine N-acetyltransferase
MMJJ_RS01275		+0.2	0.9	4Fe-4S dicluster domain-containing protein
MMJJ_RS08160		+0.2	1.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
MMJJ_RS02265		+0.2	1.4	hypothetical protein
MMJJ_RS00395		+0.2	1.0	DUF473 domain-containing protein
MMJJ_RS08050		+0.2	1.5	ABC transporter substrate-binding protein
MMJJ_RS05660		+0.2	1.2	sulfopyruvate decarboxylase subunit beta
MMJJ_RS04545		+0.2	0.5	PadR family transcriptional regulator
MMJJ_RS06550		+0.2	1.3	ABC transporter permease
MMJJ_RS02665		+0.2	0.4	methyl-accepting chemotaxis protein
MMJJ_RS08580		+0.2	0.8	YkgJ family cysteine cluster protein
MMJJ_RS05005		+0.2	1.3	hypothetical protein
MMJJ_RS07200		+0.2	1.4	MFS transporter
MMJJ_RS05585		+0.2	1.2	hypothetical protein
MMJJ_RS06210		+0.2	1.0	hypothetical protein
MMJJ_RS06710		+0.2	1.4	TldD/PmbA family protein
MMJJ_RS08670		+0.2	1.2	phosphate signaling complex protein PhoU
MMJJ_RS06400		+0.2	0.6	FumA C-terminus/TtdB family hydratase beta subunit
MMJJ_RS05150		+0.2	1.1	5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH
MMJJ_RS05510		+0.2	1.2	archaellum operon transcriptional activator EarA family protein
MMJJ_RS01955		+0.2	1.4	hypothetical protein
MMJJ_RS07820		+0.2	1.3	bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
MMJJ_RS06555		+0.2	1.3	ATP-binding cassette domain-containing protein
MMJJ_RS05965		+0.2	1.3	MFS transporter
MMJJ_RS01825		+0.2	0.9	DNA repair and recombination protein RadB
MMJJ_RS01405		+0.2	0.1	proline--tRNA ligase
MMJJ_RS09295		+0.2	0.2	hypothetical protein
MMJJ_RS06740		+0.2	0.8	energy-coupling factor ABC transporter substrate-binding protein
MMJJ_RS05505		+0.2	1.5	hypothetical protein
MMJJ_RS08375		+0.2	1.1	ferritin
MMJJ_RS07835		+0.2	1.0	UPF0489 family protein
MMJJ_RS00525		+0.2	0.4	Dabb family protein
MMJJ_RS00155		+0.2	1.3	DUF2193 domain-containing protein
MMJJ_RS07255		+0.2	1.3	hypothetical protein
MMJJ_RS03510		+0.2	1.1	acyl-CoA dehydratase activase
MMJJ_RS01035		+0.2	0.7	hypothetical protein
MMJJ_RS04965		+0.2	0.5	RNA polymerase Rpb4 family protein
MMJJ_RS06465		+0.1	0.8	hypothetical protein
MMJJ_RS02230		+0.1	1.2	hypothetical protein
MMJJ_RS07815		+0.1	1.1	2-oxoacid:acceptor oxidoreductase family protein
MMJJ_RS08240		+0.1	1.0	L-fuculose phosphate aldolase
MMJJ_RS02170		+0.1	0.9	2-thiouracil desulfurase family protein
MMJJ_RS08315		+0.1	1.0	DNA protection protein DPS
MMJJ_RS02165		+0.1	1.0	ABC transporter substrate-binding protein
MMJJ_RS03955		+0.1	0.9	hypothetical protein
MMJJ_RS07890		+0.1	0.9	pyrimidine dimer DNA glycosylase/endonuclease V
MMJJ_RS02065		+0.1	1.2	S-layer protein
MMJJ_RS05900		+0.1	1.1	ATP-binding cassette domain-containing protein
MMJJ_RS03595		+0.1	0.7	hypothetical protein
MMJJ_RS09005		+0.1	1.2	N-6 DNA methylase
MMJJ_RS05580		+0.1	0.9	methanogenesis marker 9 domain-containing protein
MMJJ_RS05835		+0.1	1.1	bis-aminopropyl spermidine synthase family protein
MMJJ_RS03545		+0.1	1.1	flagella protein F
MMJJ_RS00405		+0.1	0.8	flavodoxin family protein
MMJJ_RS06275		+0.1	0.7	hypothetical protein
MMJJ_RS07280		+0.1	0.8	phosphomannomutase/phosphoglucomutase
MMJJ_RS01430		+0.1	0.9	hypothetical protein
MMJJ_RS08210		+0.1	1.3	hypothetical protein
MMJJ_RS05335		+0.1	1.0	heavy metal-binding domain-containing protein
MMJJ_RS05410		+0.1	0.8	RecB-family nuclease
MMJJ_RS02895		+0.1	1.0	ATP-binding protein
MMJJ_RS05690		+0.1	1.2	hypothetical protein
MMJJ_RS01910		+0.1	1.1	class III signal peptide-containing protein
MMJJ_RS00680		+0.1	1.1	nitrogenase iron-molybdenum cofactor biosynthesis protein NifE

Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments