Experiment set3IT035 for Dyella japonica UNC79MFTsu3.2

Compare to:

LB with Carbenicillin disodium salt 0.04 mg/ml

200 most important genes:

  gene name fitness t score description  
ABZR86_RS09935 -5.8 -4.0 DUF4105 domain-containing protein compare
ABZR86_RS12885 -4.7 -3.2 magnesium-translocating P-type ATPase compare
ABZR86_RS09885 -3.3 -3.1 trypsin-like peptidase domain-containing protein compare
ABZR86_RS12745 -3.0 -14.7 transglycosylase SLT domain-containing protein compare
ABZR86_RS20775 -3.0 -7.4 TetR/AcrR family transcriptional regulator compare
ABZR86_RS18360 -2.8 -12.5 response regulator transcription factor compare
ABZR86_RS18365 -2.4 -17.1 ATP-binding protein compare
ABZR86_RS13880 -2.4 -2.6 peptide deformylase compare
ABZR86_RS11485 -2.3 -6.7 hypothetical protein compare
ABZR86_RS18585 -2.3 -9.6 polysaccharide biosynthesis/export family protein compare
ABZR86_RS07180 -2.2 -4.7 RNA polymerase sigma factor RpoE compare
ABZR86_RS13515 -2.0 -5.5 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
ABZR86_RS00660 -2.0 -4.5 recombinase RecA compare
ABZR86_RS17210 -2.0 -11.9 TolC family outer membrane protein compare
ABZR86_RS10830 -1.9 -3.3 Holliday junction branch migration DNA helicase RuvB compare
ABZR86_RS07265 -1.8 -5.0 protein phosphatase 2C domain-containing protein compare
ABZR86_RS08250 -1.7 -3.5 phosphate signaling complex protein PhoU compare
ABZR86_RS07160 -1.7 -7.2 signal peptidase I compare
ABZR86_RS08415 -1.6 -2.8 OmpA family protein compare
ABZR86_RS18615 -1.6 -3.0 type I glyceraldehyde-3-phosphate dehydrogenase compare
ABZR86_RS08015 -1.5 -2.0 tRNA pseudouridine(38-40) synthase TruA compare
ABZR86_RS18450 -1.5 -3.1 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha compare
ABZR86_RS11655 -1.5 -6.3 SLC13 family permease compare
ABZR86_RS18545 -1.5 -8.5 hypothetical protein compare
ABZR86_RS05445 -1.5 -2.4 helix-turn-helix domain-containing protein compare
ABZR86_RS18720 -1.4 -2.7 dTDP-4-dehydrorhamnose reductase compare
ABZR86_RS05700 -1.4 -2.7 SsrA-binding protein SmpB compare
ABZR86_RS06030 -1.4 -1.5 transcription termination factor NusA compare
ABZR86_RS11550 -1.4 -5.0 TIGR00645 family protein compare
ABZR86_RS16770 -1.3 -1.4 phage holin family protein compare
ABZR86_RS07665 -1.3 -3.9 exodeoxyribonuclease V subunit beta compare
ABZR86_RS01730 -1.3 -1.8 DUF3820 family protein compare
ABZR86_RS17880 -1.2 -1.3 hypothetical protein compare
ABZR86_RS18675 -1.2 -3.9 phosphoglycerate kinase compare
ABZR86_RS21725 -1.2 -9.5 YhdP family protein compare
ABZR86_RS01755 -1.2 -3.9 helix-turn-helix domain-containing protein compare
ABZR86_RS16525 -1.2 -5.2 alpha/beta fold hydrolase compare
ABZR86_RS05455 -1.2 -5.6 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
ABZR86_RS11735 -1.1 -1.2 large-conductance mechanosensitive channel protein MscL compare
ABZR86_RS09535 -1.1 -1.4 preprotein translocase subunit YajC compare
ABZR86_RS11815 -1.1 -5.5 penicillin-binding protein 1A compare
ABZR86_RS19865 -1.1 -2.5 phosphoribosylformylglycinamidine cyclo-ligase compare
ABZR86_RS18490 -1.1 -2.6 low molecular weight protein-tyrosine-phosphatase compare
ABZR86_RS21335 -1.1 -1.1 response regulator transcription factor compare
ABZR86_RS18600 -1.1 -8.7 YjbH domain-containing protein compare
ABZR86_RS17510 -1.1 -8.3 carboxy terminal-processing peptidase compare
ABZR86_RS16760 -1.1 -1.6 phage tail terminator-like protein compare
ABZR86_RS15025 -1.0 -2.7 tyrosine recombinase XerC compare
ABZR86_RS07340 -1.0 -2.2 tRNA-Leu compare
ABZR86_RS06630 -1.0 -2.5 phosphopyruvate hydratase compare
ABZR86_RS13920 -1.0 -7.3 CDP-glycerol glycerophosphotransferase family protein compare
ABZR86_RS08690 -1.0 -1.8 cupin domain-containing protein compare
ABZR86_RS13915 -1.0 -7.1 glycosyltransferase family 2 protein compare
ABZR86_RS07565 -1.0 -7.8 efflux RND transporter periplasmic adaptor subunit compare
ABZR86_RS11885 -1.0 -2.6 ATP-binding cassette domain-containing protein compare
ABZR86_RS12005 -0.9 -1.1 ribose-5-phosphate isomerase RpiA compare
ABZR86_RS07215 -0.9 -2.5 FKBP-type peptidyl-prolyl cis-trans isomerase compare
ABZR86_RS00580 -0.9 -3.4 protease HtpX compare
ABZR86_RS22135 -0.9 -3.3 hypothetical protein compare
ABZR86_RS13905 -0.9 -6.4 glycosyltransferase family 1 protein compare
ABZR86_RS22190 -0.9 -1.2 hypothetical protein compare
ABZR86_RS20215 -0.9 -2.6 flagellar motor switch protein FliM compare
ABZR86_RS10360 -0.9 -1.2 response regulator compare
ABZR86_RS21320 -0.8 -5.7 ABC transporter permease subunit compare
ABZR86_RS18735 -0.8 -4.1 dTDP-glucose 4,6-dehydratase compare
ABZR86_RS10085 -0.8 -7.8 TonB-dependent receptor compare
ABZR86_RS00310 -0.8 -1.3 AraC family transcriptional regulator compare
ABZR86_RS05335 -0.8 -1.4 hemerythrin domain-containing protein compare
ABZR86_RS13910 -0.8 -6.3 glycosyltransferase compare
ABZR86_RS09660 -0.8 -1.4 MerR family transcriptional regulator compare
ABZR86_RS13430 -0.8 -1.3 DUF4156 domain-containing protein compare
ABZR86_RS13900 -0.8 -2.2 glycosyltransferase compare
ABZR86_RS13380 -0.8 -1.3 Sec-independent protein translocase subunit TatA compare
ABZR86_RS07570 -0.8 -6.1 efflux RND transporter permease subunit compare
ABZR86_RS20860 -0.8 -1.1 transcriptional regulator GcvA compare
ABZR86_RS14930 -0.8 -4.5 exodeoxyribonuclease III compare
ABZR86_RS12595 -0.8 -1.2 cell division ATP-binding protein FtsE compare
ABZR86_RS05690 -0.8 -0.8 RnfH family protein compare
ABZR86_RS21075 -0.8 -1.3 SDR family oxidoreductase compare
ABZR86_RS10355 -0.8 -0.9 chemotaxis protein CheW compare
ABZR86_RS02455 -0.7 -1.4 hypothetical protein compare
ABZR86_RS21340 -0.7 -5.4 sensor histidine kinase compare
ABZR86_RS07310 -0.7 -2.9 tRNA-Val compare
ABZR86_RS12350 -0.7 -1.1 glycine zipper 2TM domain-containing protein compare
ABZR86_RS05545 -0.7 -4.1 glycosyltransferase family 4 protein compare
ABZR86_RS21315 -0.7 -4.9 GldG family protein compare
ABZR86_RS17990 -0.7 -1.4 glutathione S-transferase family protein compare
ABZR86_RS18730 -0.7 -3.3 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR86_RS18715 -0.7 -4.3 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
ABZR86_RS15655 -0.7 -5.9 MFS transporter compare
ABZR86_RS13350 -0.7 -5.4 S41 family peptidase compare
ABZR86_RS20980 -0.7 -1.7 hypothetical protein compare
ABZR86_RS21245 -0.7 -5.2 N-acetylmuramoyl-L-alanine amidase compare
ABZR86_RS02215 -0.7 -1.9 FHA domain-containing protein compare
ABZR86_RS07690 -0.7 -3.2 type IV pilus modification protein PilV compare
ABZR86_RS19645 -0.7 -1.7 hypothetical protein compare
ABZR86_RS14595 -0.7 -1.3 hypothetical protein compare
ABZR86_RS12200 -0.7 -3.4 ribulose-phosphate 3-epimerase compare
ABZR86_RS03730 -0.7 -0.9 VOC family protein compare
ABZR86_RS06940 -0.7 -4.6 hypothetical protein compare
ABZR86_RS18795 -0.7 -1.8 GtrA family protein compare
ABZR86_RS11880 -0.7 -2.1 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
ABZR86_RS10840 -0.7 -1.8 Holliday junction branch migration protein RuvA compare
ABZR86_RS07495 -0.7 -1.3 hypothetical protein compare
ABZR86_RS18960 -0.7 -2.9 TetR/AcrR family transcriptional regulator compare
ABZR86_RS07820 -0.6 -0.9 Spy/CpxP family protein refolding chaperone compare
ABZR86_RS06275 -0.6 -2.5 DUF6165 family protein compare
ABZR86_RS22045 -0.6 -5.3 tetratricopeptide repeat protein compare
ABZR86_RS09380 -0.6 -2.3 response regulator transcription factor compare
ABZR86_RS18595 -0.6 -2.8 capsule biosynthesis GfcC family protein compare
ABZR86_RS12205 -0.6 -3.2 co-chaperone DjlA compare
ABZR86_RS12335 -0.6 -2.7 hypothetical protein compare
ABZR86_RS17425 -0.6 -1.2 16S ribosomal RNA compare
ABZR86_RS19740 -0.6 -4.9 penicillin-binding protein 1B compare
ABZR86_RS09505 -0.6 -3.4 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare
ABZR86_RS18770 -0.6 -3.0 SIS domain-containing protein compare
ABZR86_RS11875 -0.6 -3.7 outer membrane lipid asymmetry maintenance protein MlaD compare
ABZR86_RS02305 -0.6 -1.5 hypothetical protein compare
ABZR86_RS15020 -0.6 -1.0 DUF484 family protein compare
ABZR86_RS08135 -0.6 -1.0 hypothetical protein compare
ABZR86_RS17065 -0.6 -1.4 50S ribosomal protein L11 methyltransferase compare
ABZR86_RS07300 -0.6 -4.1 SurA N-terminal domain-containing protein compare
ABZR86_RS15665 -0.6 -3.7 anhydro-N-acetylmuramic acid kinase compare
ABZR86_RS03130 -0.6 -1.5 ATP/GTP-binding protein compare
ABZR86_RS11870 -0.6 -4.2 phospholipid-binding protein MlaC compare
ABZR86_RS18495 -0.6 -3.2 polysaccharide biosynthesis tyrosine autokinase compare
ABZR86_RS13865 -0.6 -0.7 DNA topoisomerase I compare
ABZR86_RS04380 -0.6 -0.9 universal stress protein compare
ABZR86_RS02245 -0.6 -4.5 excinuclease ABC subunit UvrC compare
ABZR86_RS18780 -0.6 -1.3 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
ABZR86_RS19515 -0.6 -3.6 molybdopterin cofactor-binding domain-containing protein compare
ABZR86_RS09840 -0.6 -0.7 Trm112 family protein compare
ABZR86_RS05050 -0.6 -1.6 energy transducer TonB compare
ABZR86_RS10035 -0.6 -3.4 glycosyltransferase family 2 protein compare
ABZR86_RS09500 -0.6 -3.7 phosphotransferase compare
ABZR86_RS09960 -0.6 -2.4 pilin compare
ABZR86_RS05440 -0.6 -2.0 tetratricopeptide repeat protein compare
ABZR86_RS19245 -0.6 -2.3 glycosyltransferase family 2 protein compare
ABZR86_RS12995 -0.6 -3.2 ankyrin repeat domain-containing protein compare
ABZR86_RS19805 -0.5 -2.4 HPr(Ser) kinase/phosphatase compare
ABZR86_RS19520 -0.5 -2.8 (2Fe-2S)-binding protein compare
ABZR86_RS06270 -0.5 -2.7 glycosyltransferase family 9 protein compare
ABZR86_RS18140 -0.5 -1.0 hypothetical protein compare
ABZR86_RS17905 -0.5 -1.5 DUF6229 family protein compare
ABZR86_RS06265 -0.5 -3.0 3-deoxy-D-manno-octulosonic acid kinase compare
ABZR86_RS14700 -0.5 -2.0 glucose-6-phosphate dehydrogenase compare
ABZR86_RS19710 -0.5 -4.4 glycosyltransferase family 2 protein compare
ABZR86_RS08775 -0.5 -1.5 HAD-IA family hydrolase compare
ABZR86_RS09075 -0.5 -0.7 NrsF family protein compare
ABZR86_RS05500 -0.5 -1.4 trimeric intracellular cation channel family protein compare
ABZR86_RS02255 -0.5 -1.6 tRNA-Gly compare
ABZR86_RS03760 -0.5 -0.9 hypothetical protein compare
ABZR86_RS02415 -0.5 -0.9 hypothetical protein compare
ABZR86_RS19760 -0.5 -1.4 VOC family protein compare
ABZR86_RS18725 -0.5 -1.6 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR86_RS05215 -0.5 -2.3 O-acetyl-ADP-ribose deacetylase compare
ABZR86_RS14085 -0.5 -2.0 hypothetical protein compare
ABZR86_RS07930 -0.5 -1.3 phosphatase PAP2 family protein compare
ABZR86_RS20700 -0.5 -0.7 transcriptional repressor AgaR compare
ABZR86_RS06510 -0.5 -2.1 hypothetical protein compare
ABZR86_RS01455 -0.5 -1.7 efflux RND transporter periplasmic adaptor subunit compare
ABZR86_RS18965 -0.5 -2.0 alpha/beta hydrolase compare
ABZR86_RS15330 -0.5 -3.3 TetR/AcrR family transcriptional regulator compare
ABZR86_RS04825 -0.5 -2.1 NmrA family NAD(P)-binding protein compare
ABZR86_RS00085 -0.5 -1.1 hypothetical protein compare
ABZR86_RS11630 -0.5 -3.2 tRNA-Gly compare
ABZR86_RS12230 -0.5 -3.9 beta-agarase compare
ABZR86_RS05570 -0.5 -2.2 (d)CMP kinase compare
ABZR86_RS19635 -0.5 -0.6 hypothetical protein compare
ABZR86_RS19715 -0.5 -3.3 Dps family protein compare
ABZR86_RS09720 -0.5 -1.7 flagellar basal body rod protein FlgC compare
ABZR86_RS11295 -0.5 -1.6 DUF721 domain-containing protein compare
ABZR86_RS02395 -0.5 -1.4 hypothetical protein compare
ABZR86_RS10655 -0.5 -1.2 GNAT family N-acetyltransferase compare
ABZR86_RS03180 -0.5 -0.7 peptidylprolyl isomerase compare
ABZR86_RS06190 -0.5 -1.0 YceD family protein compare
ABZR86_RS12215 -0.5 -1.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABZR86_RS20905 -0.5 -1.5 nuclear transport factor 2 family protein compare
ABZR86_RS15990 -0.5 -1.1 hypothetical protein compare
ABZR86_RS15650 -0.5 -3.9 exodeoxyribonuclease III compare
ABZR86_RS21325 -0.5 -1.8 ABC transporter ATP-binding protein compare
ABZR86_RS17015 -0.5 -3.8 DNA polymerase I compare
ABZR86_RS07660 -0.5 -2.0 exodeoxyribonuclease V subunit gamma compare
ABZR86_RS18760 -0.5 -3.1 glycosyltransferase compare
ABZR86_RS11710 -0.5 -1.4 ABC transporter permease compare
ABZR86_RS20045 -0.5 -0.9 flagella synthesis protein FlgN compare
ABZR86_RS17810 -0.5 -0.7 hypothetical protein compare
ABZR86_RS02760 -0.5 -3.7 TraB/GumN family protein compare
ABZR86_RS11860 -0.5 -3.5 VacJ family lipoprotein compare
ABZR86_RS11825 -0.5 -1.0 citrate synthase compare
ABZR86_RS08170 -0.5 -1.1 methionine--tRNA ligase compare
ABZR86_RS16965 -0.5 -3.4 DNA helicase II compare
ABZR86_RS05210 -0.5 -1.5 hypothetical protein compare
ABZR86_RS21045 -0.5 -1.8 DoxX family protein compare
ABZR86_RS19355 -0.5 -2.2 DNA-binding transcriptional regulator OxyR compare
ABZR86_RS14955 -0.5 -1.0 low molecular weight protein tyrosine phosphatase family protein compare
ABZR86_RS18655 -0.5 -2.5 transketolase compare
ABZR86_RS06590 -0.4 -1.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABZR86_RS09015 -0.4 -1.7 anti-sigma factor compare
ABZR86_RS09210 -0.4 -2.3 type IV pilus modification protein PilV compare


Specific Phenotypes

For 1 genes in this experiment

For stress Carbenicillin disodium salt in Dyella japonica UNC79MFTsu3.2

For stress Carbenicillin disodium salt across organisms