Experiment set3IT033 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 5g/L bicarb, 40 psi H2CO2

200 most important genes:

  gene name fitness t score description  
MMP_RS07645 -10.1 -4.8 aldehyde dehydrogenase family protein compare
MMP_RS07845 -9.8 -3.4 LL-diaminopimelate aminotransferase compare
MMP_RS06395 -9.1 -3.6 ThiF family adenylyltransferase compare
MMP_RS06350 -9.1 -6.2 HesA/MoeB/ThiF family protein compare
MMP_RS08440 -8.3 -3.6 cell division protein SepF compare
MMP_RS01225 -8.2 -4.8 DUF5379 domain-containing protein compare
MMP_RS00735 -7.8 -3.5 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS08820 -7.8 -6.4 hypothetical protein compare
MMP_RS00915 -7.6 -8.5 DUF116 domain-containing protein compare
MMP_RS00730 -7.6 -6.0 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS01175 -7.5 -5.5 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08435 -7.5 -2.9 Era-like GTP-binding protein compare
MMP_RS06625 -7.5 -2.9 DNA primase compare
MMP_RS04850 -7.4 -25.1 UPF0254 family protein compare
MMP_RS07390 -7.2 -3.5 cell division protein FtsZ compare
MMP_RS08100 -7.2 -8.1 8-amino-7-oxononanoate synthase compare
MMP_RS03015 -7.1 -11.3 GTP 3' 8-cyclase MoaA compare
MMP_RS06355 -7.1 -3.0 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS00810 -7.1 -9.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS00520 -7.1 -2.4 RNA polymerase Rpb4 family protein compare
MMP_RS05930 -7.1 -3.1 3-isopropylmalate dehydratase large subunit compare
MMP_RS00725 -7.1 -9.0 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS04710 -7.0 -2.4 hypothetical protein compare
MMP_RS04500 -7.0 -18.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS08210 -7.0 -2.7 phosphatidylglycerophosphatase A compare
MMP_RS07635 -6.9 -8.2 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS05515 -6.9 -6.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01795 -6.8 -2.3 methanogenesis marker 6 protein compare
MMP_RS07695 -6.8 -7.2 DUF3236 domain-containing protein compare
MMP_RS06105 -6.7 -13.2 hydrogenase maturation peptidase HycI compare
MMP_RS08095 -6.7 -8.1 dethiobiotin synthase compare
MMP_RS07195 -6.6 -8.7 M20 family metallo-hydrolase compare
MMP_RS06400 -6.6 -2.2 4Fe-4S binding protein compare
MMP_RS06370 -6.4 -5.2 biotin synthase BioB compare
MMP_RS02875 -6.4 -11.3 chorismate pyruvate-lyase family protein compare
MMP_RS04685 -6.4 -4.5 DUF126 domain-containing protein compare
MMP_RS05845 -6.2 -2.4 tRNA-intron lyase compare
MMP_RS08195 -6.2 -12.0 hypothetical protein compare
MMP_RS07820 -6.1 -6.0 UPF0104 family protein compare
MMP_RS08650 -6.1 -3.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS01020 -6.1 -1.2 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS00315 -6.1 -7.6 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS00110 -6.0 -3.8 hypothetical protein compare
MMP_RS08320 -6.0 -7.9 molybdopterin molybdotransferase MoeA compare
MMP_RS08745 -6.0 -5.9 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS06885 -6.0 -3.9 50S ribosome-binding GTPase compare
MMP_RS08105 -6.0 -7.5 6-carboxyhexanoate--CoA ligase compare
MMP_RS03400 -6.0 -4.1 archease compare
MMP_RS09020 -5.9 -2.8 hypothetical protein compare
MMP_RS03315 -5.9 -2.0 ferrous iron transport protein A compare
MMP_RS07700 -5.9 -12.6 DUF1188 domain-containing protein compare
MMP_RS03025 -5.8 -8.4 molybdenum cofactor guanylyltransferase compare
MMP_RS01380 -5.8 -4.8 PHP domain-containing protein compare
MMP_RS05265 -5.8 -2.8 2-isopropylmalate synthase compare
MMP_RS06120 -5.8 -2.9 UPF0147 family protein compare
MMP_RS06925 -5.8 -3.4 ribonuclease VapC4 compare
MMP_RS07380 -5.7 -3.5 transcription elongation factor Spt5 compare
MMP_RS06020 -5.7 -6.8 archaeoflavoprotein AfpA compare
MMP_RS07200 -5.7 -9.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07750 -5.7 -7.2 DUF357 domain-containing protein compare
MMP_RS05640 -5.7 -9.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS03435 -5.6 -2.7 ketol-acid reductoisomerase compare
MMP_RS07630 -5.6 -1.9 ATP-binding cassette domain-containing protein compare
MMP_RS04780 -5.6 -3.1 ribonuclease P compare
MMP_RS02240 -5.5 -4.3 methanogenesis marker 7 protein compare
MMP_RS01830 -5.5 -1.5 tRNA-Val compare
MMP_RS00895 -5.5 -5.6 hypothetical protein compare
MMP_RS03580 -5.5 -4.5 signal recognition particle-docking protein FtsY compare
MMP_RS03600 -5.4 -3.2 triose-phosphate isomerase compare
MMP_RS06270 -5.4 -7.7 TIGR00300 family protein compare
MMP_RS02280 -5.4 -1.1 DUF211 domain-containing protein compare
MMP_RS01005 -5.4 -1.5 riboflavin synthase compare
MMP_RS00300 -5.3 -1.0 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS05425 -5.3 -6.4 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00685 -5.2 -6.2 2-phospho-L-lactate guanylyltransferase compare
MMP_RS08715 -5.2 -2.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS03700 -5.2 -14.1 sodium:proton antiporter compare
MMP_RS05440 -5.2 -10.0 winged helix-turn-helix transcriptional regulator compare
MMP_RS08720 -5.1 -2.0 4Fe-4S binding protein compare
MMP_RS06980 -5.1 -10.8 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS07755 -5.1 -1.4 DUF555 domain-containing protein compare
MMP_RS08460 -5.1 -3.2 proteasome-activating nucleotidase compare
MMP_RS03960 -5.1 -1.4 hypothetical protein compare
MMP_RS00305 -5.1 -3.0 phosphoribosyl-ATP diphosphatase compare
MMP_RS08635 -5.0 -2.4 UbiA family prenyltransferase compare
MMP_RS08300 -5.0 -1.7 metal-sulfur cluster assembly factor compare
MMP_RS03475 -5.0 -1.0 hypothetical protein compare
MMP_RS00115 -5.0 -11.0 radical SAM protein compare
MMP_RS05550 -5.0 -1.0 cation:proton antiporter compare
MMP_RS01325 -4.9 -3.0 dihydroneopterin aldolase family protein compare
MMP_RS01220 -4.9 -10.9 hypothetical protein compare
MMP_RS03110 -4.9 -9.2 glycosyltransferase family 2 protein compare
MMP_RS03640 -4.9 -5.2 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07555 -4.9 -1.0 monovalent cation/H+ antiporter subunit E compare
MMP_RS02900 -4.9 -0.9 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01500 -4.8 -3.4 CBS domain-containing protein compare
MMP_RS07005 -4.8 -0.9 4Fe-4S binding protein compare
MMP_RS06895 -4.8 -2.4 selenocysteine-specific translation elongation factor compare
MMP_RS04775 -4.8 -4.7 adenosylhomocysteinase compare
MMP_RS07600 -4.8 -3.2 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06295 -4.8 -8.9 methanogenesis marker 14 protein compare
MMP_RS01725 -4.7 -5.0 class I SAM-dependent methyltransferase family protein compare
MMP_RS08790 -4.7 -3.3 translation initiation factor IF-2 subunit alpha compare
MMP_RS02010 -4.7 -14.0 PHP domain-containing protein compare
MMP_RS02345 -4.7 -5.4 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS06630 -4.7 -1.3 UPF0058 family protein compare
MMP_RS04615 -4.7 -4.0 PDGLE domain-containing protein compare
MMP_RS07730 -4.7 -2.8 pyruvate synthase subunit beta compare
MMP_RS06670 -4.7 -7.0 glucose-6-phosphate isomerase compare
MMP_RS02800 -4.6 -7.2 nucleotidyltransferase domain-containing protein compare
MMP_RS00515 -4.6 -1.3 DUF655 domain-containing protein compare
MMP_RS01800 -4.6 -5.4 TIGR00303 family protein compare
MMP_RS06900 -4.5 -3.8 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06285 -4.5 -3.0 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS03035 -4.5 -5.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS08350 -4.5 -1.2 hypothetical protein compare
MMP_RS03445 -4.4 -1.5 methanogenesis marker 17 protein compare
MMP_RS06230 -4.4 -3.8 helix-turn-helix domain-containing protein compare
MMP_RS07075 -4.4 -5.1 phosphomannomutase/phosphoglucomutase compare
MMP_RS01755 -4.4 -1.7 DUF2097 domain-containing protein compare
MMP_RS08365 -4.4 -5.4 energy conserving hydrogenase EhbF compare
MMP_RS06110 -4.3 -3.6 ATP-dependent protease LonB compare
MMP_RS07580 -4.3 -3.7 DUF356 domain-containing protein compare
MMP_RS03390 -4.3 -8.9 malate dehydrogenase compare
MMP_RS01915 -4.3 -16.7 DUF354 domain-containing protein compare
MMP_RS01865 -4.3 -2.1 GPR1/FUN34/YaaH family transporter compare
MMP_RS08355 -4.3 -7.8 Na(+)/H(+) antiporter subunit B compare
MMP_RS01700 -4.3 -1.2 dihydroxy-acid dehydratase compare
MMP_RS04720 -4.3 -4.6 DedA family protein compare
MMP_RS05250 -4.3 -3.2 NFYB/HAP3 family transcription factor subunit compare
MMP_RS08445 -4.2 -4.5 DUF2099 family protein compare
MMP_RS05555 -4.2 -1.6 DUF4040 domain-containing protein compare
MMP_RS08360 -4.2 -4.7 hypothetical protein compare
MMP_RS06685 -4.1 -13.4 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS01955 -4.1 -2.9 hypothetical protein compare
MMP_RS05815 -4.1 -3.5 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS04890 -4.0 -1.1 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07525 -4.0 -6.8 4Fe-4S binding protein compare
MMP_RS01495 -4.0 -10.8 TraB/GumN family protein compare
MMP_RS01265 -3.9 -2.8 hypothetical protein compare
MMP_RS01335 -3.9 -1.9 prefoldin subunit beta compare
MMP_RS02885 -3.8 -19.8 molybdopterin biosynthesis protein compare
MMP_RS01650 -3.8 -1.0 sulfurtransferase TusA family protein compare
MMP_RS03205 -3.8 -2.1 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS01905 -3.8 -15.5 glycosyltransferase compare
MMP_RS04620 -3.7 -15.3 cobalt transporter CbiM compare
MMP_RS01900 -3.6 -18.7 hypothetical protein compare
MMP_RS02135 -3.6 -5.4 DUF5612 domain-containing protein compare
MMP_RS07330 -3.6 -17.4 membrane protein compare
MMP_RS05635 -3.6 -13.6 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS05925 -3.6 -5.4 small nuclear ribonucleoprotein compare
MMP_RS05500 -3.5 -10.4 2-isopropylmalate synthase compare
MMP_RS01910 -3.5 -12.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS01385 -3.5 -1.0 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS06315 -3.5 -1.3 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS07875 -3.5 -8.2 hypothetical protein compare
MMP_RS01895 -3.4 -13.1 flippase compare
MMP_RS03095 -3.4 -7.6 diphthine synthase compare
MMP_RS06730 -3.4 -2.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS01840 -3.4 -8.1 TIGR00289 family protein compare
MMP_RS02195 -3.4 -3.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01925 -3.4 -8.9 DUF1616 domain-containing protein compare
MMP_RS04605 -3.3 -7.0 cobalt ECF transporter T component CbiQ compare
MMP_RS04870 -3.3 -5.7 TIGR02253 family HAD-type hydrolase compare
MMP_RS01545 -3.3 -1.5 CBS domain-containing protein compare
MMP_RS07445 -3.3 -4.5 helix-turn-helix domain-containing protein compare
MMP_RS02110 -3.2 -2.3 hypothetical protein compare
MMP_RS01890 -3.2 -4.9 nucleotide sugar dehydrogenase compare
MMP_RS04875 -3.2 -5.0 energy-converting hydrogenase B subunit P compare
MMP_RS03155 -3.2 -8.5 precorrin-6A reductase compare
MMP_RS06130 -3.2 -4.7 peptidylprolyl isomerase compare
MMP_RS00695 -3.1 -1.2 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07355 -3.1 -1.2 transcription factor S compare
MMP_RS02145 -3.1 -7.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS05345 -3.1 -7.6 hypothetical protein compare
MMP_RS06725 -3.1 -12.3 hypothetical protein compare
MMP_RS02355 -3.0 -4.3 30S ribosomal protein S27ae compare
MMP_RS01880 -3.0 -8.3 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS07605 -3.0 -4.5 diadenylate cyclase compare
MMP_RS08330 -2.9 -4.3 NADH-quinone oxidoreductase subunit H compare
MMP_RS05920 -2.9 -1.0 50S ribosomal protein L37e compare
MMP_RS07420 -2.9 -4.2 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06475 -2.9 -5.9 FAD-dependent oxidoreductase compare
MMP_RS07425 -2.8 -5.3 GTP-binding protein compare
MMP_RS01610 -2.8 -5.1 hypothetical protein compare
MMP_RS00985 -2.7 -6.6 CDC48 family AAA ATPase compare
MMP_RS08370 -2.7 -0.9 cation:proton antiporter subunit C compare
MMP_RS07545 -2.7 -1.3 HTH domain-containing protein compare
MMP_RS01920 -2.7 -12.2 glycosyltransferase family 2 protein compare
MMP_RS03485 -2.7 -5.3 TIGR00267 family protein compare
MMP_RS01365 -2.7 -3.0 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS06340 -2.7 -8.5 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS07795 -2.7 -10.6 site-2 protease family protein compare
MMP_RS01875 -2.7 -10.5 N-acetyltransferase compare
MMP_RS01775 -2.6 -3.1 TIGR00297 family protein compare
MMP_RS01960 -2.6 -0.7 hypothetical protein compare
MMP_RS04585 -2.6 -12.7 AIR synthase related protein compare
MMP_RS01445 -2.6 -5.2 hypothetical protein compare
MMP_RS07735 -2.6 -1.0 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01885 -2.6 -7.9 Gfo/Idh/MocA family oxidoreductase compare


Specific Phenotypes

For 9 genes in this experiment