Experiment set3IT033 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 5g/L bicarb, 40 psi H2CO2

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS01280 +1.9 15.5 DUF515 domain-containing protein compare
MMP_RS01290 +1.7 13.3 class III signal peptide-containing protein compare
MMP_RS01285 +1.7 12.1 hypothetical protein compare
MMP_RS01305 +1.6 14.1 hypothetical protein compare
MMP_RS01315 +1.6 14.6 DUF2341 domain-containing protein compare
MMP_RS01310 +1.6 12.6 hypothetical protein compare
MMP_RS00240 +1.6 13.4 type II secretion system F family protein compare
MMP_RS01295 +1.5 10.8 hypothetical protein compare
MMP_RS08860 +1.5 9.2 MinD/ParA family protein compare
MMP_RS08855 +1.4 8.9 hypothetical protein compare
MMP_RS00245 +1.4 11.2 type II secretion system F family protein compare
MMP_RS01275 +1.4 7.7 class III signal peptide-containing protein compare
MMP_RS06485 +1.4 2.2 zinc ribbon domain-containing protein compare
MMP_RS07815 +1.3 2.5 DUF2120 domain-containing protein compare
MMP_RS01270 +1.3 8.8 prepilin peptidase compare
MMP_RS00250 +1.1 9.0 Flp pilus assembly complex ATPase component TadA compare
MMP_RS03125 +1.1 6.4 cell division ATPase MinD compare
MMP_RS09045 +0.9 6.0 class III signal peptide-containing protein compare
MMP_RS08675 +0.9 1.4 class III signal peptide-containing protein compare
MMP_RS08845 +0.8 6.0 archaellum operon transcriptional activator EarA family protein compare
MMP_RS06540 +0.8 1.3 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS09055 +0.8 1.1 CAP domain-containing protein compare
MMP_RS01195 +0.8 1.3 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08615 +0.8 1.3 flagellar protein G compare
MMP_RS07415 +0.8 3.5 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS00140 +0.7 2.8 DUF192 domain-containing protein compare
MMP_RS06860 +0.7 1.8 4Fe-4S binding protein compare
MMP_RS06935 +0.7 3.6 protease complex subunit PrcB family protein compare
MMP_RS01300 +0.7 6.2 hypothetical protein compare
MMP_RS08850 +0.7 5.8 hypothetical protein compare
MMP_RS05985 +0.7 2.2 hypothetical protein compare
MMP_RS06555 +0.7 2.1 cupin domain-containing protein compare
MMP_RS05905 +0.7 3.6 undecaprenyl-diphosphate phosphatase compare
MMP_RS05865 +0.6 2.3 hypothetical protein compare
MMP_RS08380 +0.6 2.6 phosphatase PAP2 family protein compare
MMP_RS08750 +0.6 1.6 hypothetical protein compare
MMP_RS07345 +0.6 3.2 glycine synthesis protein GlyXL (from data) compare
MMP_RS06710 +0.6 3.0 selenium-binding protein compare
MMP_RS02170 +0.6 2.6 CBS domain-containing protein compare
MMP_RS08415 +0.6 1.9 radical SAM protein compare
MMP_RS01675 +0.6 1.3 hypothetical protein compare
MMP_RS01085 +0.6 1.3 hypothetical protein compare
MMP_RS08290 +0.6 4.0 DNA-binding protein Alba compare
MMP_RS06115 +0.6 3.8 class II aldolase/adducin family protein compare
MMP_RS03320 +0.6 1.8 metal-dependent transcriptional regulator compare
MMP_RS08455 +0.6 2.5 multiprotein bridging factor aMBF1 compare
MMP_RS02550 +0.6 1.9 helix-turn-helix transcriptional regulator compare
MMP_RS07905 +0.5 1.9 DUF3343 domain-containing protein compare
MMP_RS08830 +0.5 2.7 GTP-binding protein compare
MMP_RS04610 +0.5 1.6 Dabb family protein compare
MMP_RS02415 +0.5 1.4 site-specific integrase compare
MMP_RS07895 +0.5 1.8 cytochrome c compare
MMP_RS08580 +0.5 1.6 flagellin compare
MMP_RS08265 +0.5 2.7 rubrerythrin compare
MMP_RS01110 +0.5 1.7 FmdE family protein compare
MMP_RS05785 +0.5 4.5 ATP-binding protein compare
MMP_RS04410 +0.5 1.9 hypothetical protein compare
MMP_RS04055 +0.5 1.0 hypothetical protein compare
MMP_RS08225 +0.5 2.2 RimK family alpha-L-glutamate ligase compare
MMP_RS01075 +0.5 1.2 hypothetical protein compare
MMP_RS08660 +0.5 2.5 DHH family phosphoesterase compare
MMP_RS08485 +0.5 3.6 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS06930 +0.5 2.7 MBL fold metallo-hydrolase compare
MMP_RS07835 +0.5 1.1 TldD/PmbA family protein compare
MMP_RS03215 +0.5 3.0 MBL fold metallo-hydrolase compare
MMP_RS08090 +0.5 1.6 hypothetical protein compare
MMP_RS06905 +0.5 1.0 hypothetical protein compare
MMP_RS03795 +0.5 2.9 YqhA family protein compare
MMP_RS05660 +0.5 1.9 phosphate ABC transporter substrate-binding protein compare
MMP_RS08500 +0.5 2.4 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS05715 +0.5 2.8 hypothetical protein compare
MMP_RS06520 +0.5 1.7 DUF1786 domain-containing protein compare
MMP_RS08130 +0.4 3.1 IGHMBP2 family helicase compare
MMP_RS08285 +0.4 2.8 serine/threonine protein kinase compare
MMP_RS08070 +0.4 2.5 DUF2096 domain-containing protein compare
MMP_RS02045 +0.4 0.8 tRNA-Met compare
MMP_RS01125 +0.4 2.6 thioredoxin family protein compare
MMP_RS05975 +0.4 0.8 hypothetical protein compare
MMP_RS01570 +0.4 0.8 hypothetical protein compare
MMP_RS07805 +0.4 2.5 ABC transporter permease compare
MMP_RS06100 +0.4 2.8 GNAT family N-acetyltransferase compare
MMP_RS06305 +0.4 3.0 transporter substrate-binding domain-containing protein compare
MMP_RS07840 +0.4 1.3 ribonuclease III compare
MMP_RS08075 +0.4 2.1 DUF749 domain-containing protein compare
MMP_RS09030 +0.4 2.3 hypothetical protein compare
MMP_RS06585 +0.4 0.9 DMT family protein compare
MMP_RS00655 +0.4 1.5 hypothetical protein compare
MMP_RS00690 +0.4 2.2 MBL fold metallo-hydrolase compare
MMP_RS07590 +0.4 3.1 hypothetical protein compare
MMP_RS06190 +0.4 2.6 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS07115 +0.4 1.8 MBL fold metallo-hydrolase compare
MMP_RS08280 +0.4 1.2 proteasome assembly chaperone family protein compare
MMP_RS01685 +0.4 1.3 indolepyruvate oxidoreductase subunit beta compare
MMP_RS05990 +0.4 1.8 DsrE family protein compare
MMP_RS08310 +0.4 0.9 TMEM165/GDT1 family protein compare
MMP_RS07800 +0.4 1.8 ATP-binding cassette domain-containing protein compare
MMP_RS05235 +0.4 2.5 exodeoxyribonuclease III compare
MMP_RS02745 +0.4 1.1 hypothetical protein compare
MMP_RS03755 +0.4 2.8 MarR family transcriptional regulator compare
MMP_RS01450 +0.4 2.2 tRNA pseudouridine(38-40) synthase TruA compare
MMP_RS00535 +0.4 1.3 TIGR00375 family protein compare
MMP_RS01630 +0.4 1.9 N-glycosylase/DNA lyase compare
MMP_RS05130 +0.4 3.1 DUF2226 domain-containing protein compare
MMP_RS08570 +0.3 2.1 coenzyme F420-0:L-glutamate ligase compare
MMP_RS06700 +0.3 2.2 hypothetical protein compare
MMP_RS08160 +0.3 2.3 EamA family transporter compare
MMP_RS07855 +0.3 2.3 class I SAM-dependent methyltransferase compare
MMP_RS06660 +0.3 1.8 glycosyltransferase family 4 protein compare
MMP_RS08260 +0.3 2.4 DUF99 family protein compare
MMP_RS06250 +0.3 2.2 hypothetical protein compare
MMP_RS05780 +0.3 2.5 multidrug resistance efflux transporter family protein compare
MMP_RS05970 +0.3 1.5 class II SORL domain-containing protein compare
MMP_RS06655 +0.3 2.5 glycoside hydrolase family 15 protein compare
MMP_RS04145 +0.3 0.7 hypothetical protein compare
MMP_RS06545 +0.3 1.1 ferredoxin family protein compare
MMP_RS00120 +0.3 1.2 LysR family transcriptional regulator compare
MMP_RS01320 +0.3 2.2 hypothetical protein compare
MMP_RS04125 +0.3 1.9 TetR/AcrR family transcriptional regulator compare
MMP_RS07985 +0.3 2.3 nitroreductase family protein compare
MMP_RS06050 +0.3 2.0 ZIP family metal transporter compare
MMP_RS04100 +0.3 1.3 hypothetical protein compare
MMP_RS00400 +0.3 2.0 tributyrin esterase compare
MMP_RS00530 +0.3 2.1 tRNA pseudouridine(54/55) synthase Pus10 compare
MMP_RS03220 +0.3 1.0 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS01790 +0.3 2.2 restriction endonuclease compare
MMP_RS06990 +0.3 1.8 CatB-related O-acetyltransferase compare
MMP_RS03625 +0.3 2.0 cell wall-binding protein compare
MMP_RS06465 +0.3 2.7 NERD domain-containing protein compare
MMP_RS06440 +0.3 1.2 CBS domain-containing protein compare
MMP_RS00540 +0.3 2.0 PLP-dependent aminotransferase family protein compare
MMP_RS06490 +0.3 1.5 hypothetical protein compare
MMP_RS02295 +0.3 2.0 TatD family hydrolase compare
MMP_RS01255 +0.3 1.6 amino acid ABC transporter ATP-binding protein compare
MMP_RS07715 +0.3 2.4 YfcE family phosphodiesterase compare
MMP_RS05140 +0.3 1.2 helix-turn-helix transcriptional regulator compare
MMP_RS03300 +0.3 0.3 TOBE domain-containing protein compare
MMP_RS07150 +0.3 1.3 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS08395 +0.3 1.4 DsrE family protein compare
MMP_RS06005 +0.3 1.4 heavy-metal-associated domain-containing protein compare
MMP_RS06185 +0.3 1.4 thermonuclease family protein compare
MMP_RS03490 +0.3 0.7 DUF2115 domain-containing protein compare
MMP_RS07640 +0.3 1.5 mechanosensitive ion channel family protein compare
MMP_RS02425 +0.3 1.9 hypothetical protein compare
MMP_RS08980 +0.3 1.2 hypothetical protein compare
MMP_RS06705 +0.3 1.8 formate/nitrite transporter family protein compare
MMP_RS09060 +0.3 2.4 hypothetical protein compare
MMP_RS02530 +0.3 1.7 type II toxin-antitoxin system mRNA interferase toxin RelE/StbE family compare
MMP_RS06225 +0.3 1.3 DNA double-strand break repair nuclease NurA compare
MMP_RS08080 +0.3 1.6 YchF/TatD family DNA exonuclease compare
MMP_RS06445 +0.3 1.7 DUF89 domain-containing protein compare
MMP_RS01635 +0.3 2.0 thiamine pyrophosphate-dependent enzyme compare
MMP_RS05645 +0.3 1.8 AEC family transporter compare
MMP_RS05995 +0.3 2.2 FprA family A-type flavoprotein compare
MMP_RS01135 +0.3 2.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS05315 +0.3 0.6 hypothetical protein compare
MMP_RS02260 +0.3 1.8 lactate utilization protein compare
MMP_RS03685 +0.3 1.8 Mrp/NBP35 family ATP-binding protein compare
MMP_RS08480 +0.3 1.8 molybdate ABC transporter substrate-binding protein compare
MMP_RS08315 +0.3 0.8 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS08385 +0.3 1.4 ABC transporter substrate-binding protein compare
MMP_RS04735 +0.3 1.6 tautomerase family protein compare
MMP_RS08835 +0.3 1.1 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS05435 +0.3 1.5 5'/3'-nucleotidase SurE compare
MMP_RS06145 +0.3 2.4 hypothetical protein compare
MMP_RS05125 +0.3 1.8 D-aminoacyl-tRNA deacylase compare
MMP_RS04190 +0.3 1.5 hypothetical protein compare
MMP_RS08405 +0.3 1.4 MFS transporter compare
MMP_RS06045 +0.3 2.0 DNA polymerase compare
MMP_RS06085 +0.3 2.2 iron ABC transporter substrate-binding protein compare
MMP_RS00085 +0.3 2.1 DNA cytosine methyltransferase compare
MMP_RS06300 +0.3 1.6 ABC transporter substrate-binding protein compare
MMP_RS01260 +0.3 0.9 HDIG domain-containing protein compare
MMP_RS08665 +0.3 2.2 hypothetical protein compare
MMP_RS06280 +0.3 1.3 alpha-glucan family phosphorylase compare
MMP_RS06735 +0.3 1.1 class I SAM-dependent rRNA methyltransferase compare
MMP_RS06910 +0.3 1.4 RlmF-related methyltransferase compare
MMP_RS07595 +0.3 2.0 hypothetical protein compare
MMP_RS06560 +0.3 2.0 hypothetical protein compare
MMP_RS08245 +0.3 1.3 DUF4013 domain-containing protein compare
MMP_RS08390 +0.2 1.2 DUF5400 domain-containing protein compare
MMP_RS08610 +0.2 1.8 flagellar protein F compare
MMP_RS00395 +0.2 0.5 MGMT family protein compare
MMP_RS01680 +0.2 1.7 phenylacetate--CoA ligase compare
MMP_RS02645 +0.2 1.2 ArsR family transcriptional regulator compare
MMP_RS00625 +0.2 0.9 hypothetical protein compare
MMP_RS08685 +0.2 2.0 hypothetical protein compare
MMP_RS08250 +0.2 1.3 pyruvate kinase compare
MMP_RS08325 +0.2 1.6 hypothetical protein compare
MMP_RS08640 +0.2 1.5 TIM barrel protein compare
MMP_RS05155 +0.2 1.2 hypothetical protein compare
MMP_RS03820 +0.2 1.3 EamA family transporter compare
MMP_RS02320 +0.2 1.4 glutamate-cysteine ligase family protein compare
MMP_RS02500 +0.2 1.5 minichromosome maintenance protein MCM compare
MMP_RS03875 +0.2 0.7 hypothetical protein compare
MMP_RS06965 +0.2 1.1 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS07085 +0.2 1.3 ribonuclease HII compare
MMP_RS01055 +0.2 0.9 hypothetical protein compare
MMP_RS02255 +0.2 1.4 hypothetical protein compare
MMP_RS02810 +0.2 1.5 hypothetical protein compare
MMP_RS05020 +0.2 0.7 hypothetical protein compare


Specific Phenotypes

For 9 genes in this experiment